RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 IL1F10Q8WWZ1 152 aa8.01□□□□□ -1.13
LDLR-214ENST00000560628 GALMQ96C23 342 aa8.01□□□□□ -1.13
LDLR-214ENST00000560628 KCTD7Q96MP8 289 aa8.01□□□□□ -1.13
LDLR-214ENST00000560628 NICN1Q9BSH3 213 aa8.01□□□□□ -1.13
LDLR-214ENST00000560628 MCRIP2Q9BUT9 160 aaKnown RBP8.01□□□□□ -1.13
LDLR-214ENST00000560628 TMEM59Q9BXS4 323 aa8.01□□□□□ -1.13
LDLR-214ENST00000560628 GPR61Q9BZJ8 451 aa8.01□□□□□ -1.13
LDLR-214ENST00000560628 CHMP1AQ9HD42 196 aaPredicted RBP8.01□□□□□ -1.13
LDLR-214ENST00000560628 SCN3BQ9NY72 215 aa8.01□□□□□ -1.13
LDLR-214ENST00000560628 ZNF107Q9UII5 783 aaPredicted RBP8.01□□□□□ -1.13
LDLR-214ENST00000560628 JPT1Q9UK76 154 aa8.01□□□□□ -1.13
LDLR-214ENST00000560628 LSM2Q9Y333 95 aaKnown RBP8.01□□□□□ -1.13
LDLR-214ENST00000560628 YPEL1O60688 119 aa8□□□□□ -1.13
LDLR-214ENST00000560628 RGS11O94810 467 aa8□□□□□ -1.13
LDLR-214ENST00000560628 IGHG4P01861 327 aa8□□□□□ -1.13
LDLR-214ENST00000560628 ELANEP08246 267 aa8□□□□□ -1.13
LDLR-214ENST00000560628 HSMCR30P0CW71 290 aa8□□□□□ -1.13
LDLR-214ENST00000560628 VDAC1P21796 283 aa8□□□□□ -1.13
LDLR-214ENST00000560628 SLC6A1P30531 599 aa8□□□□□ -1.13
LDLR-214ENST00000560628 CDX1P47902 265 aaPredicted RBP8□□□□□ -1.13
LDLR-214ENST00000560628 ACTBP60709 375 aa8□□□□□ -1.13
LDLR-214ENST00000560628 QRFPP83859 136 aa8□□□□□ -1.13
LDLR-214ENST00000560628 HTD2P86397 168 aa8□□□□□ -1.13
LDLR-214ENST00000560628 CFHR3Q02985 330 aa8□□□□□ -1.13
LDLR-214ENST00000560628 UNC119Q13432 240 aa8□□□□□ -1.13
LDLR-214ENST00000560628 KIR2DS1Q14954 304 aa8□□□□□ -1.13
LDLR-214ENST00000560628 P2RY14Q15391 338 aa8□□□□□ -1.13
LDLR-214ENST00000560628 LIPKQ5VXJ0 399 aa8□□□□□ -1.13
LDLR-214ENST00000560628 ZNF554Q86TJ5 538 aa8□□□□□ -1.13
LDLR-214ENST00000560628 KCNG3Q8TAE7 436 aa8□□□□□ -1.13
LDLR-214ENST00000560628 PHYHIPQ92561 330 aa8□□□□□ -1.13
LDLR-214ENST00000560628 YPEL2Q96QA6 119 aa8□□□□□ -1.13
LDLR-214ENST00000560628 NABP2Q9BQ15 211 aa8□□□□□ -1.13
LDLR-214ENST00000560628 ZNF251Q9BRH9 671 aa8□□□□□ -1.13
LDLR-214ENST00000560628 KLK15Q9H2R5 256 aa8□□□□□ -1.13
LDLR-214ENST00000560628 PLEKHJ1Q9NW61 149 aa8□□□□□ -1.13
LDLR-214ENST00000560628 ABRACLQ9P1F3 81 aa8□□□□□ -1.13
LDLR-214ENST00000560628 LRRC42Q9Y546 428 aa8□□□□□ -1.13
LDLR-214ENST00000560628 SAA2-SAA4A0A096LPE2 208 aa7.99□□□□□ -1.13
LDLR-214ENST00000560628 A0A0A6YYD4 124 aa7.99□□□□□ -1.13
LDLR-214ENST00000560628 TMEM14DPA8MWL7 114 aa7.99□□□□□ -1.13
LDLR-214ENST00000560628 G3V318 75 aa7.99□□□□□ -1.13
LDLR-214ENST00000560628 SLC22A1O15245 554 aa7.99□□□□□ -1.13
LDLR-214ENST00000560628 ST8SIA5O15466 376 aa7.99□□□□□ -1.13
LDLR-214ENST00000560628 SOCS1O15524 211 aa7.99□□□□□ -1.13
LDLR-214ENST00000560628 IGF1P05019 195 aa7.99□□□□□ -1.13
LDLR-214ENST00000560628 UCHL1P09936 223 aa7.99□□□□□ -1.13
LDLR-214ENST00000560628 SAA2P0DJI9 122 aaPredicted RBP7.99□□□□□ -1.13
LDLR-214ENST00000560628 LUMP51884 338 aaPredicted RBP7.99□□□□□ -1.13
LDLR-214ENST00000560628 AQP4P55087 323 aa7.99□□□□□ -1.13
LDLR-214ENST00000560628 RPS25P62851 125 aaKnown RBP7.99□□□□□ -1.13
LDLR-214ENST00000560628 IRF3Q14653 427 aa7.99□□□□□ -1.13
LDLR-214ENST00000560628 HMGN3Q15651 99 aa7.99□□□□□ -1.13
LDLR-214ENST00000560628 VAX1Q5SQQ9 334 aa7.99□□□□□ -1.13
LDLR-214ENST00000560628 C11orf87Q6NUJ2 197 aa7.99□□□□□ -1.13
LDLR-214ENST00000560628 TMEM91Q6ZNR0 172 aa7.99□□□□□ -1.13
LDLR-214ENST00000560628 ZNF833PQ6ZTB9 187 aa7.99□□□□□ -1.13
LDLR-214ENST00000560628 RNF152Q8N8N0 203 aa7.99□□□□□ -1.13
LDLR-214ENST00000560628 OR2AK2Q8NG84 335 aa7.99□□□□□ -1.13
LDLR-214ENST00000560628 NRG4Q8WWG1 115 aa7.99□□□□□ -1.13
LDLR-214ENST00000560628 UFD1Q92890 307 aa7.99□□□□□ -1.13
LDLR-214ENST00000560628 OR5B12Q96R08 314 aa7.99□□□□□ -1.13
LDLR-214ENST00000560628 GFI1Q99684 422 aa7.99□□□□□ -1.13
LDLR-214ENST00000560628 HDHD3Q9BSH5 251 aaPredicted RBP7.99□□□□□ -1.13
LDLR-214ENST00000560628 TM2D1Q9BX74 207 aa7.99□□□□□ -1.13
LDLR-214ENST00000560628 ANKRD60Q9BZ19 345 aa7.99□□□□□ -1.13
LDLR-214ENST00000560628 PARP12Q9H0J9 701 aaKnown RBP7.99□□□□□ -1.13
LDLR-214ENST00000560628 STEAP1Q9UHE8 339 aa7.99□□□□□ -1.13
LDLR-214ENST00000560628 AK6Q9Y3D8 172 aaKnown RBP7.99□□□□□ -1.13
LDLR-214ENST00000560628 ATP6V0E1O15342 81 aa7.98□□□□□ -1.13
LDLR-214ENST00000560628 NBR2O15453 112 aa7.98□□□□□ -1.13
LDLR-214ENST00000560628 BPNT1O95861 308 aa7.98□□□□□ -1.13
LDLR-214ENST00000560628 NAPSAO96009 420 aa7.98□□□□□ -1.13
LDLR-214ENST00000560628 CD37P11049 281 aa7.98□□□□□ -1.13
LDLR-214ENST00000560628 PSMB8P28062 276 aa7.98□□□□□ -1.13
LDLR-214ENST00000560628 DGCR2P98153 550 aa7.98□□□□□ -1.13
LDLR-214ENST00000560628 CD69Q07108 199 aa7.98□□□□□ -1.13
LDLR-214ENST00000560628 RPL39P5Q59GN2 51 aa7.98□□□□□ -1.13
LDLR-214ENST00000560628 LY6G6FQ5SQ64 297 aa7.98□□□□□ -1.13
LDLR-214ENST00000560628 LIN54Q6MZP7 749 aa7.98□□□□□ -1.13
LDLR-214ENST00000560628 ZNF880Q6PDB4 577 aa7.98□□□□□ -1.13
LDLR-214ENST00000560628 TMEM65Q6PI78 240 aa7.98□□□□□ -1.13
LDLR-214ENST00000560628 GLDNQ6ZMI3 551 aaPredicted RBP7.98□□□□□ -1.13
LDLR-214ENST00000560628 SVOPQ8N4V2 548 aa7.98□□□□□ -1.13
LDLR-214ENST00000560628 OR6M1Q8NGM8 313 aa7.98□□□□□ -1.13
LDLR-214ENST00000560628 OR5M8Q8NGP6 311 aa7.98□□□□□ -1.13
LDLR-214ENST00000560628 OR8U1Q8NH10 309 aa7.98□□□□□ -1.13
LDLR-214ENST00000560628 ABHD14BQ96IU4 210 aa7.98□□□□□ -1.13
LDLR-214ENST00000560628 CCDC90BQ9GZT6 254 aa7.98□□□□□ -1.13
LDLR-214ENST00000560628 LPAR5Q9H1C0 372 aa7.98□□□□□ -1.13
LDLR-214ENST00000560628 IFI27L2Q9H2X8 130 aa7.98□□□□□ -1.13
LDLR-214ENST00000560628 OR51J1Q9H342 316 aa7.98□□□□□ -1.13
LDLR-214ENST00000560628 PLGRKTQ9HBL7 147 aa7.98□□□□□ -1.13
LDLR-214ENST00000560628 PARP11Q9NR21 331 aa7.98□□□□□ -1.13
LDLR-214ENST00000560628 AK3Q9UIJ7 227 aa7.98□□□□□ -1.13
LDLR-214ENST00000560628 RNF150Q9ULK6 438 aa7.98□□□□□ -1.13
LDLR-214ENST00000560628 TPRKBQ9Y3C4 175 aa7.98□□□□□ -1.13
LDLR-214ENST00000560628 DNAH3Q8TD57 4116 aa7.98□□□□□ -1.13
LDLR-214ENST00000560628 IGHV7-81A0A0B4J1V7 117 aa7.97□□□□□ -1.13
LDLR-214ENST00000560628 TRAV41A0A0B4J266 112 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms