RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 B3GALT5-AS1P59052 145 aa6.5□□□□□ -1.37
TCF4-216ENST00000562680 TCF15Q12870 199 aa6.5□□□□□ -1.37
TCF4-216ENST00000562680 GAMTQ14353 236 aa6.5□□□□□ -1.37
TCF4-216ENST00000562680 SNAI3Q3KNW1 292 aa6.5□□□□□ -1.37
TCF4-216ENST00000562680 DMRTC1Q5HYR2 192 aa6.5□□□□□ -1.37
TCF4-216ENST00000562680 GCSAMQ8N6F7 178 aa6.5□□□□□ -1.37
TCF4-216ENST00000562680 SOX7Q9BT81 388 aa6.5□□□□□ -1.37
TCF4-216ENST00000562680 DENND4AQ7Z401 1863 aa6.5□□□□□ -1.37
TCF4-216ENST00000562680 MUC22E2RYF6 1773 aaPredicted RBP6.5□□□□□ -1.37
TCF4-216ENST00000562680 IGKV1D-43A0A0B4J1Z2 117 aa6.5□□□□□ -1.37
TCF4-216ENST00000562680 A0A1W2PPV4 95 aa6.5□□□□□ -1.37
TCF4-216ENST00000562680 PDE6DO43924 150 aa6.5□□□□□ -1.37
TCF4-216ENST00000562680 FAM87AP0C7U9 286 aa6.5□□□□□ -1.37
TCF4-216ENST00000562680 SULT1A3P0DMM9 295 aa6.5□□□□□ -1.37
TCF4-216ENST00000562680 SULT1A4P0DMN0 295 aa6.5□□□□□ -1.37
TCF4-216ENST00000562680 RPA2P15927 270 aa6.5□□□□□ -1.37
TCF4-216ENST00000562680 CD200P41217 278 aa6.5□□□□□ -1.37
TCF4-216ENST00000562680 CDKN1BP46527 198 aa6.5□□□□□ -1.37
TCF4-216ENST00000562680 DHRS2Q13268 280 aa6.5□□□□□ -1.37
TCF4-216ENST00000562680 NCR3LG1Q68D85 454 aa6.5□□□□□ -1.37
TCF4-216ENST00000562680 ZNF626Q68DY1 528 aa6.5□□□□□ -1.37
TCF4-216ENST00000562680 ZNF808Q8N4W9 903 aaPredicted RBP6.5□□□□□ -1.37
TCF4-216ENST00000562680 ZIC4Q8N9L1 334 aa6.5□□□□□ -1.37
TCF4-216ENST00000562680 Q8NFD4 153 aa6.5□□□□□ -1.37
TCF4-216ENST00000562680 REPIN1Q9BWE0 567 aaKnown RBP6.5□□□□□ -1.37
TCF4-216ENST00000562680 SMIM3Q9BZL3 60 aa6.5□□□□□ -1.37
TCF4-216ENST00000562680 COMMD5Q9GZQ3 224 aa6.5□□□□□ -1.37
TCF4-216ENST00000562680 TGIF2-C20orf24A0A0A6YYL0 155 aa6.5□□□□□ -1.37
TCF4-216ENST00000562680 SFTA3P0C7M3 94 aa6.5□□□□□ -1.37
TCF4-216ENST00000562680 CEACAM6P40199 344 aa6.5□□□□□ -1.37
TCF4-216ENST00000562680 AKR1C3P42330 323 aa6.5□□□□□ -1.37
TCF4-216ENST00000562680 MMP26Q9NRE1 261 aa6.5□□□□□ -1.37
TCF4-216ENST00000562680 SPRR3Q9UBC9 169 aa6.5□□□□□ -1.37
TCF4-216ENST00000562680 SSUH2Q9Y2M2 353 aa6.5□□□□□ -1.37
TCF4-216ENST00000562680 PMELP40967 661 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 ARF6P62330 175 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 ZNF260Q3ZCT1 412 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 ZNF485Q8NCK3 441 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 RNASE6Q93091 150 aaKnown RBP6.49□□□□□ -1.37
TCF4-216ENST00000562680 ADGRG7Q96K78 797 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 SNX22Q96L94 193 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 C20orf24Q9BUV8 137 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 MSL2Q9HCI7 577 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 TIMM8BQ9Y5J9 83 aaPredicted RBP6.49□□□□□ -1.37
TCF4-216ENST00000562680 M0R1X1 148 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 SLC17A3O00476 420 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 FGF2P09038 288 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 SULT1A2P50226 295 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 TAS2R30P59541 319 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 FOXL2NBQ6ZUU3 175 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 BEND2Q8NDZ0 799 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 SLC25A38Q96DW6 304 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 RAB27BO00194 218 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 HLA-DQB1P01920 261 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 IGHV1-2P23083 117 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 ERHP84090 104 aaKnown RBP6.49□□□□□ -1.37
TCF4-216ENST00000562680 OR4A47Q6IF82 309 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 KCNIP4Q6PIL6 250 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 FAM24BQ8N5W8 94 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 LFNGQ8NES3 379 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 OR13D1Q8NGV5 346 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 VSTM2AQ8TAG5 236 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 ANAPC16Q96DE5 110 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 POM121L2Q96KW2 1035 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 Q96M66 194 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 HEXA-AS1Q9H8Q6 139 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 UMAD1C9J7I0 102 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 PPP5D1E7EU14 171 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 K7ENP7 123 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 CECR9P0C854 216 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 PTHLHP12272 177 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 HES1Q14469 280 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 FAM90A1Q86YD7 464 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 NTNG2Q96CW9 530 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 RAB40CQ96S21 281 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 TMEM208Q9BTX3 173 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 SEPSECSQ9HD40 501 aaKnown RBP6.49□□□□□ -1.37
TCF4-216ENST00000562680 PLSCR4Q9NRQ2 329 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 FKBP11Q9NYL4 201 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 A0A1B0GTI1 187 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 C9orf170A2RU37 121 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 PROB1E7EW31 1015 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 C3orf80F5H4A9 247 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 PPYP01298 95 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 PI3P19957 117 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 PRDX2P32119 198 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 TOMM20LQ6UXN7 152 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 SLC25A42Q86VD7 318 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 SHISA5Q8N114 240 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 KCNRGQ8N5I3 272 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 ZNRF4Q8WWF5 429 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 FRZBQ92765 325 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 SLC35E1Q96K37 410 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 TMEM231Q9H6L2 316 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 TAF9BQ9HBM6 251 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 STRAPQ9Y3F4 350 aaKnown RBP6.49□□□□□ -1.37
TCF4-216ENST00000562680 CSAG2Q9Y5P2 127 aa6.49□□□□□ -1.37
TCF4-216ENST00000562680 MBD3L4A6NDZ8 208 aaPredicted RBP6.48□□□□□ -1.37
TCF4-216ENST00000562680 MBD3L3A6NE82 208 aaPredicted RBP6.48□□□□□ -1.37
TCF4-216ENST00000562680 MBD3L5A6NJ08 208 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms