RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 RAB3CQ96E17 227 aa11.38□□□□□ -0.59
PKNOX1-209ENST00000560448 ZNF48Q96MX3 618 aaPredicted RBP11.38□□□□□ -0.59
PKNOX1-209ENST00000560448 C12orf4Q9NQ89 552 aa11.38□□□□□ -0.59
PKNOX1-209ENST00000560448 ZNRD1Q9P1U0 126 aa11.38□□□□□ -0.59
PKNOX1-209ENST00000560448 ZNF107Q9UII5 783 aaPredicted RBP11.38□□□□□ -0.59
PKNOX1-209ENST00000560448 ELF5Q9UKW6 265 aaPredicted RBP11.38□□□□□ -0.59
PKNOX1-209ENST00000560448 A0A0U1RQK1 487 aa11.37□□□□□ -0.59
PKNOX1-209ENST00000560448 F2RL2O00254 374 aa11.37□□□□□ -0.59
PKNOX1-209ENST00000560448 TOR1AO14656 332 aa11.37□□□□□ -0.59
PKNOX1-209ENST00000560448 NAPSAO96009 420 aa11.37□□□□□ -0.59
PKNOX1-209ENST00000560448 RNASE1P07998 156 aaKnown RBP11.37□□□□□ -0.59
PKNOX1-209ENST00000560448 COX7A1P24310 79 aa11.37□□□□□ -0.59
PKNOX1-209ENST00000560448 HTR1DP28221 377 aa11.37□□□□□ -0.59
PKNOX1-209ENST00000560448 CEACAM3P40198 252 aa11.37□□□□□ -0.59
PKNOX1-209ENST00000560448 VEGFCP49767 419 aa11.37□□□□□ -0.59
PKNOX1-209ENST00000560448 MRPS15P82914 257 aaKnown RBP11.37□□□□□ -0.59
PKNOX1-209ENST00000560448 CDNFQ49AH0 187 aa11.37□□□□□ -0.59
PKNOX1-209ENST00000560448 C6orf201Q7Z4U5 140 aa11.37□□□□□ -0.59
PKNOX1-209ENST00000560448 PDZD9Q8IXQ8 264 aa11.37□□□□□ -0.59
PKNOX1-209ENST00000560448 ZDHHC22Q8N966 263 aa11.37□□□□□ -0.59
PKNOX1-209ENST00000560448 TMEM229BQ8NBD8 167 aa11.37□□□□□ -0.59
PKNOX1-209ENST00000560448 DRAXINQ8NBI3 349 aaPredicted RBP11.37□□□□□ -0.59
PKNOX1-209ENST00000560448 OR6F1Q8NGZ6 308 aa11.37□□□□□ -0.59
PKNOX1-209ENST00000560448 SULT4A1Q9BR01 284 aa11.37□□□□□ -0.59
PKNOX1-209ENST00000560448 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.37□□□□□ -0.59
PKNOX1-209ENST00000560448 AMMECR1Q9Y4X0 333 aaPredicted RBP11.37□□□□□ -0.59
PKNOX1-209ENST00000560448 KIAA2026Q5HYC2 2103 aa11.37□□□□□ -0.59
PKNOX1-209ENST00000560448 UBE2QL1A1L167 161 aa11.36□□□□□ -0.59
PKNOX1-209ENST00000560448 C7orf66A4D0T2 115 aa11.36□□□□□ -0.59
PKNOX1-209ENST00000560448 TMEM235A6NFC5 223 aa11.36□□□□□ -0.59
PKNOX1-209ENST00000560448 DNAJC9-AS1A6NH13 148 aa11.36□□□□□ -0.59
PKNOX1-209ENST00000560448 OOSP1A8MZH6 123 aa11.36□□□□□ -0.59
PKNOX1-209ENST00000560448 C15orf65H3BRN8 121 aa11.36□□□□□ -0.59
PKNOX1-209ENST00000560448 SOCS1O15524 211 aa11.36□□□□□ -0.59
PKNOX1-209ENST00000560448 VENTXO95231 258 aa11.36□□□□□ -0.59
PKNOX1-209ENST00000560448 IGLV1-47P01700 117 aa11.36□□□□□ -0.59
PKNOX1-209ENST00000560448 SSTR5P35346 364 aa11.36□□□□□ -0.59
PKNOX1-209ENST00000560448 IER3P46695 156 aa11.36□□□□□ -0.59
PKNOX1-209ENST00000560448 TMEM50BP56557 158 aa11.36□□□□□ -0.59
PKNOX1-209ENST00000560448 PLAC9Q5JTB6 97 aa11.36□□□□□ -0.59
PKNOX1-209ENST00000560448 PRAMEF5Q5TYX0 476 aa11.36□□□□□ -0.59
PKNOX1-209ENST00000560448 CCDC144NLQ6NUI1 221 aa11.36□□□□□ -0.59
PKNOX1-209ENST00000560448 BRICD5Q6PL45 260 aa11.36□□□□□ -0.59
PKNOX1-209ENST00000560448 OR4C16Q8NGL9 310 aa11.36□□□□□ -0.59
PKNOX1-209ENST00000560448 MRPL30Q8TCC3 161 aaKnown RBP11.36□□□□□ -0.59
PKNOX1-209ENST00000560448 ARL11Q969Q4 196 aa11.36□□□□□ -0.59
PKNOX1-209ENST00000560448 ST6GAL2Q96JF0 529 aa11.36□□□□□ -0.59
PKNOX1-209ENST00000560448 FAAP24Q9BTP7 215 aa11.36□□□□□ -0.59
PKNOX1-209ENST00000560448 NUDT15Q9NV35 164 aa11.36□□□□□ -0.59
PKNOX1-209ENST00000560448 TRAV6A0A075B6T7 132 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 MEIS3P1A6NDR6 274 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 LEUTXA8MZ59 168 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 DIRAS3O95661 229 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 DHFRP00374 187 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 GSTP1P09211 210 aaKnown RBP11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 H2AFB2P0C5Z0 115 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 AKAIN1P0CW23 69 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 OMGP23515 440 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 DYNLT3P51808 116 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 ACTBP60709 375 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 UBA52P62987 128 aaKnown RBP11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 ACTG1P63261 375 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 HTD2P86397 168 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 SLC9A3R2Q15599 337 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 SRSF7Q16629 238 aaKnown RBP eCLIP11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 HLA-DRB5Q30154 266 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 LY6G6FQ5SQ64 297 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 ZNF880Q6PDB4 577 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 LIAT1Q6ZQX7 453 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 OR4K15Q8NH41 348 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 OR56B4Q8NH76 319 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 DYRK2Q92630 601 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 GALMQ96C23 342 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 ARHGAP5-AS1Q96IT6 56 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 CMSS1Q9BQ75 279 aaKnown RBP11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 PECRQ9BY49 303 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 CHMP1AQ9HD42 196 aaPredicted RBP11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 DPM3Q9P2X0 92 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 JPT1Q9UK76 154 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 ANAPC10Q9UM13 185 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 KCNK7Q9Y2U2 307 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 CUBNO60494 3623 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 MEX3AA1L020 520 aaKnown RBP11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 C12orf77C9JDV5 145 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 SDCBPO00560 298 aaPredicted RBP11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 MFNGO00587 321 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 HOXA3O43365 443 aaPredicted RBP11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 SSX5O60225 188 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 MMP23AO75900 390 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 CCNKO75909 580 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 RGS11O94810 467 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 CD74P04233 296 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 HIST1H1DP16402 221 aaKnown RBP11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 GNB3P16520 340 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 NFYBP25208 207 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 FAUP35544 74 aaKnown RBP11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 MECP2P51608 486 aaKnown RBP11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 DLX1P56177 255 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 RAB25P57735 213 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 TAS2R19P59542 299 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms