RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 PAX5Q02548 391 aa16.74■□□□□ 0.27
PSEN1-225ENST00000560005 TATDN3Q17R31 274 aa16.74■□□□□ 0.27
PSEN1-225ENST00000560005 SCGB2B2Q4G0G5 96 aa16.74■□□□□ 0.27
PSEN1-225ENST00000560005 SLC35E4Q6ICL7 350 aa16.74■□□□□ 0.27
PSEN1-225ENST00000560005 FAAP20Q6NZ36 180 aa16.74■□□□□ 0.27
PSEN1-225ENST00000560005 LDLRAD3Q86YD5 345 aa16.74■□□□□ 0.27
PSEN1-225ENST00000560005 GAPTQ8N292 157 aa16.74■□□□□ 0.27
PSEN1-225ENST00000560005 BOLLQ8N9W6 283 aaKnown RBP16.74■□□□□ 0.27
PSEN1-225ENST00000560005 OR6F1Q8NGZ6 308 aa16.74■□□□□ 0.27
PSEN1-225ENST00000560005 MRAPQ8TCY5 172 aa16.74■□□□□ 0.27
PSEN1-225ENST00000560005 CHAC2Q8WUX2 184 aa16.74■□□□□ 0.27
PSEN1-225ENST00000560005 SNX22Q96L94 193 aa16.74■□□□□ 0.27
PSEN1-225ENST00000560005 HDHD3Q9BSH5 251 aaPredicted RBP16.74■□□□□ 0.27
PSEN1-225ENST00000560005 DNTTIP1Q9H147 329 aa16.74■□□□□ 0.27
PSEN1-225ENST00000560005 GPN1Q9HCN4 374 aaPredicted RBP16.74■□□□□ 0.27
PSEN1-225ENST00000560005 EHFQ9NZC4 300 aa16.74■□□□□ 0.27
PSEN1-225ENST00000560005 TRAV38-1A0A0B4J264 116 aa16.73■□□□□ 0.27
PSEN1-225ENST00000560005 TMEM30CPA0ZSE6 113 aa16.73■□□□□ 0.27
PSEN1-225ENST00000560005 TRDCB7Z8K6 153 aa16.73■□□□□ 0.27
PSEN1-225ENST00000560005 OPN1MWP04001 364 aa16.73■□□□□ 0.27
PSEN1-225ENST00000560005 IL5P05113 134 aa16.73■□□□□ 0.27
PSEN1-225ENST00000560005 CSN2P05814 226 aa16.73■□□□□ 0.27
PSEN1-225ENST00000560005 OPN1MW2P0DN77 364 aa16.73■□□□□ 0.27
PSEN1-225ENST00000560005 OPN1MW3P0DN78 364 aa16.73■□□□□ 0.27
PSEN1-225ENST00000560005 GLP1RP43220 463 aa16.73■□□□□ 0.27
PSEN1-225ENST00000560005 KCNJ8Q15842 424 aa16.73■□□□□ 0.27
PSEN1-225ENST00000560005 TEX36Q5VZQ5 186 aa16.73■□□□□ 0.27
PSEN1-225ENST00000560005 DHRS7BQ6IAN0 325 aaPredicted RBP16.73■□□□□ 0.27
PSEN1-225ENST00000560005 ZNF880Q6PDB4 577 aa16.73■□□□□ 0.27
PSEN1-225ENST00000560005 ZNF497Q6ZNH5 498 aa16.73■□□□□ 0.27
PSEN1-225ENST00000560005 ZNF561Q8N587 486 aa16.73■□□□□ 0.27
PSEN1-225ENST00000560005 LHX4Q969G2 390 aa16.73■□□□□ 0.27
PSEN1-225ENST00000560005 ALX4Q9H161 411 aaPredicted RBP16.73■□□□□ 0.27
PSEN1-225ENST00000560005 NCOR1P1Q9H4R4 102 aa16.73■□□□□ 0.27
PSEN1-225ENST00000560005 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.72■□□□□ 0.27
PSEN1-225ENST00000560005 LGALS8O00214 317 aa16.72■□□□□ 0.27
PSEN1-225ENST00000560005 HSPB6O14558 160 aa16.72■□□□□ 0.27
PSEN1-225ENST00000560005 DIRAS3O95661 229 aa16.72■□□□□ 0.27
PSEN1-225ENST00000560005 TRAPPC2P0DI81 140 aa16.72■□□□□ 0.27
PSEN1-225ENST00000560005 TRAPPC2BP0DI82 140 aa16.72■□□□□ 0.27
PSEN1-225ENST00000560005 COL10A1Q03692 680 aa16.72■□□□□ 0.27
PSEN1-225ENST00000560005 SURF2Q15527 256 aaPredicted RBP16.72■□□□□ 0.27
PSEN1-225ENST00000560005 METTL11BQ5VVY1 283 aa16.72■□□□□ 0.27
PSEN1-225ENST00000560005 CD276Q5ZPR3 534 aa16.72■□□□□ 0.27
PSEN1-225ENST00000560005 TRAT1Q6PIZ9 186 aa16.72■□□□□ 0.27
PSEN1-225ENST00000560005 ZNF554Q86TJ5 538 aa16.72■□□□□ 0.27
PSEN1-225ENST00000560005 CADM3Q8N126 398 aa16.72■□□□□ 0.27
PSEN1-225ENST00000560005 MRPL30Q8TCC3 161 aaKnown RBP16.72■□□□□ 0.27
PSEN1-225ENST00000560005 KCNIP1Q9NZI2 227 aa16.72■□□□□ 0.27
PSEN1-225ENST00000560005 OOEPA6NGQ2 149 aa16.71■□□□□ 0.27
PSEN1-225ENST00000560005 MGST3O14880 152 aa16.71■□□□□ 0.27
PSEN1-225ENST00000560005 ARPC1BO15143 372 aaKnown RBP16.71■□□□□ 0.27
PSEN1-225ENST00000560005 NDUFA2O43678 99 aa16.71■□□□□ 0.27
PSEN1-225ENST00000560005 RLN1P04808 185 aa16.71■□□□□ 0.27
PSEN1-225ENST00000560005 LIPFP07098 398 aa16.71■□□□□ 0.27
PSEN1-225ENST00000560005 OR5H8P0DN80 308 aa16.71■□□□□ 0.27
PSEN1-225ENST00000560005 GABRA2P47869 451 aa16.71■□□□□ 0.27
PSEN1-225ENST00000560005 NPY4RP50391 375 aa16.71■□□□□ 0.27
PSEN1-225ENST00000560005 KIAA2026Q5HYC2 2103 aa16.71■□□□□ 0.27
PSEN1-225ENST00000560005 DHRS11Q6UWP2 260 aa16.71■□□□□ 0.27
PSEN1-225ENST00000560005 PDZD9Q8IXQ8 264 aa16.71■□□□□ 0.27
PSEN1-225ENST00000560005 OR4A4PQ8NGN8 299 aa16.71■□□□□ 0.27
PSEN1-225ENST00000560005 ANGPTL6Q8NI99 470 aa16.71■□□□□ 0.27
PSEN1-225ENST00000560005 FAM234AQ9H0X4 552 aa16.71■□□□□ 0.27
PSEN1-225ENST00000560005 CTSZQ9UBR2 303 aa16.71■□□□□ 0.27
PSEN1-225ENST00000560005 TRAPPC2LQ9UL33 140 aa16.71■□□□□ 0.27
PSEN1-225ENST00000560005 IGKV1D-17A0A075B6S4 117 aa16.7■□□□□ 0.26
PSEN1-225ENST00000560005 TMEM82A0PJX8 343 aa16.7■□□□□ 0.26
PSEN1-225ENST00000560005 C7orf66A4D0T2 115 aa16.7■□□□□ 0.26
PSEN1-225ENST00000560005 FABP7O15540 132 aa16.7■□□□□ 0.26
PSEN1-225ENST00000560005 TSPAN9O75954 239 aa16.7■□□□□ 0.26
PSEN1-225ENST00000560005 TK1P04183 234 aa16.7■□□□□ 0.26
PSEN1-225ENST00000560005 LOXL3P58215 753 aa16.7■□□□□ 0.26
PSEN1-225ENST00000560005 TAS2R31P59538 309 aa16.7■□□□□ 0.26
PSEN1-225ENST00000560005 HOXA4Q00056 320 aaPredicted RBP16.7■□□□□ 0.26
PSEN1-225ENST00000560005 ATPAF1Q5TC12 328 aaPredicted RBP16.7■□□□□ 0.26
PSEN1-225ENST00000560005 CD177Q8N6Q3 437 aa16.7■□□□□ 0.26
PSEN1-225ENST00000560005 ASCC1Q8N9N2 400 aaKnown RBP16.7■□□□□ 0.26
PSEN1-225ENST00000560005 GIMAP1Q8WWP7 306 aa16.7■□□□□ 0.26
PSEN1-225ENST00000560005 MAFIPQ8WZ33 124 aa16.7■□□□□ 0.26
PSEN1-225ENST00000560005 SDSLQ96GA7 329 aa16.7■□□□□ 0.26
PSEN1-225ENST00000560005 SIRPDQ9H106 197 aa16.7■□□□□ 0.26
PSEN1-225ENST00000560005 RAB9BQ9NP90 201 aa16.7■□□□□ 0.26
PSEN1-225ENST00000560005 HMX3A6NHT5 357 aa16.69■□□□□ 0.26
PSEN1-225ENST00000560005 NKX6-3A6NJ46 265 aa16.69■□□□□ 0.26
PSEN1-225ENST00000560005 SNRPGP15A8MWD9 76 aa16.69■□□□□ 0.26
PSEN1-225ENST00000560005 RAB25P57735 213 aa16.69■□□□□ 0.26
PSEN1-225ENST00000560005 UBE2MP61081 183 aaKnown RBP16.69■□□□□ 0.26
PSEN1-225ENST00000560005 C6orf183Q5T699 404 aa16.69■□□□□ 0.26
PSEN1-225ENST00000560005 STUMQ69YW2 141 aa16.69■□□□□ 0.26
PSEN1-225ENST00000560005 LHFPL1Q86WI0 220 aa16.69■□□□□ 0.26
PSEN1-225ENST00000560005 PIP4P2Q8N4L2 257 aa16.69■□□□□ 0.26
PSEN1-225ENST00000560005 ZFAND1Q8TCF1 268 aa16.69■□□□□ 0.26
PSEN1-225ENST00000560005 MBNL3Q9NUK0 354 aaKnown RBP16.69■□□□□ 0.26
PSEN1-225ENST00000560005 ZNF222Q9UK12 451 aa16.69■□□□□ 0.26
PSEN1-225ENST00000560005 ALG5Q9Y673 324 aa16.69■□□□□ 0.26
PSEN1-225ENST00000560005 TENM3Q9P273 2699 aa16.69■□□□□ 0.26
PSEN1-225ENST00000560005 K7N7A8 449 aa16.68■□□□□ 0.26
PSEN1-225ENST00000560005 PSPNO60542 156 aa16.68■□□□□ 0.26
PSEN1-225ENST00000560005 GSTT2P0CG29 244 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms