RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 TCTEX1D4Q5JR98 221 aa8.68□□□□□ -1.02
SPG11-216ENST00000559347 LY6G6FQ5SQ64 297 aa8.68□□□□□ -1.02
SPG11-216ENST00000559347 STEAP3Q658P3 488 aa8.68□□□□□ -1.02
SPG11-216ENST00000559347 C10orf99Q6UWK7 81 aa8.68□□□□□ -1.02
SPG11-216ENST00000559347 ODF3L1Q8IXM7 274 aa8.68□□□□□ -1.02
SPG11-216ENST00000559347 OR5AU1Q8NGC0 362 aa8.68□□□□□ -1.02
SPG11-216ENST00000559347 FCGR1BQ92637 280 aa8.68□□□□□ -1.02
SPG11-216ENST00000559347 GALMQ96C23 342 aa8.68□□□□□ -1.02
SPG11-216ENST00000559347 YPEL2Q96QA6 119 aa8.68□□□□□ -1.02
SPG11-216ENST00000559347 HDHD3Q9BSH5 251 aaPredicted RBP8.68□□□□□ -1.02
SPG11-216ENST00000559347 PECRQ9BY49 303 aa8.68□□□□□ -1.02
SPG11-216ENST00000559347 CHMP1AQ9HD42 196 aaPredicted RBP8.68□□□□□ -1.02
SPG11-216ENST00000559347 C12orf4Q9NQ89 552 aa8.68□□□□□ -1.02
SPG11-216ENST00000559347 AK3Q9UIJ7 227 aa8.68□□□□□ -1.02
SPG11-216ENST00000559347 TGP01266 2768 aa8.67□□□□□ -1.02
SPG11-216ENST00000559347 SAA2-SAA4A0A096LPE2 208 aa8.67□□□□□ -1.02
SPG11-216ENST00000559347 IFITM5A6NNB3 132 aa8.67□□□□□ -1.02
SPG11-216ENST00000559347 ZNF736B4DX44 427 aaPredicted RBP8.67□□□□□ -1.02
SPG11-216ENST00000559347 PDCD5O14737 125 aa8.67□□□□□ -1.02
SPG11-216ENST00000559347 LANCL1O43813 399 aa8.67□□□□□ -1.02
SPG11-216ENST00000559347 RGS11O94810 467 aa8.67□□□□□ -1.02
SPG11-216ENST00000559347 SAA2P0DJI9 122 aaPredicted RBP8.67□□□□□ -1.02
SPG11-216ENST00000559347 RAB3BP20337 219 aa8.67□□□□□ -1.02
SPG11-216ENST00000559347 RANBP1P43487 201 aa8.67□□□□□ -1.02
SPG11-216ENST00000559347 TMEM50BP56557 158 aa8.67□□□□□ -1.02
SPG11-216ENST00000559347 DEFA6Q01524 100 aa8.67□□□□□ -1.02
SPG11-216ENST00000559347 LSAMPQ13449 338 aa8.67□□□□□ -1.02
SPG11-216ENST00000559347 C2orf76Q3KRA6 126 aa8.67□□□□□ -1.02
SPG11-216ENST00000559347 PLAC9Q5JTB6 97 aa8.67□□□□□ -1.02
SPG11-216ENST00000559347 C22orf42Q6IC83 251 aa8.67□□□□□ -1.02
SPG11-216ENST00000559347 ZNF773Q6PK81 442 aa8.67□□□□□ -1.02
SPG11-216ENST00000559347 CENPVQ7Z7K6 275 aaPredicted RBP8.67□□□□□ -1.02
SPG11-216ENST00000559347 NR2C2APQ86WQ0 139 aa8.67□□□□□ -1.02
SPG11-216ENST00000559347 OR4X2Q8NGF9 303 aa8.67□□□□□ -1.02
SPG11-216ENST00000559347 OR56B1Q8NGI3 324 aa8.67□□□□□ -1.02
SPG11-216ENST00000559347 OR2T10Q8NGZ9 312 aa8.67□□□□□ -1.02
SPG11-216ENST00000559347 SETD6Q8TBK2 473 aa8.67□□□□□ -1.02
SPG11-216ENST00000559347 IL1F10Q8WWZ1 152 aa8.67□□□□□ -1.02
SPG11-216ENST00000559347 ARHGAP5-AS1Q96IT6 56 aa8.67□□□□□ -1.02
SPG11-216ENST00000559347 YTHDF1Q9BYJ9 559 aaKnown RBP8.67□□□□□ -1.02
SPG11-216ENST00000559347 IFI27L2Q9H2X8 130 aa8.67□□□□□ -1.02
SPG11-216ENST00000559347 RIMS4Q9H426 269 aaPredicted RBP8.67□□□□□ -1.02
SPG11-216ENST00000559347 LIN7CQ9NUP9 197 aaKnown RBP8.67□□□□□ -1.02
SPG11-216ENST00000559347 ABRACLQ9P1F3 81 aa8.67□□□□□ -1.02
SPG11-216ENST00000559347 RRP15Q9Y3B9 282 aaKnown RBP8.67□□□□□ -1.02
SPG11-216ENST00000559347 MOSP00540 346 aa8.66□□□□□ -1.02
SPG11-216ENST00000559347 IGHG2P01859 326 aa8.66□□□□□ -1.02
SPG11-216ENST00000559347 FGF9P31371 208 aaPredicted RBP8.66□□□□□ -1.02
SPG11-216ENST00000559347 ZNF833PQ6ZTB9 187 aa8.66□□□□□ -1.02
SPG11-216ENST00000559347 SLC35E3Q7Z769 313 aa8.66□□□□□ -1.02
SPG11-216ENST00000559347 FAM71E2Q8N5Q1 922 aa8.66□□□□□ -1.02
SPG11-216ENST00000559347 Q8N9W7 124 aa8.66□□□□□ -1.02
SPG11-216ENST00000559347 OR2AK2Q8NG84 335 aa8.66□□□□□ -1.02
SPG11-216ENST00000559347 OR4F17Q8NGA8 305 aa8.66□□□□□ -1.02
SPG11-216ENST00000559347 R3HDM4Q96D70 268 aa8.66□□□□□ -1.02
SPG11-216ENST00000559347 RBMXL1Q96E39 390 aaKnown RBP8.66□□□□□ -1.02
SPG11-216ENST00000559347 OR4F4Q96R69 305 aa8.66□□□□□ -1.02
SPG11-216ENST00000559347 MRPL20Q9BYC9 149 aaKnown RBP8.66□□□□□ -1.02
SPG11-216ENST00000559347 PLSCR3Q9NRY6 295 aa8.66□□□□□ -1.02
SPG11-216ENST00000559347 TXNL4BQ9NX01 149 aaKnown RBP8.66□□□□□ -1.02
SPG11-216ENST00000559347 MGAT4AQ9UM21 535 aa8.66□□□□□ -1.02
SPG11-216ENST00000559347 STUB1Q9UNE7 303 aa8.66□□□□□ -1.02
SPG11-216ENST00000559347 LRRC42Q9Y546 428 aa8.66□□□□□ -1.02
SPG11-216ENST00000559347 A0A0B4J203 849 aa8.65□□□□□ -1.02
SPG11-216ENST00000559347 A0A1W2PRX2 142 aa8.65□□□□□ -1.02
SPG11-216ENST00000559347 SMIM30A4D0T7 59 aa8.65□□□□□ -1.02
SPG11-216ENST00000559347 PSMB11A5LHX3 300 aa8.65□□□□□ -1.02
SPG11-216ENST00000559347 NCBP2LA6PVI3 153 aaKnown RBP8.65□□□□□ -1.02
SPG11-216ENST00000559347 ST8SIA5O15466 376 aa8.65□□□□□ -1.02
SPG11-216ENST00000559347 OR3A3P47888 321 aa8.65□□□□□ -1.02
SPG11-216ENST00000559347 MOGAT2Q3SYC2 334 aa8.65□□□□□ -1.02
SPG11-216ENST00000559347 KCTD21Q4G0X4 260 aa8.65□□□□□ -1.02
SPG11-216ENST00000559347 FAM71F2Q6NXP2 309 aa8.65□□□□□ -1.02
SPG11-216ENST00000559347 C1QL4Q86Z23 238 aa8.65□□□□□ -1.02
SPG11-216ENST00000559347 OR8H1Q8NGG4 311 aa8.65□□□□□ -1.02
SPG11-216ENST00000559347 CHPT1Q8WUD6 406 aa8.65□□□□□ -1.02
SPG11-216ENST00000559347 NOL4LQ96MY1 436 aaPredicted RBP8.65□□□□□ -1.02
SPG11-216ENST00000559347 S1PR3Q99500 378 aa8.65□□□□□ -1.02
SPG11-216ENST00000559347 NABP2Q9BQ15 211 aa8.65□□□□□ -1.02
SPG11-216ENST00000559347 CMSS1Q9BQ75 279 aaKnown RBP8.65□□□□□ -1.02
SPG11-216ENST00000559347 PARP12Q9H0J9 701 aaKnown RBP8.65□□□□□ -1.02
SPG11-216ENST00000559347 ABCG5Q9H222 651 aa8.65□□□□□ -1.02
SPG11-216ENST00000559347 Q9N2K0 584 aa8.65□□□□□ -1.02
SPG11-216ENST00000559347 OR1A1Q9P1Q5 309 aa8.65□□□□□ -1.02
SPG11-216ENST00000559347 SLC23A1Q9UHI7 598 aa8.65□□□□□ -1.02
SPG11-216ENST00000559347 RAB22AQ9UL26 194 aa8.65□□□□□ -1.02
SPG11-216ENST00000559347 KCNK7Q9Y2U2 307 aa8.65□□□□□ -1.02
SPG11-216ENST00000559347 TSSC4Q9Y5U2 329 aaPredicted RBP8.65□□□□□ -1.02
SPG11-216ENST00000559347 TCRBV4S1A1TA0A5B7 111 aa8.64□□□□□ -1.03
SPG11-216ENST00000559347 SERPINE3A8MV23 424 aa8.64□□□□□ -1.03
SPG11-216ENST00000559347 G3V4G9 280 aa8.64□□□□□ -1.03
SPG11-216ENST00000559347 MFNGO00587 321 aa8.64□□□□□ -1.03
SPG11-216ENST00000559347 ITGB1BP1O14713 200 aa8.64□□□□□ -1.03
SPG11-216ENST00000559347 SLC2A2P11168 524 aaPredicted RBP8.64□□□□□ -1.03
SPG11-216ENST00000559347 RAB6AP20340 208 aa8.64□□□□□ -1.03
SPG11-216ENST00000559347 GPR12P47775 334 aa8.64□□□□□ -1.03
SPG11-216ENST00000559347 F2RL1P55085 397 aa8.64□□□□□ -1.03
SPG11-216ENST00000559347 PDLIM3Q53GG5 364 aaPredicted RBP8.64□□□□□ -1.03
SPG11-216ENST00000559347 KHDC1LQ5JSQ8 128 aa8.64□□□□□ -1.03
SPG11-216ENST00000559347 SAMD5Q5TGI4 173 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms