RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 IGKV1-39P01597 117 aa17.46■□□□□ 0.38
MAP1LC3B-206ENST00000564844 IGKV1D-39P04432 117 aa17.46■□□□□ 0.38
MAP1LC3B-206ENST00000564844 FGF5P12034 268 aa17.46■□□□□ 0.38
MAP1LC3B-206ENST00000564844 CEACAM1P13688 526 aa17.46■□□□□ 0.38
MAP1LC3B-206ENST00000564844 MEF2BQ02080 365 aaPredicted RBP17.46■□□□□ 0.38
MAP1LC3B-206ENST00000564844 FAM78BQ5VT40 261 aa17.46■□□□□ 0.38
MAP1LC3B-206ENST00000564844 GRIFINA4D1Z8 144 aa17.45■□□□□ 0.38
MAP1LC3B-206ENST00000564844 PRSS47A8MTI9 375 aa17.45■□□□□ 0.38
MAP1LC3B-206ENST00000564844 COX5BP10606 129 aa17.45■□□□□ 0.38
MAP1LC3B-206ENST00000564844 NXPH1P58417 271 aa17.45■□□□□ 0.38
MAP1LC3B-206ENST00000564844 TCF23Q7RTU1 214 aa17.45■□□□□ 0.38
MAP1LC3B-206ENST00000564844 MRGPRGQ86SM5 289 aa17.45■□□□□ 0.38
MAP1LC3B-206ENST00000564844 MED12LQ86YW9 2145 aa17.45■□□□□ 0.38
MAP1LC3B-206ENST00000564844 FADS6Q8N9I5 356 aa17.45■□□□□ 0.38
MAP1LC3B-206ENST00000564844 ADGRG7Q96K78 797 aa17.45■□□□□ 0.38
MAP1LC3B-206ENST00000564844 OR2H1Q9GZK4 316 aa17.45■□□□□ 0.38
MAP1LC3B-206ENST00000564844 OCIAD1Q9NX40 245 aa17.45■□□□□ 0.38
MAP1LC3B-206ENST00000564844 PAGE4O60829 102 aa17.45■□□□□ 0.38
MAP1LC3B-206ENST00000564844 PRDX4Q13162 271 aa17.45■□□□□ 0.38
MAP1LC3B-206ENST00000564844 TDRG1Q3Y452 100 aa17.45■□□□□ 0.38
MAP1LC3B-206ENST00000564844 OR10J5Q8NHC4 309 aa17.45■□□□□ 0.38
MAP1LC3B-206ENST00000564844 MSL2Q9HCI7 577 aa17.45■□□□□ 0.38
MAP1LC3B-206ENST00000564844 RARRES3Q9UL19 164 aa17.45■□□□□ 0.38
MAP1LC3B-206ENST00000564844 FOXG1P55316 489 aaPredicted RBP17.44■□□□□ 0.38
MAP1LC3B-206ENST00000564844 FOXO1Q12778 655 aa17.44■□□□□ 0.38
MAP1LC3B-206ENST00000564844 SDSLQ96GA7 329 aa17.44■□□□□ 0.38
MAP1LC3B-206ENST00000564844 A0A1B0GWJ7 208 aa17.44■□□□□ 0.38
MAP1LC3B-206ENST00000564844 C5orf49A4QMS7 147 aa17.44■□□□□ 0.38
MAP1LC3B-206ENST00000564844 NGFP01138 241 aa17.44■□□□□ 0.38
MAP1LC3B-206ENST00000564844 CARD18P57730 90 aa17.44■□□□□ 0.38
MAP1LC3B-206ENST00000564844 ACSM6Q6P461 480 aa17.44■□□□□ 0.38
MAP1LC3B-206ENST00000564844 ASCL4Q6XD76 172 aa17.44■□□□□ 0.38
MAP1LC3B-206ENST00000564844 OR51I2Q9H344 312 aa17.44■□□□□ 0.38
MAP1LC3B-206ENST00000564844 RAB24Q969Q5 203 aa17.44■□□□□ 0.38
MAP1LC3B-206ENST00000564844 PLSCR2Q9NRY7 297 aa17.44■□□□□ 0.38
MAP1LC3B-206ENST00000564844 ZNF320A2RRD8 509 aa17.43■□□□□ 0.38
MAP1LC3B-206ENST00000564844 LILRA1O75019 489 aa17.43■□□□□ 0.38
MAP1LC3B-206ENST00000564844 KRASP01116 189 aa17.43■□□□□ 0.38
MAP1LC3B-206ENST00000564844 HOXA4Q00056 320 aaPredicted RBP17.43■□□□□ 0.38
MAP1LC3B-206ENST00000564844 TMEM42Q69YG0 159 aa17.43■□□□□ 0.38
MAP1LC3B-206ENST00000564844 TCEAL6Q6IPX3 200 aa17.43■□□□□ 0.38
MAP1LC3B-206ENST00000564844 OR5D13Q8NGL4 314 aa17.43■□□□□ 0.38
MAP1LC3B-206ENST00000564844 OR5P3Q8WZ94 311 aa17.43■□□□□ 0.38
MAP1LC3B-206ENST00000564844 IGKV1-5P01602 117 aa17.43■□□□□ 0.38
MAP1LC3B-206ENST00000564844 PCSK4Q6UW60 755 aa17.43■□□□□ 0.38
MAP1LC3B-206ENST00000564844 SYT13Q7L8C5 426 aa17.43■□□□□ 0.38
MAP1LC3B-206ENST00000564844 ZNF552Q9H707 407 aaPredicted RBP17.43■□□□□ 0.38
MAP1LC3B-206ENST00000564844 TCFL5Q9UL49 500 aa17.43■□□□□ 0.38
MAP1LC3B-206ENST00000564844 IGLV3-32A0A0A0MS00 114 aa17.42■□□□□ 0.38
MAP1LC3B-206ENST00000564844 C10orf142B7Z368 130 aa17.42■□□□□ 0.38
MAP1LC3B-206ENST00000564844 TRAPPC2LH3BP13 241 aa17.42■□□□□ 0.38
MAP1LC3B-206ENST00000564844 RBMXL2O75526 392 aaKnown RBP17.42■□□□□ 0.38
MAP1LC3B-206ENST00000564844 RFPL3SP0C7P2 107 aa17.42■□□□□ 0.38
MAP1LC3B-206ENST00000564844 CCL7P80098 99 aa17.42■□□□□ 0.38
MAP1LC3B-206ENST00000564844 SLC38A11Q08AI6 406 aa17.42■□□□□ 0.38
MAP1LC3B-206ENST00000564844 OR2T10Q8NGZ9 312 aa17.42■□□□□ 0.38
MAP1LC3B-206ENST00000564844 PSMF1Q92530 271 aa17.42■□□□□ 0.38
MAP1LC3B-206ENST00000564844 CLDN23Q96B33 292 aa17.42■□□□□ 0.38
MAP1LC3B-206ENST00000564844 TMEM18Q96B42 140 aa17.42■□□□□ 0.38
MAP1LC3B-206ENST00000564844 NOL4LQ96MY1 436 aaPredicted RBP17.42■□□□□ 0.38
MAP1LC3B-206ENST00000564844 DERL1Q9BUN8 251 aa17.42■□□□□ 0.38
MAP1LC3B-206ENST00000564844 ACTR3CQ9C0K3 210 aaPredicted RBP17.42■□□□□ 0.38
MAP1LC3B-206ENST00000564844 TMEM242Q9NWH2 141 aa17.42■□□□□ 0.38
MAP1LC3B-206ENST00000564844 PTRH2Q9Y3E5 179 aaKnown RBP17.42■□□□□ 0.38
MAP1LC3B-206ENST00000564844 CLEC18AA5D8T8 446 aa17.42■□□□□ 0.38
MAP1LC3B-206ENST00000564844 H0Y980 276 aa17.42■□□□□ 0.38
MAP1LC3B-206ENST00000564844 GYPAP02724 150 aa17.42■□□□□ 0.38
MAP1LC3B-206ENST00000564844 LIFP15018 202 aa17.42■□□□□ 0.38
MAP1LC3B-206ENST00000564844 WIPI1Q5MNZ9 446 aaPredicted RBP17.42■□□□□ 0.38
MAP1LC3B-206ENST00000564844 CLEC18CQ8NCF0 446 aa17.42■□□□□ 0.38
MAP1LC3B-206ENST00000564844 SMRP1Q8NCR6 262 aa17.42■□□□□ 0.38
MAP1LC3B-206ENST00000564844 CLN8Q9UBY8 286 aa17.42■□□□□ 0.38
MAP1LC3B-206ENST00000564844 COL5A1P20908 1838 aaPredicted RBP17.42■□□□□ 0.38
MAP1LC3B-206ENST00000564844 LOC102725191A0A1B0GVB3 256 aa17.41■□□□□ 0.38
MAP1LC3B-206ENST00000564844 IGLV3-19P01714 112 aa17.41■□□□□ 0.38
MAP1LC3B-206ENST00000564844 LINC00205P59089 165 aa17.41■□□□□ 0.38
MAP1LC3B-206ENST00000564844 PROK2Q9HC23 129 aa17.41■□□□□ 0.38
MAP1LC3B-206ENST00000564844 FKBP11Q9NYL4 201 aa17.41■□□□□ 0.38
MAP1LC3B-206ENST00000564844 TRAV1-1A0A0B4J248 108 aa17.41■□□□□ 0.38
MAP1LC3B-206ENST00000564844 OR6C6A6NF89 314 aa17.41■□□□□ 0.38
MAP1LC3B-206ENST00000564844 VAMP5O95183 116 aa17.41■□□□□ 0.38
MAP1LC3B-206ENST00000564844 NAPSAO96009 420 aa17.41■□□□□ 0.38
MAP1LC3B-206ENST00000564844 IFNA1P01562 189 aa17.41■□□□□ 0.38
MAP1LC3B-206ENST00000564844 PSMB3P49720 205 aa17.41■□□□□ 0.38
MAP1LC3B-206ENST00000564844 TMEM41BQ5BJD5 291 aa17.41■□□□□ 0.38
MAP1LC3B-206ENST00000564844 SPATA46Q5T0L3 261 aa17.41■□□□□ 0.38
MAP1LC3B-206ENST00000564844 TAF15Q92804 592 aaKnown RBP eCLIP17.41■□□□□ 0.38
MAP1LC3B-206ENST00000564844 RAB40CQ96S21 281 aa17.41■□□□□ 0.38
MAP1LC3B-206ENST00000564844 WDR61Q9GZS3 305 aaKnown RBP17.41■□□□□ 0.38
MAP1LC3B-206ENST00000564844 OR8B8Q15620 311 aa17.41■□□□□ 0.38
MAP1LC3B-206ENST00000564844 GCSAMLQ5JQS6 135 aa17.41■□□□□ 0.38
MAP1LC3B-206ENST00000564844 RABEPKQ7Z6M1 372 aa17.41■□□□□ 0.38
MAP1LC3B-206ENST00000564844 RNF138Q8WVD3 245 aa17.41■□□□□ 0.38
MAP1LC3B-206ENST00000564844 MBD3L1Q8WWY6 194 aa17.41■□□□□ 0.38
MAP1LC3B-206ENST00000564844 OR2W1Q9Y3N9 320 aa17.41■□□□□ 0.38
MAP1LC3B-206ENST00000564844 ATP23Q9Y6H3 246 aa17.41■□□□□ 0.38
MAP1LC3B-206ENST00000564844 IGLV3-12A0A075B6K2 115 aa17.4■□□□□ 0.38
MAP1LC3B-206ENST00000564844 A0A1W2PQM1 296 aa17.4■□□□□ 0.38
MAP1LC3B-206ENST00000564844 KBTBD11O94819 623 aa17.4■□□□□ 0.38
MAP1LC3B-206ENST00000564844 ZNF816Q0VGE8 651 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms