RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 CITED1Q99966 193 aa9.65□□□□□ -0.86
USP8-212ENST00000560730 SLC25A33Q9BSK2 321 aa9.65□□□□□ -0.86
USP8-212ENST00000560730 FUNDC2Q9BWH2 189 aa9.65□□□□□ -0.86
USP8-212ENST00000560730 RANBP3Q9H6Z4 567 aaPredicted RBP9.65□□□□□ -0.86
USP8-212ENST00000560730 C12orf4Q9NQ89 552 aa9.65□□□□□ -0.86
USP8-212ENST00000560730 ABRACLQ9P1F3 81 aa9.65□□□□□ -0.86
USP8-212ENST00000560730 JPT1Q9UK76 154 aa9.65□□□□□ -0.86
USP8-212ENST00000560730 IGKV1-6A0A0C4DH72 117 aa9.65□□□□□ -0.87
USP8-212ENST00000560730 SH2D7A6NKC9 451 aaPredicted RBP9.65□□□□□ -0.87
USP8-212ENST00000560730 ZNF736B4DX44 427 aaPredicted RBP9.65□□□□□ -0.87
USP8-212ENST00000560730 CD3GP09693 182 aa9.65□□□□□ -0.87
USP8-212ENST00000560730 ZNF137PP52743 207 aa9.65□□□□□ -0.87
USP8-212ENST00000560730 HLA-DRB3P79483 266 aa9.65□□□□□ -0.87
USP8-212ENST00000560730 HNF4GQ14541 408 aa9.65□□□□□ -0.87
USP8-212ENST00000560730 TIMM50Q3ZCQ8 353 aa9.65□□□□□ -0.87
USP8-212ENST00000560730 CDNFQ49AH0 187 aa9.65□□□□□ -0.87
USP8-212ENST00000560730 LYG1Q8N1E2 194 aa9.65□□□□□ -0.87
USP8-212ENST00000560730 OR13F1Q8NGS4 319 aa9.65□□□□□ -0.87
USP8-212ENST00000560730 OR2T6Q8NHC8 308 aa9.65□□□□□ -0.87
USP8-212ENST00000560730 MAFIPQ8WZ33 124 aa9.65□□□□□ -0.87
USP8-212ENST00000560730 SLC25A38Q96DW6 304 aa9.65□□□□□ -0.87
USP8-212ENST00000560730 RBM14Q96PK6 669 aaKnown RBP9.65□□□□□ -0.87
USP8-212ENST00000560730 ABHD14AQ9BUJ0 271 aa9.65□□□□□ -0.87
USP8-212ENST00000560730 PRSS22Q9GZN4 317 aa9.65□□□□□ -0.87
USP8-212ENST00000560730 SERTAD4Q9NUC0 356 aa9.65□□□□□ -0.87
USP8-212ENST00000560730 OR1A1Q9P1Q5 309 aa9.65□□□□□ -0.87
USP8-212ENST00000560730 ZNF230Q9UIE0 474 aaPredicted RBP9.65□□□□□ -0.87
USP8-212ENST00000560730 OR2F2O95006 317 aa9.64□□□□□ -0.87
USP8-212ENST00000560730 IGKV1D-33P01593 117 aa9.64□□□□□ -0.87
USP8-212ENST00000560730 IGKV1-33P01594 117 aa9.64□□□□□ -0.87
USP8-212ENST00000560730 FCGR3AP08637 254 aa9.64□□□□□ -0.87
USP8-212ENST00000560730 FAM106CPP0CH98 169 aa9.64□□□□□ -0.87
USP8-212ENST00000560730 IL3RAP26951 378 aa9.64□□□□□ -0.87
USP8-212ENST00000560730 OR3A3P47888 321 aa9.64□□□□□ -0.87
USP8-212ENST00000560730 HES1Q14469 280 aa9.64□□□□□ -0.87
USP8-212ENST00000560730 HERPUD1Q15011 391 aa9.64□□□□□ -0.87
USP8-212ENST00000560730 TMEM95Q3KNT9 176 aa9.64□□□□□ -0.87
USP8-212ENST00000560730 LY6G6FQ5SQ64 297 aa9.64□□□□□ -0.87
USP8-212ENST00000560730 STEAP3Q658P3 488 aa9.64□□□□□ -0.87
USP8-212ENST00000560730 NAA50Q9GZZ1 169 aaKnown RBP9.64□□□□□ -0.87
USP8-212ENST00000560730 RHBDL2Q9NX52 303 aa9.64□□□□□ -0.87
USP8-212ENST00000560730 SLC23A1Q9UHI7 598 aa9.64□□□□□ -0.87
USP8-212ENST00000560730 TET2Q6N021 2002 aaPredicted RBP9.63□□□□□ -0.87
USP8-212ENST00000560730 SERPINE3A8MV23 424 aa9.63□□□□□ -0.87
USP8-212ENST00000560730 TRDCB7Z8K6 153 aa9.63□□□□□ -0.87
USP8-212ENST00000560730 ST8SIA5O15466 376 aa9.63□□□□□ -0.87
USP8-212ENST00000560730 RGS11O94810 467 aa9.63□□□□□ -0.87
USP8-212ENST00000560730 GSTT2P0CG29 244 aa9.63□□□□□ -0.87
USP8-212ENST00000560730 GSTT2BP0CG30 244 aa9.63□□□□□ -0.87
USP8-212ENST00000560730 TMEM11P17152 192 aa9.63□□□□□ -0.87
USP8-212ENST00000560730 CEACAM6P40199 344 aa9.63□□□□□ -0.87
USP8-212ENST00000560730 VBP1P61758 197 aa9.63□□□□□ -0.87
USP8-212ENST00000560730 NCS1P62166 190 aa9.63□□□□□ -0.87
USP8-212ENST00000560730 ABCA11PQ4W5N1 156 aa9.63□□□□□ -0.87
USP8-212ENST00000560730 C16orf82Q7Z2V1 217 aa9.63□□□□□ -0.87
USP8-212ENST00000560730 TGIF2LXQ8IUE1 241 aa9.63□□□□□ -0.87
USP8-212ENST00000560730 IZUMO1Q8IYV9 350 aa9.63□□□□□ -0.87
USP8-212ENST00000560730 KLHDC1Q8N7A1 406 aa9.63□□□□□ -0.87
USP8-212ENST00000560730 EAF1Q96JC9 268 aaPredicted RBP9.63□□□□□ -0.87
USP8-212ENST00000560730 IFI27L2Q9H2X8 130 aa9.63□□□□□ -0.87
USP8-212ENST00000560730 MGAT4AQ9UM21 535 aa9.63□□□□□ -0.87
USP8-212ENST00000560730 PLXNB1O43157 2135 aa9.62□□□□□ -0.87
USP8-212ENST00000560730 IGKV1D-8A0A087WSZ0 117 aa9.62□□□□□ -0.87
USP8-212ENST00000560730 TMEM235A6NFC5 223 aa9.62□□□□□ -0.87
USP8-212ENST00000560730 LANCL1O43813 399 aa9.62□□□□□ -0.87
USP8-212ENST00000560730 VSIG10L2P0DP72 767 aa9.62□□□□□ -0.87
USP8-212ENST00000560730 MRPS15P82914 257 aaKnown RBP9.62□□□□□ -0.87
USP8-212ENST00000560730 ARFRP1Q13795 201 aa9.62□□□□□ -0.87
USP8-212ENST00000560730 EBI3Q14213 229 aa9.62□□□□□ -0.87
USP8-212ENST00000560730 ZNF260Q3ZCT1 412 aa9.62□□□□□ -0.87
USP8-212ENST00000560730 IGSF11Q5DX21 431 aa9.62□□□□□ -0.87
USP8-212ENST00000560730 Q8N6K4 173 aa9.62□□□□□ -0.87
USP8-212ENST00000560730 OR2AK2Q8NG84 335 aa9.62□□□□□ -0.87
USP8-212ENST00000560730 SGMS2Q8NHU3 365 aa9.62□□□□□ -0.87
USP8-212ENST00000560730 AGMATQ9BSE5 352 aa9.62□□□□□ -0.87
USP8-212ENST00000560730 MRPL20Q9BYC9 149 aaKnown RBP9.62□□□□□ -0.87
USP8-212ENST00000560730 C11orf54Q9H0W9 315 aaPredicted RBP9.62□□□□□ -0.87
USP8-212ENST00000560730 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.62□□□□□ -0.87
USP8-212ENST00000560730 ETV7Q9Y603 341 aa9.62□□□□□ -0.87
USP8-212ENST00000560730 SAA2-SAA4A0A096LPE2 208 aa9.61□□□□□ -0.87
USP8-212ENST00000560730 FABP7O15540 132 aa9.61□□□□□ -0.87
USP8-212ENST00000560730 HSPA12AO43301 675 aa9.61□□□□□ -0.87
USP8-212ENST00000560730 SSX5O60225 188 aa9.61□□□□□ -0.87
USP8-212ENST00000560730 TFAP2AP05549 437 aa9.61□□□□□ -0.87
USP8-212ENST00000560730 LPLP06858 475 aa9.61□□□□□ -0.87
USP8-212ENST00000560730 SAA2P0DJI9 122 aaPredicted RBP9.61□□□□□ -0.87
USP8-212ENST00000560730 ZBTB25P24278 435 aa9.61□□□□□ -0.87
USP8-212ENST00000560730 CD1BP29016 333 aa9.61□□□□□ -0.87
USP8-212ENST00000560730 SCAND1P57086 179 aa9.61□□□□□ -0.87
USP8-212ENST00000560730 RPL39P5Q59GN2 51 aa9.61□□□□□ -0.87
USP8-212ENST00000560730 HACD4Q5VWC8 232 aa9.61□□□□□ -0.87
USP8-212ENST00000560730 C11orf88Q6PI97 169 aa9.61□□□□□ -0.87
USP8-212ENST00000560730 C11orf44Q8N8P7 122 aa9.61□□□□□ -0.87
USP8-212ENST00000560730 OR4A4PQ8NGN8 299 aa9.61□□□□□ -0.87
USP8-212ENST00000560730 NUDCD2Q8WVJ2 157 aa9.61□□□□□ -0.87
USP8-212ENST00000560730 ABHD14BQ96IU4 210 aa9.61□□□□□ -0.87
USP8-212ENST00000560730 AKR1E2Q96JD6 320 aa9.61□□□□□ -0.87
USP8-212ENST00000560730 ZNF251Q9BRH9 671 aa9.61□□□□□ -0.87
USP8-212ENST00000560730 MRPS26Q9BYN8 205 aaKnown RBP9.61□□□□□ -0.87
USP8-212ENST00000560730 WNT10AQ9GZT5 417 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms