RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 OR5I1Q13606 314 aa14.04□□□□□ -0.16
TPM1-228ENST00000560975 ZIC4Q8N9L1 334 aa14.04□□□□□ -0.16
TPM1-228ENST00000560975 RNF138Q8WVD3 245 aa14.04□□□□□ -0.16
TPM1-228ENST00000560975 IGLV3-32A0A0A0MS00 114 aa14.04□□□□□ -0.16
TPM1-228ENST00000560975 TRAV39A0A0B4J263 110 aa14.04□□□□□ -0.16
TPM1-228ENST00000560975 PGPEP1LA6NFU8 196 aa14.04□□□□□ -0.16
TPM1-228ENST00000560975 ZFAND5O76080 213 aa14.04□□□□□ -0.16
TPM1-228ENST00000560975 S100GP29377 79 aa14.04□□□□□ -0.16
TPM1-228ENST00000560975 BRS3P32247 399 aa14.04□□□□□ -0.16
TPM1-228ENST00000560975 MRPS11P82912 194 aaKnown RBP14.04□□□□□ -0.16
TPM1-228ENST00000560975 RHBDD2Q6NTF9 364 aa14.04□□□□□ -0.16
TPM1-228ENST00000560975 C20orf204Q6ZNR8 217 aa14.04□□□□□ -0.16
TPM1-228ENST00000560975 DTD1Q8TEA8 209 aa14.04□□□□□ -0.16
TPM1-228ENST00000560975 TNFSF11O14788 317 aa14.03□□□□□ -0.16
TPM1-228ENST00000560975 TYMSP04818 313 aa14.03□□□□□ -0.16
TPM1-228ENST00000560975 RPL15P61313 204 aaKnown RBP14.03□□□□□ -0.16
TPM1-228ENST00000560975 PSG4Q00888 419 aa14.03□□□□□ -0.16
TPM1-228ENST00000560975 HLA-BQ31612 363 aa14.03□□□□□ -0.16
TPM1-228ENST00000560975 PLXDC1Q8IUK5 500 aa14.03□□□□□ -0.16
TPM1-228ENST00000560975 PRR18Q8N4B5 295 aa14.03□□□□□ -0.16
TPM1-228ENST00000560975 PATZ1Q9HBE1 687 aaKnown RBP14.03□□□□□ -0.16
TPM1-228ENST00000560975 ZNF816-ZNF321PA0A0X1KG74 233 aa14.03□□□□□ -0.16
TPM1-228ENST00000560975 HS3ST1O14792 307 aa14.03□□□□□ -0.16
TPM1-228ENST00000560975 TIAF1O95411 115 aa14.03□□□□□ -0.16
TPM1-228ENST00000560975 IGKV1-5P01602 117 aa14.03□□□□□ -0.16
TPM1-228ENST00000560975 EDN3P14138 238 aa14.03□□□□□ -0.16
TPM1-228ENST00000560975 CD38P28907 300 aa14.03□□□□□ -0.16
TPM1-228ENST00000560975 RNPS1Q15287 305 aaKnown RBP14.03□□□□□ -0.16
TPM1-228ENST00000560975 OR10G9Q8NGN4 311 aa14.03□□□□□ -0.16
TPM1-228ENST00000560975 OR10G7Q8NGN6 311 aa14.03□□□□□ -0.16
TPM1-228ENST00000560975 CMTM2Q8TAZ6 248 aa14.03□□□□□ -0.16
TPM1-228ENST00000560975 KIR2DS1A0A191URI9 304 aa14.02□□□□□ -0.16
TPM1-228ENST00000560975 TCF21O43680 179 aa14.02□□□□□ -0.16
TPM1-228ENST00000560975 CLDN1O95832 211 aa14.02□□□□□ -0.16
TPM1-228ENST00000560975 NPPCP23582 126 aa14.02□□□□□ -0.16
TPM1-228ENST00000560975 MPLP40238 635 aa14.02□□□□□ -0.16
TPM1-228ENST00000560975 KIR2DS4P43632 304 aa14.02□□□□□ -0.16
TPM1-228ENST00000560975 GPM6AP51674 278 aa14.02□□□□□ -0.16
TPM1-228ENST00000560975 PPP1CBP62140 327 aa14.02□□□□□ -0.16
TPM1-228ENST00000560975 KIR2DS1Q14954 304 aa14.02□□□□□ -0.16
TPM1-228ENST00000560975 RDH5Q92781 318 aa14.02□□□□□ -0.16
TPM1-228ENST00000560975 SPACA9Q96E40 222 aaPredicted RBP14.02□□□□□ -0.16
TPM1-228ENST00000560975 ATP23Q9Y6H3 246 aa14.02□□□□□ -0.16
TPM1-228ENST00000560975 TOX3O15405 576 aaPredicted RBP14.02□□□□□ -0.17
TPM1-228ENST00000560975 CCNOP22674 350 aa14.02□□□□□ -0.17
TPM1-228ENST00000560975 NTF4P34130 210 aa14.02□□□□□ -0.17
TPM1-228ENST00000560975 ADMP35318 185 aa14.02□□□□□ -0.17
TPM1-228ENST00000560975 UBE2G2P60604 165 aa14.02□□□□□ -0.17
TPM1-228ENST00000560975 GAGE1Q13065 139 aa14.02□□□□□ -0.17
TPM1-228ENST00000560975 PCSK4Q6UW60 755 aa14.02□□□□□ -0.17
TPM1-228ENST00000560975 Q6ZWC4 215 aa14.02□□□□□ -0.17
TPM1-228ENST00000560975 NEIL1Q96FI4 390 aaPredicted RBP14.02□□□□□ -0.17
TPM1-228ENST00000560975 MIEN1Q9BRT3 115 aa14.02□□□□□ -0.17
TPM1-228ENST00000560975 DEFB126Q9BYW3 111 aa14.02□□□□□ -0.17
TPM1-228ENST00000560975 OR2J1Q9GZK6 312 aa14.02□□□□□ -0.17
TPM1-228ENST00000560975 CRIM1Q9NZV1 1036 aa14.02□□□□□ -0.17
TPM1-228ENST00000560975 RBM7Q9Y580 266 aaKnown RBP14.02□□□□□ -0.17
TPM1-228ENST00000560975 TRAPPC6AO75865 159 aa14.01□□□□□ -0.17
TPM1-228ENST00000560975 C1QTNF9P0C862 333 aa14.01□□□□□ -0.17
TPM1-228ENST00000560975 HNF1AP20823 631 aa14.01□□□□□ -0.17
TPM1-228ENST00000560975 CDKN1AP38936 164 aa14.01□□□□□ -0.17
TPM1-228ENST00000560975 TRA2AQ13595 282 aaKnown RBP eCLIP14.01□□□□□ -0.17
TPM1-228ENST00000560975 C17orf82Q86X59 251 aaPredicted RBP14.01□□□□□ -0.17
TPM1-228ENST00000560975 VN1R17PQ8TDU5 208 aa14.01□□□□□ -0.17
TPM1-228ENST00000560975 WDYHV1Q96HA8 205 aa14.01□□□□□ -0.17
TPM1-228ENST00000560975 SGCZQ96LD1 299 aa14.01□□□□□ -0.17
TPM1-228ENST00000560975 IMMP2LQ96T52 175 aa14.01□□□□□ -0.17
TPM1-228ENST00000560975 OR1A1Q9P1Q5 309 aa14.01□□□□□ -0.17
TPM1-228ENST00000560975 OR2W1Q9Y3N9 320 aa14.01□□□□□ -0.17
TPM1-228ENST00000560975 PPIAL4AQ9Y536 164 aa14.01□□□□□ -0.17
TPM1-228ENST00000560975 PRUNE2Q8WUY3 3088 aa14.01□□□□□ -0.17
TPM1-228ENST00000560975 C10orf142B7Z368 130 aa14.01□□□□□ -0.17
TPM1-228ENST00000560975 DUX1O43812 170 aa14.01□□□□□ -0.17
TPM1-228ENST00000560975 ACSF3Q4G176 576 aaPredicted RBP14.01□□□□□ -0.17
TPM1-228ENST00000560975 FFAR4Q5NUL3 377 aa14.01□□□□□ -0.17
TPM1-228ENST00000560975 FADS6Q8N9I5 356 aa14.01□□□□□ -0.17
TPM1-228ENST00000560975 CLDN23Q96B33 292 aa14.01□□□□□ -0.17
TPM1-228ENST00000560975 ZNF488Q96MN9 340 aa14.01□□□□□ -0.17
TPM1-228ENST00000560975 DERL1Q9BUN8 251 aa14.01□□□□□ -0.17
TPM1-228ENST00000560975 TMEM106BQ9NUM4 274 aa14.01□□□□□ -0.17
TPM1-228ENST00000560975 PXMP4Q9Y6I8 212 aa14.01□□□□□ -0.17
TPM1-228ENST00000560975 CTXND1A0A1B0GTU2 59 aa14.01□□□□□ -0.17
TPM1-228ENST00000560975 C11orf94C9JXX5 98 aa14.01□□□□□ -0.17
TPM1-228ENST00000560975 CELA2AP08217 269 aa14.01□□□□□ -0.17
TPM1-228ENST00000560975 VEGFBP49765 207 aa14.01□□□□□ -0.17
TPM1-228ENST00000560975 Q6ZS49 121 aa14.01□□□□□ -0.17
TPM1-228ENST00000560975 SRXN1Q9BYN0 137 aa14.01□□□□□ -0.17
TPM1-228ENST00000560975 GPR35Q9HC97 309 aa14.01□□□□□ -0.17
TPM1-228ENST00000560975 MSL2Q9HCI7 577 aa14.01□□□□□ -0.17
TPM1-228ENST00000560975 KCNS2Q9ULS6 477 aa14.01□□□□□ -0.17
TPM1-228ENST00000560975 SIAH2O43255 324 aa14□□□□□ -0.17
TPM1-228ENST00000560975 LINC00614P0C842 121 aa14□□□□□ -0.17
TPM1-228ENST00000560975 ZNF324BQ6AW86 544 aaPredicted RBP14□□□□□ -0.17
TPM1-228ENST00000560975 HSPB9Q9BQS6 159 aa14□□□□□ -0.17
TPM1-228ENST00000560975 WNT5BQ9H1J7 359 aa14□□□□□ -0.17
TPM1-228ENST00000560975 BRWD1Q9NSI6 2320 aa14□□□□□ -0.17
TPM1-228ENST00000560975 A0A0J9YW62 118 aa14□□□□□ -0.17
TPM1-228ENST00000560975 OR6C6A6NF89 314 aa14□□□□□ -0.17
TPM1-228ENST00000560975 LMO7DNF2Z398 122 aa14□□□□□ -0.17
TPM1-228ENST00000560975 CLDN15P56746 228 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms