RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 OR2T10Q8NGZ9 312 aa14.58□□□□□ -0.08
CLN6-204ENST00000564752 CT45A3Q8NHU0 189 aa14.58□□□□□ -0.08
CLN6-204ENST00000564752 EAF1Q96JC9 268 aaPredicted RBP14.58□□□□□ -0.08
CLN6-204ENST00000564752 GPR61Q9BZJ8 451 aa14.58□□□□□ -0.08
CLN6-204ENST00000564752 CHMP1AQ9HD42 196 aaPredicted RBP14.58□□□□□ -0.08
CLN6-204ENST00000564752 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.58□□□□□ -0.08
CLN6-204ENST00000564752 PLEKHJ1Q9NW61 149 aa14.58□□□□□ -0.08
CLN6-204ENST00000564752 ABRACLQ9P1F3 81 aa14.58□□□□□ -0.08
CLN6-204ENST00000564752 LINC00527Q9UJ94 153 aa14.58□□□□□ -0.08
CLN6-204ENST00000564752 SLC6A1P30531 599 aa14.57□□□□□ -0.08
CLN6-204ENST00000564752 ZNF134P52741 427 aa14.57□□□□□ -0.08
CLN6-204ENST00000564752 HTD2P86397 168 aa14.57□□□□□ -0.08
CLN6-204ENST00000564752 HMGN3Q15651 99 aa14.57□□□□□ -0.08
CLN6-204ENST00000564752 SSX1Q16384 188 aa14.57□□□□□ -0.08
CLN6-204ENST00000564752 MORN2Q502X0 79 aa14.57□□□□□ -0.08
CLN6-204ENST00000564752 STEAP3Q658P3 488 aa14.57□□□□□ -0.08
CLN6-204ENST00000564752 C18orf65Q6ZTR6 163 aa14.57□□□□□ -0.08
CLN6-204ENST00000564752 SLC35E3Q7Z769 313 aa14.57□□□□□ -0.08
CLN6-204ENST00000564752 SVOPQ8N4V2 548 aa14.57□□□□□ -0.08
CLN6-204ENST00000564752 COMMD1Q8N668 190 aa14.57□□□□□ -0.08
CLN6-204ENST00000564752 OR52L2PQ8NGH6 319 aa14.57□□□□□ -0.08
CLN6-204ENST00000564752 GALMQ96C23 342 aa14.57□□□□□ -0.08
CLN6-204ENST00000564752 ABHD14AQ9BUJ0 271 aa14.57□□□□□ -0.08
CLN6-204ENST00000564752 LPAR5Q9H1C0 372 aa14.57□□□□□ -0.08
CLN6-204ENST00000564752 Q9H521 79 aa14.57□□□□□ -0.08
CLN6-204ENST00000564752 A0A0A6YYD4 124 aa14.56□□□□□ -0.08
CLN6-204ENST00000564752 LINC01548A6NM66 108 aa14.56□□□□□ -0.08
CLN6-204ENST00000564752 NCBP2LA6PVI3 153 aaKnown RBP14.56□□□□□ -0.08
CLN6-204ENST00000564752 RGS11O94810 467 aa14.56□□□□□ -0.08
CLN6-204ENST00000564752 CD1BP29016 333 aa14.56□□□□□ -0.08
CLN6-204ENST00000564752 PPP1CCP36873 323 aaKnown RBP14.56□□□□□ -0.08
CLN6-204ENST00000564752 MYCNOSP40205 109 aa14.56□□□□□ -0.08
CLN6-204ENST00000564752 RANBP1P43487 201 aa14.56□□□□□ -0.08
CLN6-204ENST00000564752 CLDN12P56749 244 aa14.56□□□□□ -0.08
CLN6-204ENST00000564752 SLC35B1P78383 322 aa14.56□□□□□ -0.08
CLN6-204ENST00000564752 C8orf86Q6ZUL3 223 aa14.56□□□□□ -0.08
CLN6-204ENST00000564752 MOB1BQ7L9L4 216 aa14.56□□□□□ -0.08
CLN6-204ENST00000564752 STPG2Q8N412 459 aa14.56□□□□□ -0.08
CLN6-204ENST00000564752 Q8N6K4 173 aa14.56□□□□□ -0.08
CLN6-204ENST00000564752 SETD6Q8TBK2 473 aa14.56□□□□□ -0.08
CLN6-204ENST00000564752 NDUFB11Q9NX14 153 aa14.56□□□□□ -0.08
CLN6-204ENST00000564752 LRRC42Q9Y546 428 aa14.56□□□□□ -0.08
CLN6-204ENST00000564752 V9GY05 133 aa14.56□□□□□ -0.08
CLN6-204ENST00000564752 SOCS1O15524 211 aa14.55□□□□□ -0.08
CLN6-204ENST00000564752 YPEL1O60688 119 aa14.55□□□□□ -0.08
CLN6-204ENST00000564752 NAPSAO96009 420 aa14.55□□□□□ -0.08
CLN6-204ENST00000564752 MOSP00540 346 aa14.55□□□□□ -0.08
CLN6-204ENST00000564752 PSMD7P51665 324 aa14.55□□□□□ -0.08
CLN6-204ENST00000564752 C5orf24Q7Z6I8 188 aa14.55□□□□□ -0.08
CLN6-204ENST00000564752 FOXRED2Q8IWF2 684 aa14.55□□□□□ -0.08
CLN6-204ENST00000564752 IL1F10Q8WWZ1 152 aa14.55□□□□□ -0.08
CLN6-204ENST00000564752 DPF1Q92782 380 aa14.55□□□□□ -0.08
CLN6-204ENST00000564752 YPEL2Q96QA6 119 aa14.55□□□□□ -0.08
CLN6-204ENST00000564752 P2RX4Q99571 388 aa14.55□□□□□ -0.08
CLN6-204ENST00000564752 MCRIP2Q9BUT9 160 aaKnown RBP14.55□□□□□ -0.08
CLN6-204ENST00000564752 NUDT19A8MXV4 375 aa14.54□□□□□ -0.08
CLN6-204ENST00000564752 ZNF736B4DX44 427 aaPredicted RBP14.54□□□□□ -0.08
CLN6-204ENST00000564752 PDCD5O14737 125 aa14.54□□□□□ -0.08
CLN6-204ENST00000564752 LANCL1O43813 399 aa14.54□□□□□ -0.08
CLN6-204ENST00000564752 MRPS14O60783 128 aaKnown RBP14.54□□□□□ -0.08
CLN6-204ENST00000564752 MYL9P24844 172 aa14.54□□□□□ -0.08
CLN6-204ENST00000564752 HES5Q5TA89 166 aa14.54□□□□□ -0.08
CLN6-204ENST00000564752 FAM89BQ8N5H3 189 aa14.54□□□□□ -0.08
CLN6-204ENST00000564752 OR2AK2Q8NG84 335 aa14.54□□□□□ -0.08
CLN6-204ENST00000564752 FAM3DQ96BQ1 224 aa14.54□□□□□ -0.08
CLN6-204ENST00000564752 ABCG5Q9H222 651 aa14.54□□□□□ -0.08
CLN6-204ENST00000564752 RIMS4Q9H426 269 aaPredicted RBP14.54□□□□□ -0.08
CLN6-204ENST00000564752 LIN7CQ9NUP9 197 aaKnown RBP14.54□□□□□ -0.08
CLN6-204ENST00000564752 STEAP1Q9UHE8 339 aa14.54□□□□□ -0.08
CLN6-204ENST00000564752 AK3Q9UIJ7 227 aa14.54□□□□□ -0.08
CLN6-204ENST00000564752 GPR12P47775 334 aa14.53□□□□□ -0.08
CLN6-204ENST00000564752 VEGFCP49767 419 aa14.53□□□□□ -0.08
CLN6-204ENST00000564752 LSAMPQ13449 338 aa14.53□□□□□ -0.08
CLN6-204ENST00000564752 C11orf87Q6NUJ2 197 aa14.53□□□□□ -0.08
CLN6-204ENST00000564752 ZNF880Q6PDB4 577 aa14.53□□□□□ -0.08
CLN6-204ENST00000564752 TEX38Q6PEX7 206 aa14.53□□□□□ -0.08
CLN6-204ENST00000564752 ZNF695Q8IW36 515 aa14.53□□□□□ -0.08
CLN6-204ENST00000564752 Q8N9W7 124 aa14.53□□□□□ -0.08
CLN6-204ENST00000564752 KLHL30-AS1Q8NEE0 82 aa14.53□□□□□ -0.08
CLN6-204ENST00000564752 OR8H1Q8NGG4 311 aa14.53□□□□□ -0.08
CLN6-204ENST00000564752 C12orf4Q9NQ89 552 aa14.53□□□□□ -0.08
CLN6-204ENST00000564752 PLSCR3Q9NRY6 295 aa14.53□□□□□ -0.08
CLN6-204ENST00000564752 HSF4Q9ULV5 492 aa14.53□□□□□ -0.08
CLN6-204ENST00000564752 TRAV1-2A0A0B4J238 106 aa14.52□□□□□ -0.09
CLN6-204ENST00000564752 FOXI3A8MTJ6 420 aaPredicted RBP14.52□□□□□ -0.09
CLN6-204ENST00000564752 AP4M1O00189 453 aa14.52□□□□□ -0.09
CLN6-204ENST00000564752 PNLIPRP3Q17RR3 467 aa14.52□□□□□ -0.09
CLN6-204ENST00000564752 C2orf76Q3KRA6 126 aa14.52□□□□□ -0.09
CLN6-204ENST00000564752 LY6G6FQ5SQ64 297 aa14.52□□□□□ -0.09
CLN6-204ENST00000564752 CD200R1LQ6Q8B3 271 aa14.52□□□□□ -0.09
CLN6-204ENST00000564752 OR56B1Q8NGI3 324 aa14.52□□□□□ -0.09
CLN6-204ENST00000564752 ARHGAP5-AS1Q96IT6 56 aa14.52□□□□□ -0.09
CLN6-204ENST00000564752 RASL11BQ9BPW5 248 aa14.52□□□□□ -0.09
CLN6-204ENST00000564752 HDHD3Q9BSH5 251 aaPredicted RBP14.52□□□□□ -0.09
CLN6-204ENST00000564752 TENM3Q9P273 2699 aa14.51□□□□□ -0.09
CLN6-204ENST00000564752 TRBV6-6A0A0A6YYG2 114 aa14.51□□□□□ -0.09
CLN6-204ENST00000564752 TRDV1A0A1B0GX56 115 aa14.51□□□□□ -0.09
CLN6-204ENST00000564752 DENRO43583 198 aaKnown RBP14.51□□□□□ -0.09
CLN6-204ENST00000564752 PSMB9P28065 219 aa14.51□□□□□ -0.09
CLN6-204ENST00000564752 OR10A3P58181 314 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms