RNA–Protein interactions for RNA: ENST00000566557.5

SCAMP2-208, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-208ENST00000566557 TMEM86BQ8N661 226 aa13.21□□□□□ -0.29
SCAMP2-208ENST00000566557 DCUN1D5Q9BTE7 237 aa13.21□□□□□ -0.29
SCAMP2-208ENST00000566557 ABHD14AQ9BUJ0 271 aa13.21□□□□□ -0.29
SCAMP2-208ENST00000566557 CHIAQ9BZP6 476 aa13.21□□□□□ -0.29
SCAMP2-208ENST00000566557 RBM38Q9H0Z9 239 aaKnown RBP13.21□□□□□ -0.29
SCAMP2-208ENST00000566557 MEGF9Q9H1U4 602 aa13.21□□□□□ -0.29
SCAMP2-208ENST00000566557 AUNIPQ9H7T9 357 aa13.21□□□□□ -0.29
SCAMP2-208ENST00000566557 MRPS7Q9Y2R9 242 aaKnown RBP13.21□□□□□ -0.29
SCAMP2-208ENST00000566557 PKD1L1Q8TDX9 2849 aa13.2□□□□□ -0.3
SCAMP2-208ENST00000566557 MEIS3P1A6NDR6 274 aa13.2□□□□□ -0.3
SCAMP2-208ENST00000566557 SSX5O60225 188 aa13.2□□□□□ -0.3
SCAMP2-208ENST00000566557 FCER2P06734 321 aa13.2□□□□□ -0.3
SCAMP2-208ENST00000566557 RNASE1P07998 156 aaKnown RBP13.2□□□□□ -0.3
SCAMP2-208ENST00000566557 GSTT2P0CG29 244 aa13.2□□□□□ -0.3
SCAMP2-208ENST00000566557 GSTT2BP0CG30 244 aa13.2□□□□□ -0.3
SCAMP2-208ENST00000566557 Q3ZCU0 254 aa13.2□□□□□ -0.3
SCAMP2-208ENST00000566557 LYG1Q8N1E2 194 aa13.2□□□□□ -0.3
SCAMP2-208ENST00000566557 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.2□□□□□ -0.3
SCAMP2-208ENST00000566557 OR2AK2Q8NG84 335 aa13.2□□□□□ -0.3
SCAMP2-208ENST00000566557 OR4A4PQ8NGN8 299 aa13.2□□□□□ -0.3
SCAMP2-208ENST00000566557 OR5R1Q8NH85 324 aa13.2□□□□□ -0.3
SCAMP2-208ENST00000566557 GCDHQ92947 438 aaPredicted RBP13.2□□□□□ -0.3
SCAMP2-208ENST00000566557 C6orf62Q9GZU0 229 aaPredicted RBP13.2□□□□□ -0.3
SCAMP2-208ENST00000566557 VPREB3Q9UKI3 123 aa13.2□□□□□ -0.3
SCAMP2-208ENST00000566557 CLDN34H7C241 214 aa13.19□□□□□ -0.3
SCAMP2-208ENST00000566557 HSD17B6O14756 317 aa13.19□□□□□ -0.3
SCAMP2-208ENST00000566557 YPEL1O60688 119 aa13.19□□□□□ -0.3
SCAMP2-208ENST00000566557 ZBTB25P24278 435 aa13.19□□□□□ -0.3
SCAMP2-208ENST00000566557 CEACAM6P40199 344 aa13.19□□□□□ -0.3
SCAMP2-208ENST00000566557 REG1BP48304 166 aa13.19□□□□□ -0.3
SCAMP2-208ENST00000566557 RAB13P51153 203 aa13.19□□□□□ -0.3
SCAMP2-208ENST00000566557 CT45A1Q5HYN5 189 aa13.19□□□□□ -0.3
SCAMP2-208ENST00000566557 CCDC144NLQ6NUI1 221 aa13.19□□□□□ -0.3
SCAMP2-208ENST00000566557 SLC25A48Q6ZT89 311 aaKnown RBP13.19□□□□□ -0.3
SCAMP2-208ENST00000566557 SNX29P2Q8IUI4 249 aa13.19□□□□□ -0.3
SCAMP2-208ENST00000566557 LINC00311Q8N616 119 aa13.19□□□□□ -0.3
SCAMP2-208ENST00000566557 ZNF439Q8NDP4 499 aa13.19□□□□□ -0.3
SCAMP2-208ENST00000566557 CT45A3Q8NHU0 189 aa13.19□□□□□ -0.3
SCAMP2-208ENST00000566557 CMTM3Q96MX0 182 aa13.19□□□□□ -0.3
SCAMP2-208ENST00000566557 YPEL2Q96QA6 119 aa13.19□□□□□ -0.3
SCAMP2-208ENST00000566557 OCSTAMPQ9BR26 566 aa13.19□□□□□ -0.3
SCAMP2-208ENST00000566557 GINS4Q9BRT9 223 aa13.19□□□□□ -0.3
SCAMP2-208ENST00000566557 IFT46Q9NQC8 304 aa13.19□□□□□ -0.3
SCAMP2-208ENST00000566557 EXTL2Q9UBQ6 330 aa13.19□□□□□ -0.3
SCAMP2-208ENST00000566557 ADAM30Q9UKF2 790 aa13.19□□□□□ -0.3
SCAMP2-208ENST00000566557 IGKV1-6A0A0C4DH72 117 aa13.18□□□□□ -0.3
SCAMP2-208ENST00000566557 ST8SIA5O15466 376 aa13.18□□□□□ -0.3
SCAMP2-208ENST00000566557 GPR137BO60478 399 aa13.18□□□□□ -0.3
SCAMP2-208ENST00000566557 CRYBA1P05813 215 aa13.18□□□□□ -0.3
SCAMP2-208ENST00000566557 LPLP06858 475 aa13.18□□□□□ -0.3
SCAMP2-208ENST00000566557 BRS3P32247 399 aa13.18□□□□□ -0.3
SCAMP2-208ENST00000566557 ARPC4P59998 168 aa13.18□□□□□ -0.3
SCAMP2-208ENST00000566557 DIAPH2-AS1Q14236 149 aa13.18□□□□□ -0.3
SCAMP2-208ENST00000566557 HERPUD1Q15011 391 aa13.18□□□□□ -0.3
SCAMP2-208ENST00000566557 IGSF11Q5DX21 431 aa13.18□□□□□ -0.3
SCAMP2-208ENST00000566557 C16orf87Q6PH81 154 aa13.18□□□□□ -0.3
SCAMP2-208ENST00000566557 LAX1Q8IWV1 398 aa13.18□□□□□ -0.3
SCAMP2-208ENST00000566557 C8orf31Q8N9H6 132 aa13.18□□□□□ -0.3
SCAMP2-208ENST00000566557 OR10J5Q8NHC4 309 aa13.18□□□□□ -0.3
SCAMP2-208ENST00000566557 ZFAND2BQ8WV99 257 aa13.18□□□□□ -0.3
SCAMP2-208ENST00000566557 CABLES2Q9BTV7 478 aa13.18□□□□□ -0.3
SCAMP2-208ENST00000566557 PARP12Q9H0J9 701 aaKnown RBP13.18□□□□□ -0.3
SCAMP2-208ENST00000566557 IGKV1D-8A0A087WSZ0 117 aa13.17□□□□□ -0.3
SCAMP2-208ENST00000566557 FAM181BA6NEQ2 426 aa13.17□□□□□ -0.3
SCAMP2-208ENST00000566557 OOSP1A8MZH6 123 aa13.17□□□□□ -0.3
SCAMP2-208ENST00000566557 LY6LH3BQJ8 138 aa13.17□□□□□ -0.3
SCAMP2-208ENST00000566557 CD24P25063 80 aa13.17□□□□□ -0.3
SCAMP2-208ENST00000566557 RAB7AP51149 207 aa13.17□□□□□ -0.3
SCAMP2-208ENST00000566557 ZNF134P52741 427 aa13.17□□□□□ -0.3
SCAMP2-208ENST00000566557 AANATQ16613 207 aa13.17□□□□□ -0.3
SCAMP2-208ENST00000566557 RNASE12Q5GAN4 147 aaKnown RBP13.17□□□□□ -0.3
SCAMP2-208ENST00000566557 MOB3BQ86TA1 216 aa13.17□□□□□ -0.3
SCAMP2-208ENST00000566557 GVQW1Q8N7I0 195 aa13.17□□□□□ -0.3
SCAMP2-208ENST00000566557 MCFD2Q8NI22 146 aa13.17□□□□□ -0.3
SCAMP2-208ENST00000566557 FAM216AQ8WUB2 273 aa13.17□□□□□ -0.3
SCAMP2-208ENST00000566557 EDARADDQ8WWZ3 215 aa13.17□□□□□ -0.3
SCAMP2-208ENST00000566557 VGLL3A8MV65 326 aa13.16□□□□□ -0.3
SCAMP2-208ENST00000566557 CTDSP2O14595 271 aa13.16□□□□□ -0.3
SCAMP2-208ENST00000566557 TIMM23O14925 209 aa13.16□□□□□ -0.3
SCAMP2-208ENST00000566557 GAPDHP04406 335 aaKnown RBP13.16□□□□□ -0.3
SCAMP2-208ENST00000566557 PRSS3P35030 304 aa13.16□□□□□ -0.3
SCAMP2-208ENST00000566557 CBX5P45973 191 aa13.16□□□□□ -0.3
SCAMP2-208ENST00000566557 SRSF7Q16629 238 aaKnown RBP eCLIP13.16□□□□□ -0.3
SCAMP2-208ENST00000566557 DHRS7BQ6IAN0 325 aaPredicted RBP13.16□□□□□ -0.3
SCAMP2-208ENST00000566557 Q6ZS49 121 aa13.16□□□□□ -0.3
SCAMP2-208ENST00000566557 TMEM219Q86XT9 240 aa13.16□□□□□ -0.3
SCAMP2-208ENST00000566557 TGIF2LXQ8IUE1 241 aa13.16□□□□□ -0.3
SCAMP2-208ENST00000566557 OR8H3Q8N146 312 aa13.16□□□□□ -0.3
SCAMP2-208ENST00000566557 BEST4Q8NFU0 473 aa13.16□□□□□ -0.3
SCAMP2-208ENST00000566557 OR56B4Q8NH76 319 aa13.16□□□□□ -0.3
SCAMP2-208ENST00000566557 CAPSLQ8WWF8 208 aa13.16□□□□□ -0.3
SCAMP2-208ENST00000566557 SLIRPQ9GZT3 109 aaKnown RBP13.16□□□□□ -0.3
SCAMP2-208ENST00000566557 MIXL1Q9H2W2 232 aa13.16□□□□□ -0.3
SCAMP2-208ENST00000566557 RDH8Q9NYR8 311 aa13.16□□□□□ -0.3
SCAMP2-208ENST00000566557 TCF19Q9Y242 345 aa13.16□□□□□ -0.3
SCAMP2-208ENST00000566557 RBM7Q9Y580 266 aaKnown RBP13.16□□□□□ -0.3
SCAMP2-208ENST00000566557 A0A1W2PPI3 338 aa13.15□□□□□ -0.3
SCAMP2-208ENST00000566557 ZNF701M0R085 212 aaPredicted RBP13.15□□□□□ -0.3
SCAMP2-208ENST00000566557 ZNF816Q0VGE8 651 aaPredicted RBP13.15□□□□□ -0.3
SCAMP2-208ENST00000566557 HES1Q14469 280 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms