RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 PDGFBP01127 241 aaPredicted RBP11.06□□□□□ -0.64
USB1-207ENST00000563149 OPN1MWP04001 364 aa11.06□□□□□ -0.64
USB1-207ENST00000563149 PGA5P0DJD9 388 aa11.06□□□□□ -0.64
USB1-207ENST00000563149 OPN1MW2P0DN77 364 aa11.06□□□□□ -0.64
USB1-207ENST00000563149 OPN1MW3P0DN78 364 aa11.06□□□□□ -0.64
USB1-207ENST00000563149 SELEP16581 610 aa11.06□□□□□ -0.64
USB1-207ENST00000563149 MEOX1P50221 254 aa11.06□□□□□ -0.64
USB1-207ENST00000563149 CD81P60033 236 aa11.06□□□□□ -0.64
USB1-207ENST00000563149 GABRA6Q16445 453 aa11.06□□□□□ -0.64
USB1-207ENST00000563149 DNLZQ5SXM8 178 aa11.06□□□□□ -0.64
USB1-207ENST00000563149 TMEM164Q5U3C3 297 aa11.06□□□□□ -0.64
USB1-207ENST00000563149 FIP1L1Q6UN15 594 aaKnown RBP11.06□□□□□ -0.64
USB1-207ENST00000563149 TMEM14EPQ6UXP3 125 aa11.06□□□□□ -0.64
USB1-207ENST00000563149 HAPLN4Q86UW8 402 aa11.06□□□□□ -0.64
USB1-207ENST00000563149 DRAM1Q8N682 238 aa11.06□□□□□ -0.64
USB1-207ENST00000563149 SCCPDHQ8NBX0 429 aa11.06□□□□□ -0.64
USB1-207ENST00000563149 TAF15Q92804 592 aaKnown RBP eCLIP11.06□□□□□ -0.64
USB1-207ENST00000563149 RCC1LQ96I51 464 aaKnown RBP11.06□□□□□ -0.64
USB1-207ENST00000563149 AGMATQ9BSE5 352 aa11.06□□□□□ -0.64
USB1-207ENST00000563149 ZNF665Q9H7R5 613 aa11.06□□□□□ -0.64
USB1-207ENST00000563149 KCNS2Q9ULS6 477 aa11.06□□□□□ -0.64
USB1-207ENST00000563149 TRBV24-1A0A075B6N3 115 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 TGIF2-C20orf24A0A0A6YYL0 155 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 A0A1W2PR80 420 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 SIRPB1O00241 398 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 HIST1H2BKO60814 126 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 YIF1AO95070 293 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 MT-CO3P00414 261 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 HIST1H2BJP06899 126 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 HIST1H2BOP23527 126 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 HIST1H2BBP33778 126 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 CEACAM6P40199 344 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 HIST1H2BDP58876 126 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 HIST1H2BCP62807 126 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 HIST2H2BEQ16778 126 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 IZUMO4Q1ZYL8 232 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.05□□□□□ -0.64
USB1-207ENST00000563149 LCN15Q6UWW0 184 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 FGFRL1Q8N441 504 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 ZNF645Q8N7E2 425 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 TCTEX1D1Q8N7M0 179 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 HIST1H2BHQ93079 126 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 FAM210BQ96KR6 192 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 OR4C12Q96R67 309 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 HIST1H2BNQ99877 126 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 HIST1H2BMQ99879 126 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 VSIRQ9H7M9 311 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 KCNIP1Q9NZI2 227 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 DOCK10Q96BY6 2186 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 MAP1LC3B2A6NCE7 125 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 MBP02144 154 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 RAC2P15153 192 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 ZNF16P17020 682 aaPredicted RBP11.05□□□□□ -0.64
USB1-207ENST00000563149 NKX6-1P78426 367 aaPredicted RBP11.05□□□□□ -0.64
USB1-207ENST00000563149 SLC38A11Q08AI6 406 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 SPANXN5Q5MJ07 72 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 WDR86Q86TI4 376 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 TMEM105Q8N8V8 129 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 MDS2Q8NDY4 140 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 MAP1LC3BQ9GZQ8 125 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 SLC39A9Q9NUM3 307 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 PLA2G3Q9NZ20 509 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 HSPB7Q9UBY9 170 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 ZMAT5Q9UDW3 170 aaKnown RBP11.05□□□□□ -0.64
USB1-207ENST00000563149 URGCP-MRPS24S4R325 110 aa11.05□□□□□ -0.64
USB1-207ENST00000563149 IQCF6A8MYZ5 107 aa11.04□□□□□ -0.64
USB1-207ENST00000563149 SMPD2O60906 423 aa11.04□□□□□ -0.64
USB1-207ENST00000563149 WDR1O75083 606 aa11.04□□□□□ -0.64
USB1-207ENST00000563149 NXPH2O95156 264 aa11.04□□□□□ -0.64
USB1-207ENST00000563149 PPP1CBP62140 327 aa11.04□□□□□ -0.64
USB1-207ENST00000563149 TNFRSF9Q07011 255 aa11.04□□□□□ -0.64
USB1-207ENST00000563149 LINC00696Q6ZRV3 163 aa11.04□□□□□ -0.64
USB1-207ENST00000563149 WDYHV1Q96HA8 205 aa11.04□□□□□ -0.64
USB1-207ENST00000563149 FER1L6-AS2Q96M78 137 aa11.04□□□□□ -0.64
USB1-207ENST00000563149 CDX2Q99626 313 aaPredicted RBP11.04□□□□□ -0.64
USB1-207ENST00000563149 BCL2L14Q9BZR8 327 aa11.04□□□□□ -0.64
USB1-207ENST00000563149 C12orf49Q9H741 205 aa11.04□□□□□ -0.64
USB1-207ENST00000563149 CDH20Q9HBT6 801 aa11.04□□□□□ -0.64
USB1-207ENST00000563149 FOXJ2Q9P0K8 574 aa11.04□□□□□ -0.64
USB1-207ENST00000563149 NAT8Q9UHE5 227 aa11.04□□□□□ -0.64
USB1-207ENST00000563149 TMEM30CPA0ZSE6 113 aa11.03□□□□□ -0.64
USB1-207ENST00000563149 IFITM10A6NMD0 228 aa11.03□□□□□ -0.64
USB1-207ENST00000563149 CEBPZOSA8MTT3 80 aa11.03□□□□□ -0.64
USB1-207ENST00000563149 PPP1R2P9O14990 202 aa11.03□□□□□ -0.64
USB1-207ENST00000563149 ZNF737O75373 536 aa11.03□□□□□ -0.64
USB1-207ENST00000563149 PTBP3O95758 552 aaKnown RBP11.03□□□□□ -0.64
USB1-207ENST00000563149 TRGC2P03986 189 aa11.03□□□□□ -0.64
USB1-207ENST00000563149 CD46P15529 392 aa11.03□□□□□ -0.64
USB1-207ENST00000563149 CATR1Q13166 79 aa11.03□□□□□ -0.64
USB1-207ENST00000563149 SLC35E4Q6ICL7 350 aa11.03□□□□□ -0.64
USB1-207ENST00000563149 PRR18Q8N4B5 295 aa11.03□□□□□ -0.64
USB1-207ENST00000563149 MRPL37Q9BZE1 423 aaKnown RBP11.03□□□□□ -0.64
USB1-207ENST00000563149 OR51B6Q9H340 312 aa11.03□□□□□ -0.64
USB1-207ENST00000563149 RBKSQ9H477 322 aa11.03□□□□□ -0.64
USB1-207ENST00000563149 HES4Q9HCC6 221 aa11.03□□□□□ -0.64
USB1-207ENST00000563149 ARHGAP21Q5T5U3 1957 aa11.03□□□□□ -0.64
USB1-207ENST00000563149 OOEPA6NGQ2 149 aa11.03□□□□□ -0.64
USB1-207ENST00000563149 TMEM250H0YL14 139 aa11.03□□□□□ -0.64
USB1-207ENST00000563149 P0C879 139 aa11.03□□□□□ -0.64
USB1-207ENST00000563149 C3AR1Q16581 482 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms