RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 IGLV1-47P01700 117 aa21.05■□□□□ 0.96
NME3-208ENST00000565379 IGHV3-43DP0DP04 118 aa21.05■□□□□ 0.96
NME3-208ENST00000565379 RCVRNP35243 200 aa21.05■□□□□ 0.96
NME3-208ENST00000565379 ARPC4P59998 168 aa21.05■□□□□ 0.96
NME3-208ENST00000565379 ACTBP60709 375 aa21.05■□□□□ 0.96
NME3-208ENST00000565379 PRB3Q04118 309 aaPredicted RBP21.05■□□□□ 0.96
NME3-208ENST00000565379 BRD3OSQ6XYD6 125 aa21.05■□□□□ 0.96
NME3-208ENST00000565379 GVQW1Q8N7I0 195 aa21.05■□□□□ 0.96
NME3-208ENST00000565379 OR52L2PQ8NGH6 319 aa21.05■□□□□ 0.96
NME3-208ENST00000565379 FAM216AQ8WUB2 273 aa21.05■□□□□ 0.96
NME3-208ENST00000565379 EDARADDQ8WWZ3 215 aa21.05■□□□□ 0.96
NME3-208ENST00000565379 MMP28Q9H239 520 aa21.05■□□□□ 0.96
NME3-208ENST00000565379 SLC23A1Q9UHI7 598 aa21.05■□□□□ 0.96
NME3-208ENST00000565379 TRBV6-7A0A0A0MS04 114 aa21.04■□□□□ 0.96
NME3-208ENST00000565379 TRIM77I1YAP6 450 aa21.04■□□□□ 0.96
NME3-208ENST00000565379 RBBP9O75884 186 aa21.04■□□□□ 0.96
NME3-208ENST00000565379 HTR1DP28221 377 aa21.04■□□□□ 0.96
NME3-208ENST00000565379 CEACAM3P40198 252 aa21.04■□□□□ 0.96
NME3-208ENST00000565379 COMPP49747 757 aaPredicted RBP21.04■□□□□ 0.96
NME3-208ENST00000565379 UBA52P62987 128 aaKnown RBP21.04■□□□□ 0.96
NME3-208ENST00000565379 HLA-DRB5Q30154 266 aa21.04■□□□□ 0.96
NME3-208ENST00000565379 RUSC1-AS1Q66K80 236 aa21.04■□□□□ 0.96
NME3-208ENST00000565379 PIP4P2Q8N4L2 257 aa21.04■□□□□ 0.96
NME3-208ENST00000565379 GCDHQ92947 438 aaPredicted RBP21.04■□□□□ 0.96
NME3-208ENST00000565379 GHITMQ9H3K2 345 aa21.04■□□□□ 0.96
NME3-208ENST00000565379 FAM96BQ9Y3D0 163 aa21.04■□□□□ 0.96
NME3-208ENST00000565379 IGKV1D-8A0A087WSZ0 117 aa21.03■□□□□ 0.96
NME3-208ENST00000565379 IGKV1-6A0A0C4DH72 117 aa21.03■□□□□ 0.96
NME3-208ENST00000565379 FAM172BPA6NC97 362 aa21.03■□□□□ 0.96
NME3-208ENST00000565379 SAA4P35542 130 aa21.03■□□□□ 0.96
NME3-208ENST00000565379 CEACAM6P40199 344 aa21.03■□□□□ 0.96
NME3-208ENST00000565379 TAS2R46P59540 309 aa21.03■□□□□ 0.96
NME3-208ENST00000565379 MADCAM1Q13477 382 aa21.03■□□□□ 0.96
NME3-208ENST00000565379 HERPUD1Q15011 391 aa21.03■□□□□ 0.96
NME3-208ENST00000565379 SLC25A48Q6ZT89 311 aaKnown RBP21.03■□□□□ 0.96
NME3-208ENST00000565379 OR5AP2Q8NGF4 316 aa21.03■□□□□ 0.96
NME3-208ENST00000565379 OR10V1Q8NGI7 309 aa21.03■□□□□ 0.96
NME3-208ENST00000565379 OR4P4Q8NGL7 312 aa21.03■□□□□ 0.96
NME3-208ENST00000565379 SMIM4Q8WVI0 70 aa21.03■□□□□ 0.96
NME3-208ENST00000565379 MALSU1Q96EH3 234 aa21.03■□□□□ 0.96
NME3-208ENST00000565379 GINS4Q9BRT9 223 aa21.03■□□□□ 0.96
NME3-208ENST00000565379 MTFP1Q9UDX5 166 aa21.03■□□□□ 0.96
NME3-208ENST00000565379 ZNF107Q9UII5 783 aaPredicted RBP21.03■□□□□ 0.96
NME3-208ENST00000565379 A0A1W2PRD5 423 aa21.02■□□□□ 0.96
NME3-208ENST00000565379 A0A1W2PRF3 423 aa21.02■□□□□ 0.96
NME3-208ENST00000565379 A0A1W2PRM7 423 aa21.02■□□□□ 0.96
NME3-208ENST00000565379 MEIS3P1A6NDR6 274 aa21.02■□□□□ 0.96
NME3-208ENST00000565379 LEUTXA8MZ59 168 aa21.02■□□□□ 0.96
NME3-208ENST00000565379 BET1O15155 118 aa21.02■□□□□ 0.96
NME3-208ENST00000565379 GSTZ1O43708 216 aaPredicted RBP21.02■□□□□ 0.96
NME3-208ENST00000565379 IL3RAP26951 378 aa21.02■□□□□ 0.96
NME3-208ENST00000565379 PPP1CCP36873 323 aaKnown RBP21.02■□□□□ 0.96
NME3-208ENST00000565379 GNG10P50151 68 aa21.02■□□□□ 0.96
NME3-208ENST00000565379 RAB7AP51149 207 aa21.02■□□□□ 0.96
NME3-208ENST00000565379 IGSF11Q5DX21 431 aa21.02■□□□□ 0.96
NME3-208ENST00000565379 C5orf24Q7Z6I8 188 aa21.02■□□□□ 0.96
NME3-208ENST00000565379 ZNF439Q8NDP4 499 aa21.02■□□□□ 0.96
NME3-208ENST00000565379 OR2AK2Q8NG84 335 aa21.02■□□□□ 0.96
NME3-208ENST00000565379 OR10X1Q8NGY0 326 aa21.02■□□□□ 0.96
NME3-208ENST00000565379 OR52I2Q8NH67 350 aa21.02■□□□□ 0.96
NME3-208ENST00000565379 LEAP2Q969E1 77 aa21.02■□□□□ 0.96
NME3-208ENST00000565379 JMJD8Q96S16 334 aa21.02■□□□□ 0.96
NME3-208ENST00000565379 NECAP2Q9NVZ3 263 aa21.02■□□□□ 0.96
NME3-208ENST00000565379 DPM3Q9P2X0 92 aa21.02■□□□□ 0.96
NME3-208ENST00000565379 V9GYH0 126 aa21.02■□□□□ 0.96
NME3-208ENST00000565379 MDFIC2A0A1B0GVS7 189 aa21.01■□□□□ 0.95
NME3-208ENST00000565379 TMEM89A2RUT3 159 aa21.01■□□□□ 0.95
NME3-208ENST00000565379 BUB1B-PAK6H3BSN5 160 aa21.01■□□□□ 0.95
NME3-208ENST00000565379 FBP1P09467 338 aa21.01■□□□□ 0.95
NME3-208ENST00000565379 GNMTQ14749 295 aa21.01■□□□□ 0.95
NME3-208ENST00000565379 TAF15Q92804 592 aaKnown RBP eCLIP21.01■□□□□ 0.95
NME3-208ENST00000565379 SNAPC3Q92966 411 aa21.01■□□□□ 0.95
NME3-208ENST00000565379 ABHD14AQ9BUJ0 271 aa21.01■□□□□ 0.95
NME3-208ENST00000565379 TAS2R8Q9NYW2 309 aa21.01■□□□□ 0.95
NME3-208ENST00000565379 DNAJC9-AS1A6NH13 148 aa21■□□□□ 0.95
NME3-208ENST00000565379 OOSP1A8MZH6 123 aa21■□□□□ 0.95
NME3-208ENST00000565379 ZNF45Q02386 682 aa21■□□□□ 0.95
NME3-208ENST00000565379 CDK10Q15131 360 aa21■□□□□ 0.95
NME3-208ENST00000565379 ACTBL2Q562R1 376 aa21■□□□□ 0.95
NME3-208ENST00000565379 CT45A1Q5HYN5 189 aa21■□□□□ 0.95
NME3-208ENST00000565379 C3orf56Q8N813 242 aa21■□□□□ 0.95
NME3-208ENST00000565379 CT45A3Q8NHU0 189 aa21■□□□□ 0.95
NME3-208ENST00000565379 PRDM13Q9H4Q3 707 aa21■□□□□ 0.95
NME3-208ENST00000565379 RDH8Q9NYR8 311 aa21■□□□□ 0.95
NME3-208ENST00000565379 OR1A1Q9P1Q5 309 aa21■□□□□ 0.95
NME3-208ENST00000565379 IGHV3-7P01780 117 aa20.99■□□□□ 0.95
NME3-208ENST00000565379 TBPP20226 339 aa20.99■□□□□ 0.95
NME3-208ENST00000565379 OR3A3P47888 321 aa20.99■□□□□ 0.95
NME3-208ENST00000565379 PYDC2Q56P42 97 aa20.99■□□□□ 0.95
NME3-208ENST00000565379 UTF1Q5T230 341 aa20.99■□□□□ 0.95
NME3-208ENST00000565379 A0A0U1RQK1 487 aa20.98■□□□□ 0.95
NME3-208ENST00000565379 ARHGDIBP52566 201 aa20.98■□□□□ 0.95
NME3-208ENST00000565379 DGCR2P98153 550 aa20.98■□□□□ 0.95
NME3-208ENST00000565379 RBMS3Q6XE24 437 aaKnown RBP20.98■□□□□ 0.95
NME3-208ENST00000565379 H1FOOQ8IZA3 346 aaPredicted RBP20.98■□□□□ 0.95
NME3-208ENST00000565379 OR5H2Q8NGV7 314 aa20.98■□□□□ 0.95
NME3-208ENST00000565379 MEGF9Q9H1U4 602 aa20.98■□□□□ 0.95
NME3-208ENST00000565379 KLK11Q9UBX7 282 aa20.98■□□□□ 0.95
NME3-208ENST00000565379 RBMX2Q9Y388 322 aaKnown RBP20.98■□□□□ 0.95
NME3-208ENST00000565379 CSF1P09603 554 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms