RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 YY1AP1Q9H869 796 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 RMND5AQ9H871 391 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 SLC25A22Q9H936 323 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 EFCAB1Q9HAE3 211 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 SIAEQ9HAT2 523 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 TMEM165Q9HC07 324 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 DYNLRB1Q9NP97 96 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 RPRD1BQ9NQG5 326 aaKnown RBP0.83□□□□□ -2.28
SMG1-212ENST00000566328 INIPQ9NRY2 104 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 DCAF13Q9NV06 445 aaKnown RBP0.83□□□□□ -2.28
SMG1-212ENST00000566328 TMEM38BQ9NVV0 291 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 MRPL22Q9NWU5 206 aaKnown RBP0.83□□□□□ -2.28
SMG1-212ENST00000566328 PAQR5Q9NXK6 330 aaPredicted RBP0.83□□□□□ -2.28
SMG1-212ENST00000566328 MRPL39Q9NYK5 338 aaKnown RBP0.83□□□□□ -2.28
SMG1-212ENST00000566328 PTTG3PQ9NZH4 202 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 DNAJC27Q9NZQ0 273 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 EMC3Q9P0I2 261 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 PDP1Q9P0J1 537 aaPredicted RBP0.83□□□□□ -2.28
SMG1-212ENST00000566328 P2RX2Q9UBL9 471 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 CD300AQ9UGN4 299 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 TMCC3Q9ULS5 477 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 B9D1Q9UPM9 204 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 AURKCQ9UQB9 309 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 RASD1Q9Y272 281 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 MED31Q9Y3C7 131 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 HDGFL3Q9Y3E1 203 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 RHBDD3Q9Y3P4 386 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 LHFPL6Q9Y693 200 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 ENPP4Q9Y6X5 453 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 DSPPQ9NZW4 1301 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 BIRC6Q9NR09 4857 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 DNAH11Q96DT5 4516 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 NOTCH1P46531 2555 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 MEGF8Q7Z7M0 2845 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 IGLV3-9A0A075B6K5 115 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 ARPC4-TTLL3A0A0A6YYG9 625 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 IGHV1-69-2A0A0G2JMI3 117 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 CENPVL3A0A0U1RRI6 287 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 LOC102725191A0A1B0GVB3 256 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 A0A1W2PPE3 182 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 PRSS37A4D1T9 235 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 RNF222A6NCQ9 220 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 OR6C6A6NF89 314 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 ZNF850A8MQ14 1090 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 HMGB1P1B2RPK0 211 aaPredicted RBP0.82□□□□□ -2.28
SMG1-212ENST00000566328 H7C417 338 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 M0R233 179 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 TNFRSF11BO00300 401 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 FAAHO00519 579 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 CDIPTO14735 213 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 AKR7A2O43488 359 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 CHP2O43745 196 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 OR2T1O43869 369 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 PRKYO43930 277 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 TIMM8AO60220 97 aaPredicted RBP0.82□□□□□ -2.28
SMG1-212ENST00000566328 OR10H3O60404 316 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 RP2O75695 350 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 RPP14O95059 124 aaKnown RBP0.82□□□□□ -2.28
SMG1-212ENST00000566328 VAMP5O95183 116 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 OR5F1O95221 314 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 GOSR1O95249 250 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 RAB36O95755 333 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 AK1P00568 194 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 IGHV2-5P01817 119 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 IFNW1P05000 195 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 MSMBP08118 114 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 CD14P08571 375 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 TACSTD2P09758 323 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 IFI6P09912 130 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 TROVE2P10155 538 aaKnown RBP eCLIP0.82□□□□□ -2.28
SMG1-212ENST00000566328 UQCRBP14927 111 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 CRISP2P16562 243 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 ATP6V1B2P21281 511 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 NPY1RP25929 384 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 FKBP2P26885 142 aaKnown RBP0.82□□□□□ -2.28
SMG1-212ENST00000566328 GTF2E2P29084 291 aaKnown RBP0.82□□□□□ -2.28
SMG1-212ENST00000566328 RRM2P31350 389 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 APLNRP35414 380 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 GLRXP35754 106 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 VHLP40337 213 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 PEX19P40855 299 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 NAA10P41227 235 aaPredicted RBP0.82□□□□□ -2.28
SMG1-212ENST00000566328 CRYBB2P43320 205 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 MAGEA2P43356 314 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 GPR6P46095 362 aaPredicted RBP0.82□□□□□ -2.28
SMG1-212ENST00000566328 GABRA2P47869 451 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 EVX1P49640 407 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 CEBPDP49716 269 aaPredicted RBP0.82□□□□□ -2.28
SMG1-212ENST00000566328 GDI2P50395 445 aaKnown RBP0.82□□□□□ -2.28
SMG1-212ENST00000566328 DAPP51397 102 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 GPM6AP51674 278 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 SNU13P55769 128 aaKnown RBP0.82□□□□□ -2.28
SMG1-212ENST00000566328 TMEM33P57088 247 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 KLF3P57682 345 aaPredicted RBP0.82□□□□□ -2.28
SMG1-212ENST00000566328 FGF12P61328 243 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 NCALDP61601 193 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 BLCAPP62952 87 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 CACNG7P62955 275 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 GNGT1P63211 74 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 PSPHP78330 225 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms