RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 C17orf50Q8WW18 174 aa13.47□□□□□ -0.25
RNF40-206ENST00000564260 ST6GALNAC6Q969X2 333 aa13.47□□□□□ -0.25
RNF40-206ENST00000564260 SCPEP1Q9HB40 452 aa13.47□□□□□ -0.25
RNF40-206ENST00000564260 A3GALT2U3KPV4 340 aa13.47□□□□□ -0.25
RNF40-206ENST00000564260 TRBV6-7A0A0A0MS04 114 aa13.46□□□□□ -0.25
RNF40-206ENST00000564260 A0A1B0GUS0 222 aa13.46□□□□□ -0.25
RNF40-206ENST00000564260 SULT1C2O00338 296 aa13.46□□□□□ -0.25
RNF40-206ENST00000564260 LANCL1O43813 399 aa13.46□□□□□ -0.25
RNF40-206ENST00000564260 CRYBA1P05813 215 aa13.46□□□□□ -0.25
RNF40-206ENST00000564260 KRTAP24-1Q3LI83 254 aa13.46□□□□□ -0.25
RNF40-206ENST00000564260 CT45A1Q5HYN5 189 aa13.46□□□□□ -0.25
RNF40-206ENST00000564260 CNIH2Q6PI25 160 aa13.46□□□□□ -0.25
RNF40-206ENST00000564260 OR10J5Q8NHC4 309 aa13.46□□□□□ -0.25
RNF40-206ENST00000564260 CT45A3Q8NHU0 189 aa13.46□□□□□ -0.25
RNF40-206ENST00000564260 AKR1E2Q96JD6 320 aa13.46□□□□□ -0.25
RNF40-206ENST00000564260 CHIAQ9BZP6 476 aa13.46□□□□□ -0.25
RNF40-206ENST00000564260 SLC23A1Q9UHI7 598 aa13.46□□□□□ -0.25
RNF40-206ENST00000564260 TCF19Q9Y242 345 aa13.46□□□□□ -0.25
RNF40-206ENST00000564260 HILPDAQ9Y5L2 63 aa13.46□□□□□ -0.25
RNF40-206ENST00000564260 IGHV3-43A0A0B4J1X8 118 aa13.45□□□□□ -0.26
RNF40-206ENST00000564260 RNF212BA8MTL3 300 aa13.45□□□□□ -0.26
RNF40-206ENST00000564260 HSD17B6O14756 317 aa13.45□□□□□ -0.26
RNF40-206ENST00000564260 RAB29O14966 203 aa13.45□□□□□ -0.26
RNF40-206ENST00000564260 NDUFA7O95182 113 aa13.45□□□□□ -0.26
RNF40-206ENST00000564260 SCTP09683 121 aa13.45□□□□□ -0.26
RNF40-206ENST00000564260 FAM106CPP0CH98 169 aa13.45□□□□□ -0.26
RNF40-206ENST00000564260 IGHV3-43DP0DP04 118 aa13.45□□□□□ -0.26
RNF40-206ENST00000564260 HKR1P10072 659 aa13.45□□□□□ -0.26
RNF40-206ENST00000564260 PPP1CCP36873 323 aaKnown RBP13.45□□□□□ -0.26
RNF40-206ENST00000564260 COMPP49747 757 aaPredicted RBP13.45□□□□□ -0.26
RNF40-206ENST00000564260 TAS2R20P59543 309 aa13.45□□□□□ -0.26
RNF40-206ENST00000564260 HOGA1Q86XE5 327 aa13.45□□□□□ -0.26
RNF40-206ENST00000564260 DYNAPQ8N1N2 210 aa13.45□□□□□ -0.26
RNF40-206ENST00000564260 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.45□□□□□ -0.26
RNF40-206ENST00000564260 OR52L2PQ8NGH6 319 aa13.45□□□□□ -0.26
RNF40-206ENST00000564260 OR10V1Q8NGI7 309 aa13.45□□□□□ -0.26
RNF40-206ENST00000564260 UBALD1Q8TB05 177 aa13.45□□□□□ -0.26
RNF40-206ENST00000564260 PIFOQ8TCI5 191 aa13.45□□□□□ -0.26
RNF40-206ENST00000564260 NUDCD2Q8WVJ2 157 aa13.45□□□□□ -0.26
RNF40-206ENST00000564260 LEAP2Q969E1 77 aa13.45□□□□□ -0.26
RNF40-206ENST00000564260 RANBP3Q9H6Z4 567 aaPredicted RBP13.45□□□□□ -0.26
RNF40-206ENST00000564260 ANXA10Q9UJ72 324 aa13.45□□□□□ -0.26
RNF40-206ENST00000564260 GAB2Q9UQC2 676 aa13.45□□□□□ -0.26
RNF40-206ENST00000564260 FBN1P35555 2871 aaKnown RBP13.45□□□□□ -0.26
RNF40-206ENST00000564260 A0A1W2PPI3 338 aa13.44□□□□□ -0.26
RNF40-206ENST00000564260 TMEM89A2RUT3 159 aa13.44□□□□□ -0.26
RNF40-206ENST00000564260 CCDC160A6NGH7 325 aa13.44□□□□□ -0.26
RNF40-206ENST00000564260 FAM90A9PA6NNJ1 464 aa13.44□□□□□ -0.26
RNF40-206ENST00000564260 GPR137BO60478 399 aa13.44□□□□□ -0.26
RNF40-206ENST00000564260 EIF4EP06730 217 aaKnown RBP13.44□□□□□ -0.26
RNF40-206ENST00000564260 ELK1P19419 428 aa13.44□□□□□ -0.26
RNF40-206ENST00000564260 PRSS3P35030 304 aa13.44□□□□□ -0.26
RNF40-206ENST00000564260 CEACAM6P40199 344 aa13.44□□□□□ -0.26
RNF40-206ENST00000564260 ZNF134P52741 427 aa13.44□□□□□ -0.26
RNF40-206ENST00000564260 FOXL1Q12952 345 aa13.44□□□□□ -0.26
RNF40-206ENST00000564260 HERPUD1Q15011 391 aa13.44□□□□□ -0.26
RNF40-206ENST00000564260 TGIF2LXQ8IUE1 241 aa13.44□□□□□ -0.26
RNF40-206ENST00000564260 RTN4IP1Q8WWV3 396 aaPredicted RBP13.44□□□□□ -0.26
RNF40-206ENST00000564260 CYYR1Q96J86 154 aa13.44□□□□□ -0.26
RNF40-206ENST00000564260 S1PR3Q99500 378 aa13.44□□□□□ -0.26
RNF40-206ENST00000564260 AGMATQ9BSE5 352 aa13.44□□□□□ -0.26
RNF40-206ENST00000564260 C19orf24Q9BVV8 132 aa13.44□□□□□ -0.26
RNF40-206ENST00000564260 SLIRPQ9GZT3 109 aaKnown RBP13.44□□□□□ -0.26
RNF40-206ENST00000564260 NXF2Q9GZY0 626 aaKnown RBP13.44□□□□□ -0.26
RNF40-206ENST00000564260 ANAPC10Q9UM13 185 aa13.44□□□□□ -0.26
RNF40-206ENST00000564260 IGKV1-6A0A0C4DH72 117 aa13.43□□□□□ -0.26
RNF40-206ENST00000564260 A6NDX4 124 aa13.43□□□□□ -0.26
RNF40-206ENST00000564260 FAM181BA6NEQ2 426 aa13.43□□□□□ -0.26
RNF40-206ENST00000564260 M0QZK8 103 aa13.43□□□□□ -0.26
RNF40-206ENST00000564260 SSX5O60225 188 aa13.43□□□□□ -0.26
RNF40-206ENST00000564260 HPGDSO60760 199 aa13.43□□□□□ -0.26
RNF40-206ENST00000564260 SLC22A5O76082 557 aa13.43□□□□□ -0.26
RNF40-206ENST00000564260 GSTT2P0CG29 244 aa13.43□□□□□ -0.26
RNF40-206ENST00000564260 GSTT2BP0CG30 244 aa13.43□□□□□ -0.26
RNF40-206ENST00000564260 CD1BP29016 333 aa13.43□□□□□ -0.26
RNF40-206ENST00000564260 ACTG1P63261 375 aa13.43□□□□□ -0.26
RNF40-206ENST00000564260 MRPS10P82664 201 aaKnown RBP13.43□□□□□ -0.26
RNF40-206ENST00000564260 GNMTQ14749 295 aa13.43□□□□□ -0.26
RNF40-206ENST00000564260 UTF1Q5T230 341 aa13.43□□□□□ -0.26
RNF40-206ENST00000564260 DHRS7BQ6IAN0 325 aaPredicted RBP13.43□□□□□ -0.26
RNF40-206ENST00000564260 ZNF833PQ6ZTB9 187 aa13.43□□□□□ -0.26
RNF40-206ENST00000564260 IZUMO1Q8IYV9 350 aa13.43□□□□□ -0.26
RNF40-206ENST00000564260 LYG1Q8N1E2 194 aa13.43□□□□□ -0.26
RNF40-206ENST00000564260 DGCR14Q96DF8 476 aaKnown RBP13.43□□□□□ -0.26
RNF40-206ENST00000564260 GINS4Q9BRT9 223 aa13.43□□□□□ -0.26
RNF40-206ENST00000564260 ST6GALNAC5Q9BVH7 336 aa13.43□□□□□ -0.26
RNF40-206ENST00000564260 IFI27L2Q9H2X8 130 aa13.43□□□□□ -0.26
RNF40-206ENST00000564260 RDH8Q9NYR8 311 aa13.43□□□□□ -0.26
RNF40-206ENST00000564260 ZNF230Q9UIE0 474 aaPredicted RBP13.43□□□□□ -0.26
RNF40-206ENST00000564260 MMP24Q9Y5R2 645 aa13.43□□□□□ -0.26
RNF40-206ENST00000564260 IGHV1-3A0A0C4DH29 117 aa13.42□□□□□ -0.26
RNF40-206ENST00000564260 FAM25AB3EWG3 89 aa13.42□□□□□ -0.26
RNF40-206ENST00000564260 FAM25CB3EWG5 89 aa13.42□□□□□ -0.26
RNF40-206ENST00000564260 FAM25GB3EWG6 89 aa13.42□□□□□ -0.26
RNF40-206ENST00000564260 RGS5O15539 181 aa13.42□□□□□ -0.26
RNF40-206ENST00000564260 IGHV3-7P01780 117 aa13.42□□□□□ -0.26
RNF40-206ENST00000564260 HLA-DQB1P01920 261 aa13.42□□□□□ -0.26
RNF40-206ENST00000564260 NAT1P18440 290 aa13.42□□□□□ -0.26
RNF40-206ENST00000564260 EBI3Q14213 229 aa13.42□□□□□ -0.26
RNF40-206ENST00000564260 PLA1AQ53H76 456 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms