RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 SPNP16150 400 aa16.2■□□□□ 0.18
HERC2-204ENST00000563945 MGMTP16455 207 aa16.2■□□□□ 0.18
HERC2-204ENST00000563945 CNTFRP26992 372 aa16.2■□□□□ 0.18
HERC2-204ENST00000563945 CHRNA7P36544 502 aa16.2■□□□□ 0.18
HERC2-204ENST00000563945 TMEM267Q0VDI3 215 aaPredicted RBP16.2■□□□□ 0.18
HERC2-204ENST00000563945 ASPHD1Q5U4P2 390 aa16.2■□□□□ 0.18
HERC2-204ENST00000563945 GAPTQ8N292 157 aa16.2■□□□□ 0.18
HERC2-204ENST00000563945 APH1BQ8WW43 257 aa16.2■□□□□ 0.18
HERC2-204ENST00000563945 DLX4Q92988 240 aaPredicted RBP16.2■□□□□ 0.18
HERC2-204ENST00000563945 GALMQ96C23 342 aa16.2■□□□□ 0.18
HERC2-204ENST00000563945 OR4C12Q96R67 309 aa16.2■□□□□ 0.18
HERC2-204ENST00000563945 SLC29A1Q99808 456 aa16.2■□□□□ 0.18
HERC2-204ENST00000563945 A0A1W2PPK0 400 aa16.19■□□□□ 0.18
HERC2-204ENST00000563945 YPEL1O60688 119 aa16.19■□□□□ 0.18
HERC2-204ENST00000563945 MAS1P04201 325 aa16.19■□□□□ 0.18
HERC2-204ENST00000563945 FRMD6-AS1P0C7T7 363 aa16.19■□□□□ 0.18
HERC2-204ENST00000563945 CD40LGP29965 261 aa16.19■□□□□ 0.18
HERC2-204ENST00000563945 CAPGP40121 348 aa16.19■□□□□ 0.18
HERC2-204ENST00000563945 HTD2P86397 168 aa16.19■□□□□ 0.18
HERC2-204ENST00000563945 GNMTQ14749 295 aa16.19■□□□□ 0.18
HERC2-204ENST00000563945 SMN1Q16637 294 aaKnown RBP16.19■□□□□ 0.18
HERC2-204ENST00000563945 CDH26Q8IXH8 852 aa16.19■□□□□ 0.18
HERC2-204ENST00000563945 MINDY2Q8NBR6 621 aa16.19■□□□□ 0.18
HERC2-204ENST00000563945 OR2AK2Q8NG84 335 aa16.19■□□□□ 0.18
HERC2-204ENST00000563945 RITA1Q96K30 269 aa16.19■□□□□ 0.18
HERC2-204ENST00000563945 YPEL2Q96QA6 119 aa16.19■□□□□ 0.18
HERC2-204ENST00000563945 ABRACLQ9P1F3 81 aa16.19■□□□□ 0.18
HERC2-204ENST00000563945 RNF150Q9ULK6 438 aa16.19■□□□□ 0.18
HERC2-204ENST00000563945 A3GALT2U3KPV4 340 aa16.19■□□□□ 0.18
HERC2-204ENST00000563945 TRAV8-7A0A075B6U6 113 aa16.18■□□□□ 0.18
HERC2-204ENST00000563945 MAGEA13PA6NCF6 341 aa16.18■□□□□ 0.18
HERC2-204ENST00000563945 SC5DO75845 299 aa16.18■□□□□ 0.18
HERC2-204ENST00000563945 FSTP19883 344 aa16.18■□□□□ 0.18
HERC2-204ENST00000563945 SLURP1P55000 103 aa16.18■□□□□ 0.18
HERC2-204ENST00000563945 PITPNAQ00169 270 aa16.18■□□□□ 0.18
HERC2-204ENST00000563945 ZNF660Q6AZW8 331 aaPredicted RBP16.18■□□□□ 0.18
HERC2-204ENST00000563945 TCTEX1D1Q8N7M0 179 aa16.18■□□□□ 0.18
HERC2-204ENST00000563945 NPBQ8NG41 125 aa16.18■□□□□ 0.18
HERC2-204ENST00000563945 FLYWCH2Q96CP2 140 aaKnown RBP16.18■□□□□ 0.18
HERC2-204ENST00000563945 ALX4Q9H161 411 aaPredicted RBP16.18■□□□□ 0.18
HERC2-204ENST00000563945 MBNL3Q9NUK0 354 aaKnown RBP16.18■□□□□ 0.18
HERC2-204ENST00000563945 STEAP1Q9UHE8 339 aa16.18■□□□□ 0.18
HERC2-204ENST00000563945 FOXA2Q9Y261 457 aaPredicted RBP16.18■□□□□ 0.18
HERC2-204ENST00000563945 PDCD6O75340 191 aa16.17■□□□□ 0.18
HERC2-204ENST00000563945 OR8U9P0C7N5 309 aa16.17■□□□□ 0.18
HERC2-204ENST00000563945 OR3A3P47888 321 aa16.17■□□□□ 0.18
HERC2-204ENST00000563945 DOC2BQ14184 412 aa16.17■□□□□ 0.18
HERC2-204ENST00000563945 DMKNQ6E0U4 476 aaPredicted RBP16.17■□□□□ 0.18
HERC2-204ENST00000563945 ZFP41Q8N8Y5 198 aa16.17■□□□□ 0.18
HERC2-204ENST00000563945 TMEM80Q96HE8 168 aa16.17■□□□□ 0.18
HERC2-204ENST00000563945 RDH12Q96NR8 316 aa16.17■□□□□ 0.18
HERC2-204ENST00000563945 NEDD4LQ96PU5 975 aa16.17■□□□□ 0.18
HERC2-204ENST00000563945 OR14A2Q96R54 314 aa16.17■□□□□ 0.18
HERC2-204ENST00000563945 TOLLIPQ9H0E2 274 aa16.17■□□□□ 0.18
HERC2-204ENST00000563945 DIMT1Q9UNQ2 313 aaKnown RBP16.17■□□□□ 0.18
HERC2-204ENST00000563945 WBP4O75554 376 aaKnown RBP16.16■□□□□ 0.18
HERC2-204ENST00000563945 LALBAP00709 142 aa16.16■□□□□ 0.18
HERC2-204ENST00000563945 GSTP1P09211 210 aaKnown RBP16.16■□□□□ 0.18
HERC2-204ENST00000563945 LGALS1P09382 135 aaKnown RBP16.16■□□□□ 0.18
HERC2-204ENST00000563945 SRSF7Q16629 238 aaKnown RBP eCLIP16.16■□□□□ 0.18
HERC2-204ENST00000563945 PYHIN1Q6K0P9 492 aa16.16■□□□□ 0.18
HERC2-204ENST00000563945 ACSM6Q6P461 480 aa16.16■□□□□ 0.18
HERC2-204ENST00000563945 ZNF833PQ6ZTB9 187 aa16.16■□□□□ 0.18
HERC2-204ENST00000563945 ODF3L1Q8IXM7 274 aa16.16■□□□□ 0.18
HERC2-204ENST00000563945 IL1F10Q8WWZ1 152 aa16.16■□□□□ 0.18
HERC2-204ENST00000563945 ARPC1AQ92747 370 aa16.16■□□□□ 0.18
HERC2-204ENST00000563945 Q96M66 194 aa16.16■□□□□ 0.18
HERC2-204ENST00000563945 ELOVL1Q9BW60 279 aa16.16■□□□□ 0.18
HERC2-204ENST00000563945 FBXL15Q9H469 300 aa16.16■□□□□ 0.18
HERC2-204ENST00000563945 PIPOXQ9P0Z9 390 aa16.16■□□□□ 0.18
HERC2-204ENST00000563945 CLEC2DQ9UHP7 191 aa16.16■□□□□ 0.18
HERC2-204ENST00000563945 SAA2-SAA4A0A096LPE2 208 aa16.15■□□□□ 0.18
HERC2-204ENST00000563945 NDUFA3O95167 84 aa16.15■□□□□ 0.18
HERC2-204ENST00000563945 BAG2O95816 211 aa16.15■□□□□ 0.18
HERC2-204ENST00000563945 SAA2P0DJI9 122 aaPredicted RBP16.15■□□□□ 0.18
HERC2-204ENST00000563945 TAS2R43P59537 309 aa16.15■□□□□ 0.18
HERC2-204ENST00000563945 CX3CL1P78423 397 aa16.15■□□□□ 0.18
HERC2-204ENST00000563945 LY6G6FQ5SQ64 297 aa16.15■□□□□ 0.18
HERC2-204ENST00000563945 MRPL30Q8TCC3 161 aaKnown RBP16.15■□□□□ 0.18
HERC2-204ENST00000563945 FAM46BQ96A09 425 aa16.15■□□□□ 0.18
HERC2-204ENST00000563945 GHRLQ9UBU3 117 aa16.15■□□□□ 0.18
HERC2-204ENST00000563945 IGHV4OR15-8A0A075B7B6 117 aa16.14■□□□□ 0.17
HERC2-204ENST00000563945 A0A087WW49 117 aa16.14■□□□□ 0.17
HERC2-204ENST00000563945 TRBV5-7A0A0A0MS05 114 aa16.14■□□□□ 0.17
HERC2-204ENST00000563945 PNMA8CA0A1B0GUJ8 204 aa16.14■□□□□ 0.17
HERC2-204ENST00000563945 H7C2Y5 167 aa16.14■□□□□ 0.17
HERC2-204ENST00000563945 RRHO14718 337 aa16.14■□□□□ 0.17
HERC2-204ENST00000563945 ARPC1BO15143 372 aaKnown RBP16.14■□□□□ 0.17
HERC2-204ENST00000563945 HSPB1P04792 205 aaKnown RBP16.14■□□□□ 0.17
HERC2-204ENST00000563945 MC5RP33032 325 aa16.14■□□□□ 0.17
HERC2-204ENST00000563945 FAM71F2Q6NXP2 309 aa16.14■□□□□ 0.17
HERC2-204ENST00000563945 FAM131AQ6UXB0 335 aa16.14■□□□□ 0.17
HERC2-204ENST00000563945 C5orf24Q7Z6I8 188 aa16.14■□□□□ 0.17
HERC2-204ENST00000563945 NKAIN3Q8N8D7 197 aa16.14■□□□□ 0.17
HERC2-204ENST00000563945 CASTOR1Q8WTX7 329 aa16.14■□□□□ 0.17
HERC2-204ENST00000563945 THRSPQ92748 146 aa16.14■□□□□ 0.17
HERC2-204ENST00000563945 UQCC2Q9BRT2 126 aa16.14■□□□□ 0.17
HERC2-204ENST00000563945 CHMP1AQ9HD42 196 aaPredicted RBP16.14■□□□□ 0.17
HERC2-204ENST00000563945 SMPD3Q9NY59 655 aaPredicted RBP16.14■□□□□ 0.17
HERC2-204ENST00000563945 FAM53CQ9NYF3 392 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms