RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 MED22Q15528 200 aa12.29□□□□□ -0.44
CDH3-204ENST00000565453 LIPKQ5VXJ0 399 aa12.29□□□□□ -0.44
CDH3-204ENST00000565453 ZNF880Q6PDB4 577 aa12.29□□□□□ -0.44
CDH3-204ENST00000565453 TMEM91Q6ZNR0 172 aa12.29□□□□□ -0.44
CDH3-204ENST00000565453 ZNF695Q8IW36 515 aa12.29□□□□□ -0.44
CDH3-204ENST00000565453 KCNG3Q8TAE7 436 aa12.29□□□□□ -0.44
CDH3-204ENST00000565453 NABP2Q9BQ15 211 aa12.29□□□□□ -0.44
CDH3-204ENST00000565453 MRPL20Q9BYC9 149 aaKnown RBP12.29□□□□□ -0.44
CDH3-204ENST00000565453 ZNF580Q9UK33 172 aa12.29□□□□□ -0.44
CDH3-204ENST00000565453 BPNT1O95861 308 aa12.28□□□□□ -0.44
CDH3-204ENST00000565453 NAPSAO96009 420 aa12.28□□□□□ -0.44
CDH3-204ENST00000565453 RPLP1P05386 114 aaKnown RBP12.28□□□□□ -0.44
CDH3-204ENST00000565453 MYF6P23409 242 aa12.28□□□□□ -0.44
CDH3-204ENST00000565453 HOXD3P31249 432 aaPredicted RBP12.28□□□□□ -0.44
CDH3-204ENST00000565453 FOXE3Q13461 319 aa12.28□□□□□ -0.44
CDH3-204ENST00000565453 TPBGQ13641 420 aa12.28□□□□□ -0.44
CDH3-204ENST00000565453 LCNL1Q6ZST4 164 aa12.28□□□□□ -0.44
CDH3-204ENST00000565453 ZNF833PQ6ZTB9 187 aa12.28□□□□□ -0.44
CDH3-204ENST00000565453 SVOPQ8N4V2 548 aa12.28□□□□□ -0.44
CDH3-204ENST00000565453 OR6M1Q8NGM8 313 aa12.28□□□□□ -0.44
CDH3-204ENST00000565453 UFD1Q92890 307 aa12.28□□□□□ -0.44
CDH3-204ENST00000565453 GALMQ96C23 342 aa12.28□□□□□ -0.44
CDH3-204ENST00000565453 RITA1Q96K30 269 aa12.28□□□□□ -0.44
CDH3-204ENST00000565453 GON7Q9BXV9 100 aa12.28□□□□□ -0.44
CDH3-204ENST00000565453 IFI27L2Q9H2X8 130 aa12.28□□□□□ -0.44
CDH3-204ENST00000565453 TPRKBQ9Y3C4 175 aa12.28□□□□□ -0.44
CDH3-204ENST00000565453 LRRC42Q9Y546 428 aa12.28□□□□□ -0.44
CDH3-204ENST00000565453 WI2-2373I1.2A0A1W2PRP0 233 aa12.27□□□□□ -0.45
CDH3-204ENST00000565453 RRP9O43818 475 aaKnown RBP12.27□□□□□ -0.45
CDH3-204ENST00000565453 IGHG4P01861 327 aa12.27□□□□□ -0.45
CDH3-204ENST00000565453 IGF1P05019 195 aa12.27□□□□□ -0.45
CDH3-204ENST00000565453 ELANEP08246 267 aa12.27□□□□□ -0.45
CDH3-204ENST00000565453 SOX6P35712 828 aa12.27□□□□□ -0.45
CDH3-204ENST00000565453 OR3A3P47888 321 aa12.27□□□□□ -0.45
CDH3-204ENST00000565453 RPS25P62851 125 aaKnown RBP12.27□□□□□ -0.45
CDH3-204ENST00000565453 TMEM203Q969S6 136 aa12.27□□□□□ -0.45
CDH3-204ENST00000565453 RAX2Q96IS3 184 aa12.27□□□□□ -0.45
CDH3-204ENST00000565453 DUX3Q96PT4 197 aa12.27□□□□□ -0.45
CDH3-204ENST00000565453 ANKRD60Q9BZ19 345 aa12.27□□□□□ -0.45
CDH3-204ENST00000565453 GPR61Q9BZJ8 451 aa12.27□□□□□ -0.45
CDH3-204ENST00000565453 LPAR5Q9H1C0 372 aa12.27□□□□□ -0.45
CDH3-204ENST00000565453 ISYNA1Q9NPH2 558 aa12.27□□□□□ -0.45
CDH3-204ENST00000565453 SAA2-SAA4A0A096LPE2 208 aa12.26□□□□□ -0.45
CDH3-204ENST00000565453 TRBV6-6A0A0A6YYG2 114 aa12.26□□□□□ -0.45
CDH3-204ENST00000565453 FOXI3A8MTJ6 420 aaPredicted RBP12.26□□□□□ -0.45
CDH3-204ENST00000565453 SLC17A2O00624 439 aa12.26□□□□□ -0.45
CDH3-204ENST00000565453 RGS11O94810 467 aa12.26□□□□□ -0.45
CDH3-204ENST00000565453 SAA2P0DJI9 122 aaPredicted RBP12.26□□□□□ -0.45
CDH3-204ENST00000565453 CNTFRP26992 372 aa12.26□□□□□ -0.45
CDH3-204ENST00000565453 BLVRBP30043 206 aaPredicted RBP12.26□□□□□ -0.45
CDH3-204ENST00000565453 CDX1P47902 265 aaPredicted RBP12.26□□□□□ -0.45
CDH3-204ENST00000565453 MMDQ15546 238 aa12.26□□□□□ -0.45
CDH3-204ENST00000565453 CXorf66Q5JRM2 361 aaPredicted RBP12.26□□□□□ -0.45
CDH3-204ENST00000565453 FAM89BQ8N5H3 189 aa12.26□□□□□ -0.45
CDH3-204ENST00000565453 ZNF251Q9BRH9 671 aa12.26□□□□□ -0.45
CDH3-204ENST00000565453 ZNF107Q9UII5 783 aaPredicted RBP12.26□□□□□ -0.45
CDH3-204ENST00000565453 CCL24O00175 119 aa12.25□□□□□ -0.45
CDH3-204ENST00000565453 SOCS1O15524 211 aa12.25□□□□□ -0.45
CDH3-204ENST00000565453 RGS10O43665 173 aa12.25□□□□□ -0.45
CDH3-204ENST00000565453 SLC2A2P11168 524 aaPredicted RBP12.25□□□□□ -0.45
CDH3-204ENST00000565453 CRHBPP24387 322 aa12.25□□□□□ -0.45
CDH3-204ENST00000565453 PSMB8P28062 276 aa12.25□□□□□ -0.45
CDH3-204ENST00000565453 ACTBP60709 375 aa12.25□□□□□ -0.45
CDH3-204ENST00000565453 MLLT11Q13015 90 aaPredicted RBP12.25□□□□□ -0.45
CDH3-204ENST00000565453 KIR2DS1Q14954 304 aa12.25□□□□□ -0.45
CDH3-204ENST00000565453 FAM71F2Q6NXP2 309 aa12.25□□□□□ -0.45
CDH3-204ENST00000565453 OR2AK2Q8NG84 335 aa12.25□□□□□ -0.45
CDH3-204ENST00000565453 MYOZ3Q8TDC0 251 aa12.25□□□□□ -0.45
CDH3-204ENST00000565453 KCTD7Q96MP8 289 aa12.25□□□□□ -0.45
CDH3-204ENST00000565453 MCRIP2Q9BUT9 160 aaKnown RBP12.25□□□□□ -0.45
CDH3-204ENST00000565453 ABRACLQ9P1F3 81 aa12.25□□□□□ -0.45
CDH3-204ENST00000565453 AK6Q9Y3D8 172 aaKnown RBP12.25□□□□□ -0.45
CDH3-204ENST00000565453 ST8SIA5O15466 376 aa12.24□□□□□ -0.45
CDH3-204ENST00000565453 NDUFA3O95167 84 aa12.24□□□□□ -0.45
CDH3-204ENST00000565453 HLA-DRB1P01911 266 aa12.24□□□□□ -0.45
CDH3-204ENST00000565453 HSMCR30P0CW71 290 aa12.24□□□□□ -0.45
CDH3-204ENST00000565453 CPEP16870 476 aa12.24□□□□□ -0.45
CDH3-204ENST00000565453 VDAC1P21796 283 aa12.24□□□□□ -0.45
CDH3-204ENST00000565453 PPIFP30405 207 aaKnown RBP12.24□□□□□ -0.45
CDH3-204ENST00000565453 TMEM50BP56557 158 aa12.24□□□□□ -0.45
CDH3-204ENST00000565453 P2RY14Q15391 338 aa12.24□□□□□ -0.45
CDH3-204ENST00000565453 TRAM1Q15629 374 aa12.24□□□□□ -0.45
CDH3-204ENST00000565453 DEFB136Q30KP8 78 aa12.24□□□□□ -0.45
CDH3-204ENST00000565453 MOB1BQ7L9L4 216 aa12.24□□□□□ -0.45
CDH3-204ENST00000565453 PRSS48Q7RTY5 328 aa12.24□□□□□ -0.45
CDH3-204ENST00000565453 NPBQ8NG41 125 aa12.24□□□□□ -0.45
CDH3-204ENST00000565453 IL1F10Q8WWZ1 152 aa12.24□□□□□ -0.45
CDH3-204ENST00000565453 HDHD3Q9BSH5 251 aaPredicted RBP12.24□□□□□ -0.45
CDH3-204ENST00000565453 PARP12Q9H0J9 701 aaKnown RBP12.24□□□□□ -0.45
CDH3-204ENST00000565453 RIMS4Q9H426 269 aaPredicted RBP12.24□□□□□ -0.45
CDH3-204ENST00000565453 CHMP1AQ9HD42 196 aaPredicted RBP12.24□□□□□ -0.45
CDH3-204ENST00000565453 PLEKHJ1Q9NW61 149 aa12.24□□□□□ -0.45
CDH3-204ENST00000565453 AK3Q9UIJ7 227 aa12.24□□□□□ -0.45
CDH3-204ENST00000565453 HSF4Q9ULV5 492 aa12.24□□□□□ -0.45
CDH3-204ENST00000565453 IGHV7-81A0A0B4J1V7 117 aa12.23□□□□□ -0.45
CDH3-204ENST00000565453 ITGB1BP1O14713 200 aa12.23□□□□□ -0.45
CDH3-204ENST00000565453 NBR2O15453 112 aa12.23□□□□□ -0.45
CDH3-204ENST00000565453 OR5H8P0DN80 308 aa12.23□□□□□ -0.45
CDH3-204ENST00000565453 ARSBP15848 533 aa12.23□□□□□ -0.45
CDH3-204ENST00000565453 PSMA1P25786 263 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms