RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 AMY1AP04745 511 aa10.85□□□□□ -0.67
VPS9D1-204ENST00000565023 AMY2AP04746 511 aa10.85□□□□□ -0.67
VPS9D1-204ENST00000565023 IL3RAP26951 378 aa10.85□□□□□ -0.67
VPS9D1-204ENST00000565023 TGFBR1P36897 503 aa10.85□□□□□ -0.67
VPS9D1-204ENST00000565023 RAB7AP51149 207 aa10.85□□□□□ -0.67
VPS9D1-204ENST00000565023 SCAND1P57086 179 aa10.85□□□□□ -0.67
VPS9D1-204ENST00000565023 LOXL3P58215 753 aa10.85□□□□□ -0.67
VPS9D1-204ENST00000565023 LSM3P62310 102 aaKnown RBP10.85□□□□□ -0.67
VPS9D1-204ENST00000565023 PLAC9Q5JTB6 97 aa10.85□□□□□ -0.67
VPS9D1-204ENST00000565023 SLC16A12Q6ZSM3 486 aa10.85□□□□□ -0.67
VPS9D1-204ENST00000565023 ZNF554Q86TJ5 538 aa10.85□□□□□ -0.67
VPS9D1-204ENST00000565023 SETD6Q8TBK2 473 aa10.85□□□□□ -0.67
VPS9D1-204ENST00000565023 TAF9BQ9HBM6 251 aa10.85□□□□□ -0.67
VPS9D1-204ENST00000565023 IGHV1-3A0A0C4DH29 117 aa10.84□□□□□ -0.67
VPS9D1-204ENST00000565023 TCRBV4S1A1TA0A5B7 111 aa10.84□□□□□ -0.67
VPS9D1-204ENST00000565023 METTL21EPA6NDL7 271 aa10.84□□□□□ -0.67
VPS9D1-204ENST00000565023 FAM90A9PA6NNJ1 464 aa10.84□□□□□ -0.67
VPS9D1-204ENST00000565023 G3V4G9 280 aa10.84□□□□□ -0.67
VPS9D1-204ENST00000565023 SNRPBP14678 240 aaKnown RBP10.84□□□□□ -0.67
VPS9D1-204ENST00000565023 RPS19P39019 145 aaKnown RBP10.84□□□□□ -0.67
VPS9D1-204ENST00000565023 GNMTQ14749 295 aa10.84□□□□□ -0.67
VPS9D1-204ENST00000565023 MOGAT2Q3SYC2 334 aa10.84□□□□□ -0.67
VPS9D1-204ENST00000565023 PDLIM3Q53GG5 364 aaPredicted RBP10.84□□□□□ -0.67
VPS9D1-204ENST00000565023 TRAT1Q6PIZ9 186 aa10.84□□□□□ -0.67
VPS9D1-204ENST00000565023 NDUFA11Q86Y39 141 aa10.84□□□□□ -0.67
VPS9D1-204ENST00000565023 ANKRD13BQ86YJ7 626 aa10.84□□□□□ -0.67
VPS9D1-204ENST00000565023 OR8H3Q8N146 312 aa10.84□□□□□ -0.67
VPS9D1-204ENST00000565023 OR52L2PQ8NGH6 319 aa10.84□□□□□ -0.67
VPS9D1-204ENST00000565023 OR52M1Q8NGK5 317 aa10.84□□□□□ -0.67
VPS9D1-204ENST00000565023 ARHGAP5-AS1Q96IT6 56 aa10.84□□□□□ -0.67
VPS9D1-204ENST00000565023 PECRQ9BY49 303 aa10.84□□□□□ -0.67
VPS9D1-204ENST00000565023 RIMS4Q9H426 269 aaPredicted RBP10.84□□□□□ -0.67
VPS9D1-204ENST00000565023 CHMP1AQ9HD42 196 aaPredicted RBP10.84□□□□□ -0.67
VPS9D1-204ENST00000565023 KCNIP1Q9NZI2 227 aa10.84□□□□□ -0.67
VPS9D1-204ENST00000565023 AK3Q9UIJ7 227 aa10.84□□□□□ -0.67
VPS9D1-204ENST00000565023 LINC00527Q9UJ94 153 aa10.84□□□□□ -0.67
VPS9D1-204ENST00000565023 RYR3Q15413 4870 aa10.83□□□□□ -0.68
VPS9D1-204ENST00000565023 TRBV6-6A0A0A6YYG2 114 aa10.83□□□□□ -0.68
VPS9D1-204ENST00000565023 NCBP2LA6PVI3 153 aaKnown RBP10.83□□□□□ -0.68
VPS9D1-204ENST00000565023 GABARAPO95166 117 aa10.83□□□□□ -0.68
VPS9D1-204ENST00000565023 OPN1MWP04001 364 aa10.83□□□□□ -0.68
VPS9D1-204ENST00000565023 OPN1MW2P0DN77 364 aa10.83□□□□□ -0.68
VPS9D1-204ENST00000565023 OPN1MW3P0DN78 364 aa10.83□□□□□ -0.68
VPS9D1-204ENST00000565023 NCS1P62166 190 aa10.83□□□□□ -0.68
VPS9D1-204ENST00000565023 ZNF816Q0VGE8 651 aaPredicted RBP10.83□□□□□ -0.68
VPS9D1-204ENST00000565023 CTF1Q16619 201 aa10.83□□□□□ -0.68
VPS9D1-204ENST00000565023 TMEM30BQ3MIR4 351 aa10.83□□□□□ -0.68
VPS9D1-204ENST00000565023 IDNKQ5T6J7 187 aa10.83□□□□□ -0.68
VPS9D1-204ENST00000565023 ZNF880Q6PDB4 577 aa10.83□□□□□ -0.68
VPS9D1-204ENST00000565023 Q6ZPA2 131 aa10.83□□□□□ -0.68
VPS9D1-204ENST00000565023 THNSL2Q86YJ6 484 aa10.83□□□□□ -0.68
VPS9D1-204ENST00000565023 CROCCP3Q8IVE0 287 aa10.83□□□□□ -0.68
VPS9D1-204ENST00000565023 OR10R2Q8NGX6 335 aa10.83□□□□□ -0.68
VPS9D1-204ENST00000565023 LGALS14Q8TCE9 139 aa10.83□□□□□ -0.68
VPS9D1-204ENST00000565023 WIPF2Q8TF74 440 aaPredicted RBP10.83□□□□□ -0.68
VPS9D1-204ENST00000565023 RAB3CQ96E17 227 aa10.83□□□□□ -0.68
VPS9D1-204ENST00000565023 NAA50Q9GZZ1 169 aaKnown RBP10.83□□□□□ -0.68
VPS9D1-204ENST00000565023 RAB9BQ9NP90 201 aa10.83□□□□□ -0.68
VPS9D1-204ENST00000565023 OR2S2Q9NQN1 319 aa10.83□□□□□ -0.68
VPS9D1-204ENST00000565023 KCNK7Q9Y2U2 307 aa10.83□□□□□ -0.68
VPS9D1-204ENST00000565023 ETV7Q9Y603 341 aa10.83□□□□□ -0.68
VPS9D1-204ENST00000565023 ADARB2-AS1A8MUL3 147 aa10.82□□□□□ -0.68
VPS9D1-204ENST00000565023 ZNF736B4DX44 427 aaPredicted RBP10.82□□□□□ -0.68
VPS9D1-204ENST00000565023 M0QZK8 103 aa10.82□□□□□ -0.68
VPS9D1-204ENST00000565023 PF4V1P10720 104 aa10.82□□□□□ -0.68
VPS9D1-204ENST00000565023 PPP1CCP36873 323 aaKnown RBP10.82□□□□□ -0.68
VPS9D1-204ENST00000565023 ZNF134P52741 427 aa10.82□□□□□ -0.68
VPS9D1-204ENST00000565023 VBP1P61758 197 aa10.82□□□□□ -0.68
VPS9D1-204ENST00000565023 Q3ZCU0 254 aa10.82□□□□□ -0.68
VPS9D1-204ENST00000565023 CT45A1Q5HYN5 189 aa10.82□□□□□ -0.68
VPS9D1-204ENST00000565023 GPR141Q7Z602 305 aa10.82□□□□□ -0.68
VPS9D1-204ENST00000565023 TGIF2LXQ8IUE1 241 aa10.82□□□□□ -0.68
VPS9D1-204ENST00000565023 LINC00311Q8N616 119 aa10.82□□□□□ -0.68
VPS9D1-204ENST00000565023 C5orf56Q8N8D9 126 aa10.82□□□□□ -0.68
VPS9D1-204ENST00000565023 OR4F17Q8NGA8 305 aa10.82□□□□□ -0.68
VPS9D1-204ENST00000565023 OR4X2Q8NGF9 303 aa10.82□□□□□ -0.68
VPS9D1-204ENST00000565023 OR5H6Q8NGV6 325 aa10.82□□□□□ -0.68
VPS9D1-204ENST00000565023 CT45A3Q8NHU0 189 aa10.82□□□□□ -0.68
VPS9D1-204ENST00000565023 RTN4IP1Q8WWV3 396 aaPredicted RBP10.82□□□□□ -0.68
VPS9D1-204ENST00000565023 SLC25A46Q96AG3 418 aa10.82□□□□□ -0.68
VPS9D1-204ENST00000565023 EAF1Q96JC9 268 aaPredicted RBP10.82□□□□□ -0.68
VPS9D1-204ENST00000565023 NOL4LQ96MY1 436 aaPredicted RBP10.82□□□□□ -0.68
VPS9D1-204ENST00000565023 OR4F4Q96R69 305 aa10.82□□□□□ -0.68
VPS9D1-204ENST00000565023 ATG5Q9H1Y0 275 aa10.82□□□□□ -0.68
VPS9D1-204ENST00000565023 PSMB11A5LHX3 300 aa10.81□□□□□ -0.68
VPS9D1-204ENST00000565023 SERPINE3A8MV23 424 aa10.81□□□□□ -0.68
VPS9D1-204ENST00000565023 MFNGO00587 321 aa10.81□□□□□ -0.68
VPS9D1-204ENST00000565023 PRB2P02812 416 aaPredicted RBP10.81□□□□□ -0.68
VPS9D1-204ENST00000565023 HIST1H1DP16402 221 aaKnown RBP10.81□□□□□ -0.68
VPS9D1-204ENST00000565023 SERPINB10P48595 397 aa10.81□□□□□ -0.68
VPS9D1-204ENST00000565023 CD83Q01151 205 aa10.81□□□□□ -0.68
VPS9D1-204ENST00000565023 HMGN3Q15651 99 aa10.81□□□□□ -0.68
VPS9D1-204ENST00000565023 TCTEX1D4Q5JR98 221 aa10.81□□□□□ -0.68
VPS9D1-204ENST00000565023 GPR107Q5VW38 600 aa10.81□□□□□ -0.68
VPS9D1-204ENST00000565023 SLC25A48Q6ZT89 311 aaKnown RBP10.81□□□□□ -0.68
VPS9D1-204ENST00000565023 MOB1BQ7L9L4 216 aa10.81□□□□□ -0.68
VPS9D1-204ENST00000565023 ZNF329Q86UD4 541 aa10.81□□□□□ -0.68
VPS9D1-204ENST00000565023 C8orf31Q8N9H6 132 aa10.81□□□□□ -0.68
VPS9D1-204ENST00000565023 ZNF439Q8NDP4 499 aa10.81□□□□□ -0.68
VPS9D1-204ENST00000565023 IL1F10Q8WWZ1 152 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms