RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 OXGR1Q96P68 337 aa3.23□□□□□ -1.89
LRRC28-222ENST00000561431 OR4F4Q96R69 305 aa3.23□□□□□ -1.89
LRRC28-222ENST00000561431 CHIAQ9BZP6 476 aa3.23□□□□□ -1.89
LRRC28-222ENST00000561431 MAP1LC3AQ9H492 121 aa3.23□□□□□ -1.89
LRRC28-222ENST00000561431 WFDC1Q9HC57 220 aa3.23□□□□□ -1.89
LRRC28-222ENST00000561431 ACOT13Q9NPJ3 140 aa3.23□□□□□ -1.89
LRRC28-222ENST00000561431 MIEF1Q9NQG6 463 aa3.23□□□□□ -1.89
LRRC28-222ENST00000561431 VPS29Q9UBQ0 182 aa3.23□□□□□ -1.89
LRRC28-222ENST00000561431 MOKQ9UQ07 419 aa3.23□□□□□ -1.89
LRRC28-222ENST00000561431 LRRK2Q5S007 2527 aa3.23□□□□□ -1.89
LRRC28-222ENST00000561431 SPTA1P02549 2419 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 SPTBP11277 2137 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 IGHV4-30-2A0A087WSY4 118 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 A0A0G2JN53 185 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 A0A1B0GVG6 124 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 IGSF23A1L1A6 192 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 FAM25AB3EWG3 89 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 FAM25CB3EWG5 89 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 FAM25GB3EWG6 89 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 G3V2L1 256 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 ZNF593O00488 134 aaPredicted RBP3.22□□□□□ -1.89
LRRC28-222ENST00000561431 TAAR5O14804 337 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 CHST10O43529 356 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 ENSAO43768 121 aaKnown RBP3.22□□□□□ -1.89
LRRC28-222ENST00000561431 VENTXO95231 258 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 CLIC3O95833 236 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 MT-CO2P00403 227 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 IFNA4P05014 189 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 S100A8P05109 93 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 MYL12AP19105 171 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 TBPP20226 339 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 TAC1P20366 129 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 GZMHP20718 246 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 HIST1H1TP22492 207 aaPredicted RBP3.22□□□□□ -1.89
LRRC28-222ENST00000561431 S100GP29377 79 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 IL12AP29459 219 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 PHBP35232 272 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 CRYBA2P53672 197 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 NDUFV3P56181 108 aaKnown RBP3.22□□□□□ -1.89
LRRC28-222ENST00000561431 RPS27AP62979 156 aaKnown RBP3.22□□□□□ -1.89
LRRC28-222ENST00000561431 GNG3P63215 75 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 SRPXP78539 464 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 BTG2P78543 158 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 BAMBIQ13145 260 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 OR5I1Q13606 314 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 OXA1LQ15070 435 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 ZNF146Q15072 292 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 SMIM21Q3B7S5 101 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 ARHGAP11BQ3KRB8 267 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 FAM219BQ5XKK7 198 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 HBMQ6B0K9 141 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 LRRC28Q86X40 367 aaPredicted RBP3.22□□□□□ -1.89
LRRC28-222ENST00000561431 SLC34A3Q8N130 599 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 RNF175Q8N4F7 328 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 GATD1Q8NB37 220 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 PLPP5Q8NEB5 264 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 OR1K1Q8NGR3 316 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 STAG3L4Q8TBR4 150 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 PIFOQ8TCI5 191 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 SLC7A13Q8TCU3 470 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 ABHD3Q8WU67 409 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 TMEM203Q969S6 136 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 RCN3Q96D15 328 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 BTF3L4Q96K17 158 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 EBF4Q9BQW3 602 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 CHCHD5Q9BSY4 110 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 EFCAB11Q9BUY7 163 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 GGACTQ9BVM4 153 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 OSBPL11Q9BXB4 747 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 TMEM59Q9BXS4 323 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 MS4A8Q9BY19 250 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 FNDC4Q9H6D8 234 aaPredicted RBP3.22□□□□□ -1.89
LRRC28-222ENST00000561431 MOB1AQ9H8S9 216 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 ASF1BQ9NVP2 202 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 FAIMQ9NVQ4 179 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 Q9UF83 564 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 PRO0628Q9UI54 55 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 ZNF223Q9UK11 482 aaPredicted RBP3.22□□□□□ -1.89
LRRC28-222ENST00000561431 KCNIP3Q9Y2W7 256 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 SIGLEC9Q9Y336 463 aa3.22□□□□□ -1.89
LRRC28-222ENST00000561431 PRRC2CQ9Y520 2896 aaKnown RBP3.22□□□□□ -1.89
LRRC28-222ENST00000561431 PTPN13Q12923 2485 aa3.21□□□□□ -1.89
LRRC28-222ENST00000561431 MDC1Q14676 2089 aaKnown RBP3.21□□□□□ -1.89
LRRC28-222ENST00000561431 HEATR5BQ9P2D3 2071 aa3.21□□□□□ -1.89
LRRC28-222ENST00000561431 MED13Q9UHV7 2174 aa3.21□□□□□ -1.9
LRRC28-222ENST00000561431 FLNBO75369 2602 aaKnown RBP3.21□□□□□ -1.9
LRRC28-222ENST00000561431 TRGV8A0A0C4DH27 118 aa3.21□□□□□ -1.9
LRRC28-222ENST00000561431 IGHV3-38A0A0C4DH36 116 aa3.21□□□□□ -1.9
LRRC28-222ENST00000561431 A0A0G2JMP0 313 aa3.21□□□□□ -1.9
LRRC28-222ENST00000561431 EXOC1LA0A1B0GW35 172 aa3.21□□□□□ -1.9
LRRC28-222ENST00000561431 LYRM9A8MSI8 78 aa3.21□□□□□ -1.9
LRRC28-222ENST00000561431 TRIM49D1C9J1S8 452 aa3.21□□□□□ -1.9
LRRC28-222ENST00000561431 CCL21O00585 134 aa3.21□□□□□ -1.9
LRRC28-222ENST00000561431 SOCS3O14543 225 aa3.21□□□□□ -1.9
LRRC28-222ENST00000561431 EEDO75530 441 aaKnown RBP3.21□□□□□ -1.9
LRRC28-222ENST00000561431 SEMG1P04279 462 aa3.21□□□□□ -1.9
LRRC28-222ENST00000561431 CRYGDP07320 174 aa3.21□□□□□ -1.9
LRRC28-222ENST00000561431 HTR1AP08908 422 aa3.21□□□□□ -1.9
LRRC28-222ENST00000561431 GPX2P18283 190 aa3.21□□□□□ -1.9
LRRC28-222ENST00000561431 CXCR1P25024 350 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms