RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 KIAA2026Q5HYC2 2103 aa16.84■□□□□ 0.29
MSLN-205ENST00000563941 hCG_1809904A0A1W2PP81 198 aa16.84■□□□□ 0.29
MSLN-205ENST00000563941 A0A1W2PR64 198 aa16.84■□□□□ 0.29
MSLN-205ENST00000563941 A0A1W2PRV1 198 aa16.84■□□□□ 0.29
MSLN-205ENST00000563941 WNT9BO14905 357 aa16.84■□□□□ 0.29
MSLN-205ENST00000563941 WISP2O76076 250 aa16.84■□□□□ 0.29
MSLN-205ENST00000563941 AGFG2O95081 481 aa16.84■□□□□ 0.29
MSLN-205ENST00000563941 ACAA1P09110 424 aaPredicted RBP16.84■□□□□ 0.29
MSLN-205ENST00000563941 CBR1P16152 277 aa16.84■□□□□ 0.29
MSLN-205ENST00000563941 RAB5AP20339 215 aa16.84■□□□□ 0.29
MSLN-205ENST00000563941 AGAP20933 346 aa16.84■□□□□ 0.29
MSLN-205ENST00000563941 SNRPEP62304 92 aaKnown RBP16.84■□□□□ 0.29
MSLN-205ENST00000563941 ARL16Q0P5N6 197 aa16.84■□□□□ 0.29
MSLN-205ENST00000563941 SRSF6Q13247 344 aaKnown RBP16.84■□□□□ 0.29
MSLN-205ENST00000563941 ZNF826PQ6ZT77 177 aa16.84■□□□□ 0.29
MSLN-205ENST00000563941 IQCF2Q8IXL9 164 aa16.84■□□□□ 0.29
MSLN-205ENST00000563941 ZNF561Q8N587 486 aa16.84■□□□□ 0.29
MSLN-205ENST00000563941 FDCSPQ8NFU4 85 aa16.84■□□□□ 0.29
MSLN-205ENST00000563941 OR1L1Q8NH94 360 aa16.84■□□□□ 0.29
MSLN-205ENST00000563941 CLDND2Q8NHS1 167 aa16.84■□□□□ 0.29
MSLN-205ENST00000563941 RSG1Q9BU20 258 aa16.84■□□□□ 0.29
MSLN-205ENST00000563941 RNF212BA8MTL3 300 aa16.83■□□□□ 0.28
MSLN-205ENST00000563941 HSPB1P04792 205 aaKnown RBP16.83■□□□□ 0.28
MSLN-205ENST00000563941 CEBPGP53567 150 aa16.83■□□□□ 0.28
MSLN-205ENST00000563941 ZNF525Q8N782 197 aa16.83■□□□□ 0.28
MSLN-205ENST00000563941 SCGB1C1Q8TD33 95 aa16.83■□□□□ 0.28
MSLN-205ENST00000563941 C12orf57Q99622 126 aa16.83■□□□□ 0.28
MSLN-205ENST00000563941 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.82■□□□□ 0.28
MSLN-205ENST00000563941 H3BQ15 152 aa16.82■□□□□ 0.28
MSLN-205ENST00000563941 FBP1P09467 338 aa16.82■□□□□ 0.28
MSLN-205ENST00000563941 CD82P27701 267 aa16.82■□□□□ 0.28
MSLN-205ENST00000563941 HOXC12P31275 282 aa16.82■□□□□ 0.28
MSLN-205ENST00000563941 OR3A1P47881 315 aa16.82■□□□□ 0.28
MSLN-205ENST00000563941 RPS23P62266 143 aaKnown RBP16.82■□□□□ 0.28
MSLN-205ENST00000563941 HAPLN4Q86UW8 402 aa16.82■□□□□ 0.28
MSLN-205ENST00000563941 C11orf53Q8IXP5 236 aa16.82■□□□□ 0.28
MSLN-205ENST00000563941 GTF3C1Q12789 2109 aa16.82■□□□□ 0.28
MSLN-205ENST00000563941 IGKV3-15P01624 115 aa16.82■□□□□ 0.28
MSLN-205ENST00000563941 HOXB1P14653 301 aaPredicted RBP16.82■□□□□ 0.28
MSLN-205ENST00000563941 HOXA4Q00056 320 aaPredicted RBP16.82■□□□□ 0.28
MSLN-205ENST00000563941 VWA1Q6PCB0 445 aa16.82■□□□□ 0.28
MSLN-205ENST00000563941 FGFRL1Q8N441 504 aa16.82■□□□□ 0.28
MSLN-205ENST00000563941 ZNF645Q8N7E2 425 aa16.82■□□□□ 0.28
MSLN-205ENST00000563941 WDR31Q8NA23 367 aa16.82■□□□□ 0.28
MSLN-205ENST00000563941 GALMQ96C23 342 aa16.82■□□□□ 0.28
MSLN-205ENST00000563941 C12orf77C9JDV5 145 aa16.81■□□□□ 0.28
MSLN-205ENST00000563941 COX5AP20674 150 aa16.81■□□□□ 0.28
MSLN-205ENST00000563941 KIR2DL2P43627 348 aaPredicted RBP16.81■□□□□ 0.28
MSLN-205ENST00000563941 HBG1P69891 147 aa16.81■□□□□ 0.28
MSLN-205ENST00000563941 HBG2P69892 147 aa16.81■□□□□ 0.28
MSLN-205ENST00000563941 CYB561D1Q8N8Q1 229 aa16.81■□□□□ 0.28
MSLN-205ENST00000563941 OR2D2Q9H210 308 aa16.81■□□□□ 0.28
MSLN-205ENST00000563941 RNF150Q9ULK6 438 aa16.81■□□□□ 0.28
MSLN-205ENST00000563941 TRAV1-1A0A0B4J248 108 aa16.81■□□□□ 0.28
MSLN-205ENST00000563941 C1QTNF9BB2RNN3 333 aa16.81■□□□□ 0.28
MSLN-205ENST00000563941 OR2C1O95371 312 aa16.81■□□□□ 0.28
MSLN-205ENST00000563941 EIF2S3LQ2VIR3 472 aaKnown RBP16.81■□□□□ 0.28
MSLN-205ENST00000563941 SLC35E4Q6ICL7 350 aa16.81■□□□□ 0.28
MSLN-205ENST00000563941 LILRB2Q8N423 598 aa16.81■□□□□ 0.28
MSLN-205ENST00000563941 C9orf106Q8NAJ2 232 aa16.81■□□□□ 0.28
MSLN-205ENST00000563941 RAB39BQ96DA2 213 aa16.81■□□□□ 0.28
MSLN-205ENST00000563941 CXXC4Q9H2H0 198 aa16.81■□□□□ 0.28
MSLN-205ENST00000563941 MMP24Q9Y5R2 645 aa16.81■□□□□ 0.28
MSLN-205ENST00000563941 C5orf52A6NGY3 159 aa16.8■□□□□ 0.28
MSLN-205ENST00000563941 S100A6P06703 90 aa16.8■□□□□ 0.28
MSLN-205ENST00000563941 IL2RGP31785 369 aa16.8■□□□□ 0.28
MSLN-205ENST00000563941 AESQ08117 197 aa16.8■□□□□ 0.28
MSLN-205ENST00000563941 SPANXN5Q5MJ07 72 aa16.8■□□□□ 0.28
MSLN-205ENST00000563941 FAM53AQ6NSI3 398 aaPredicted RBP16.8■□□□□ 0.28
MSLN-205ENST00000563941 OR52L2PQ8NGH6 319 aa16.8■□□□□ 0.28
MSLN-205ENST00000563941 RPRMQ9NS64 109 aa16.8■□□□□ 0.28
MSLN-205ENST00000563941 OOEPA6NGQ2 149 aa16.79■□□□□ 0.28
MSLN-205ENST00000563941 AQP7O14520 342 aa16.79■□□□□ 0.28
MSLN-205ENST00000563941 KHDC3LQ587J8 217 aa16.79■□□□□ 0.28
MSLN-205ENST00000563941 PRAMEF6Q5VXH4 476 aa16.79■□□□□ 0.28
MSLN-205ENST00000563941 ACP7Q6ZNF0 438 aa16.79■□□□□ 0.28
MSLN-205ENST00000563941 ZNF429Q86V71 674 aa16.79■□□□□ 0.28
MSLN-205ENST00000563941 ZBTB34Q8NCN2 500 aa16.79■□□□□ 0.28
MSLN-205ENST00000563941 MALSU1Q96EH3 234 aa16.79■□□□□ 0.28
MSLN-205ENST00000563941 C5orf30Q96GV9 206 aa16.79■□□□□ 0.28
MSLN-205ENST00000563941 YPEL4Q96NS1 127 aa16.79■□□□□ 0.28
MSLN-205ENST00000563941 PSMG3Q9BT73 122 aaPredicted RBP16.79■□□□□ 0.28
MSLN-205ENST00000563941 VSIRQ9H7M9 311 aa16.79■□□□□ 0.28
MSLN-205ENST00000563941 LOC102723971A0A1B0GUV8 181 aa16.79■□□□□ 0.28
MSLN-205ENST00000563941 A0A1W2PPE3 182 aa16.79■□□□□ 0.28
MSLN-205ENST00000563941 FAM90A26D6RGX4 464 aa16.79■□□□□ 0.28
MSLN-205ENST00000563941 TIMM8AO60220 97 aaPredicted RBP16.79■□□□□ 0.28
MSLN-205ENST00000563941 RAMP3O60896 148 aa16.79■□□□□ 0.28
MSLN-205ENST00000563941 EIF3GO75821 320 aaKnown RBP eCLIP16.79■□□□□ 0.28
MSLN-205ENST00000563941 HBZP02008 142 aa16.79■□□□□ 0.28
MSLN-205ENST00000563941 TFF1P04155 84 aa16.79■□□□□ 0.28
MSLN-205ENST00000563941 MEOX2P50222 304 aa16.79■□□□□ 0.28
MSLN-205ENST00000563941 UBE2KP61086 200 aa16.79■□□□□ 0.28
MSLN-205ENST00000563941 LRRC75BQ2VPJ9 315 aa16.79■□□□□ 0.28
MSLN-205ENST00000563941 ADAM5Q6NVV9 412 aa16.79■□□□□ 0.28
MSLN-205ENST00000563941 C1orf162Q8NEQ5 155 aaPredicted RBP16.79■□□□□ 0.28
MSLN-205ENST00000563941 COQ2Q96H96 371 aa16.79■□□□□ 0.28
MSLN-205ENST00000563941 FZR1Q9UM11 496 aa16.79■□□□□ 0.28
MSLN-205ENST00000563941 PPIHO43447 177 aaKnown RBP16.78■□□□□ 0.28
MSLN-205ENST00000563941 OR8U8P0C7N1 319 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms