RNA–Protein interactions for RNA: ENST00000564079.5

TUBGCP4-208, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TUBGCP4, Length 6,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-208ENST00000564079 CD33P20138 364 aa10.4□□□□□ -0.74
TUBGCP4-208ENST00000564079 TNFSF10P50591 281 aa10.4□□□□□ -0.74
TUBGCP4-208ENST00000564079 SCGB1D4Q6XE38 83 aa10.4□□□□□ -0.74
TUBGCP4-208ENST00000564079 LINC00596Q86U02 117 aa10.4□□□□□ -0.74
TUBGCP4-208ENST00000564079 OR4D11Q8NGI4 311 aa10.4□□□□□ -0.74
TUBGCP4-208ENST00000564079 C10orf35Q96D05 121 aa10.4□□□□□ -0.74
TUBGCP4-208ENST00000564079 SCARF2Q96GP6 870 aaPredicted RBP10.4□□□□□ -0.74
TUBGCP4-208ENST00000564079 RSG1Q9BU20 258 aa10.4□□□□□ -0.74
TUBGCP4-208ENST00000564079 MFNGO00587 321 aa10.4□□□□□ -0.74
TUBGCP4-208ENST00000564079 GPX1P07203 203 aa10.4□□□□□ -0.74
TUBGCP4-208ENST00000564079 FAM157CP0CG43 387 aa10.4□□□□□ -0.74
TUBGCP4-208ENST00000564079 BTG1P62324 171 aa10.4□□□□□ -0.74
TUBGCP4-208ENST00000564079 SLC16A13Q7RTY0 426 aa10.4□□□□□ -0.74
TUBGCP4-208ENST00000564079 SLC35E3Q7Z769 313 aa10.4□□□□□ -0.74
TUBGCP4-208ENST00000564079 OIT3Q8WWZ8 545 aa10.4□□□□□ -0.74
TUBGCP4-208ENST00000564079 SLC17A5Q9NRA2 495 aa10.4□□□□□ -0.74
TUBGCP4-208ENST00000564079 ZNF324O75467 553 aaPredicted RBP10.4□□□□□ -0.74
TUBGCP4-208ENST00000564079 SUCLG1P53597 346 aaKnown RBP10.4□□□□□ -0.74
TUBGCP4-208ENST00000564079 MIDNQ504T8 468 aa10.4□□□□□ -0.74
TUBGCP4-208ENST00000564079 C2CD4CQ8TF44 421 aa10.4□□□□□ -0.74
TUBGCP4-208ENST00000564079 ADAT3Q96EY9 351 aaPredicted RBP10.4□□□□□ -0.74
TUBGCP4-208ENST00000564079 NPFFR1Q9GZQ6 430 aa10.4□□□□□ -0.74
TUBGCP4-208ENST00000564079 A0A0G2JMM0 328 aa10.4□□□□□ -0.75
TUBGCP4-208ENST00000564079 A0A1W2PPB8 328 aa10.4□□□□□ -0.75
TUBGCP4-208ENST00000564079 A0A1W2PRS3 328 aa10.4□□□□□ -0.75
TUBGCP4-208ENST00000564079 KIR3DP1A8MWS1 328 aa10.4□□□□□ -0.75
TUBGCP4-208ENST00000564079 IGKV1D-33P01593 117 aa10.4□□□□□ -0.75
TUBGCP4-208ENST00000564079 IGKV1-33P01594 117 aa10.4□□□□□ -0.75
TUBGCP4-208ENST00000564079 SSBP1Q04837 148 aaKnown RBP10.4□□□□□ -0.75
TUBGCP4-208ENST00000564079 TIMM23BQ5SRD1 257 aa10.4□□□□□ -0.75
TUBGCP4-208ENST00000564079 TEX50A0A1B0GTY4 177 aa10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 TCTAP57738 103 aa10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 PEAR1Q5VY43 1037 aaPredicted RBP10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 OR2C3Q8N628 320 aa10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 SPSB2Q99619 263 aa10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 IGKV1-8A0A0C4DH67 115 aa10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 IGSF23A1L1A6 192 aa10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 C9orf170A2RU37 121 aa10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 FUCA1P04066 466 aa10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 KHDC3LQ587J8 217 aa10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 ZNF429Q86V71 674 aa10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 BAP18Q8IXM2 172 aa10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 LSMEM1Q8N8F7 131 aa10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 GPA33Q99795 319 aa10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 HIST1H1AQ02539 215 aaPredicted RBP10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 SNAI3Q3KNW1 292 aa10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 ZNF561Q8N587 486 aa10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 SLC26A10Q8NG04 563 aa10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 U3KQ87 197 aa10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 RD3LP0DJH9 198 aa10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 DLX1P56177 255 aa10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 RBM11P57052 281 aaKnown RBP10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 Q6ZT83 130 aa10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 OR1L6Q8NGR2 347 aa10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 LHFPL5Q8TAF8 219 aa10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 CHST5Q9GZS9 411 aa10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 EXOGQ9Y2C4 368 aaKnown RBP10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 SIAH2O43255 324 aa10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 PLPP2O43688 288 aa10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 CD59P13987 128 aa10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 NPPCP23582 126 aa10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 HERVK_113P61574 105 aa10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 RPL8P62917 257 aaKnown RBP10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 SP5Q6BEB4 398 aaPredicted RBP10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 ZNRF1Q8ND25 227 aa10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 SLC25A28Q96A46 364 aa10.39□□□□□ -0.75
TUBGCP4-208ENST00000564079 ZNF318Q5VUA4 2279 aa10.38□□□□□ -0.75
TUBGCP4-208ENST00000564079 PGA4P0DJD7 388 aa10.38□□□□□ -0.75
TUBGCP4-208ENST00000564079 RELQ04864 619 aaPredicted RBP10.38□□□□□ -0.75
TUBGCP4-208ENST00000564079 HERPUD1Q15011 391 aa10.38□□□□□ -0.75
TUBGCP4-208ENST00000564079 ATP6V1FQ16864 119 aa10.38□□□□□ -0.75
TUBGCP4-208ENST00000564079 CYB5R2Q6BCY4 276 aa10.38□□□□□ -0.75
TUBGCP4-208ENST00000564079 SSC4DQ8WTU2 575 aa10.38□□□□□ -0.75
TUBGCP4-208ENST00000564079 CBLN4Q9NTU7 201 aa10.38□□□□□ -0.75
TUBGCP4-208ENST00000564079 SELENOKQ9Y6D0 94 aa10.38□□□□□ -0.75
TUBGCP4-208ENST00000564079 C9JCJ5 164 aa10.38□□□□□ -0.75
TUBGCP4-208ENST00000564079 NPIPB6E9PJ23 425 aa10.38□□□□□ -0.75
TUBGCP4-208ENST00000564079 MPDU1O75352 247 aa10.38□□□□□ -0.75
TUBGCP4-208ENST00000564079 B2MP61769 119 aa10.38□□□□□ -0.75
TUBGCP4-208ENST00000564079 TEPPQ6URK8 271 aa10.38□□□□□ -0.75
TUBGCP4-208ENST00000564079 WDFY1Q8IWB7 410 aa10.38□□□□□ -0.75
TUBGCP4-208ENST00000564079 ZDHHC22Q8N966 263 aa10.38□□□□□ -0.75
TUBGCP4-208ENST00000564079 OR9G1Q8NH87 305 aa10.38□□□□□ -0.75
TUBGCP4-208ENST00000564079 ZPLD1Q8TCW7 415 aa10.38□□□□□ -0.75
TUBGCP4-208ENST00000564079 KIAA1551Q9HCM1 1747 aa10.38□□□□□ -0.75
TUBGCP4-208ENST00000564079 USF1P22415 310 aaPredicted RBP10.38□□□□□ -0.75
TUBGCP4-208ENST00000564079 ERVS71-1P61550 626 aa10.38□□□□□ -0.75
TUBGCP4-208ENST00000564079 SRSF7Q16629 238 aaKnown RBP eCLIP10.38□□□□□ -0.75
TUBGCP4-208ENST00000564079 PRSS8Q16651 343 aa10.38□□□□□ -0.75
TUBGCP4-208ENST00000564079 MMD2Q8IY49 270 aa10.38□□□□□ -0.75
TUBGCP4-208ENST00000564079 SMIM4Q8WVI0 70 aa10.38□□□□□ -0.75
TUBGCP4-208ENST00000564079 TCEAL7Q9BRU2 100 aa10.38□□□□□ -0.75
TUBGCP4-208ENST00000564079 PAXXQ9BUH6 204 aa10.38□□□□□ -0.75
TUBGCP4-208ENST00000564079 ZNF703Q9H7S9 590 aaPredicted RBP10.38□□□□□ -0.75
TUBGCP4-208ENST00000564079 NTN4Q9HB63 628 aa10.38□□□□□ -0.75
TUBGCP4-208ENST00000564079 IGHV3OR16-8A0A075B7F1 116 aa10.38□□□□□ -0.75
TUBGCP4-208ENST00000564079 C19orf67A6NJJ6 358 aa10.38□□□□□ -0.75
TUBGCP4-208ENST00000564079 FAM122BQ7Z309 247 aa10.38□□□□□ -0.75
TUBGCP4-208ENST00000564079 C9orf106Q8NAJ2 232 aa10.38□□□□□ -0.75
TUBGCP4-208ENST00000564079 ODAMA1E959 279 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms