RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 SELENOHQ8IZQ5 122 aaKnown RBP6.17□□□□□ -1.42
USP3-210ENST00000559192 OR1P1Q8NH06 330 aa6.17□□□□□ -1.42
USP3-210ENST00000559192 OR2V1Q8NHB1 315 aa6.17□□□□□ -1.42
USP3-210ENST00000559192 SCARF2Q96GP6 870 aaPredicted RBP6.17□□□□□ -1.42
USP3-210ENST00000559192 ZNF488Q96MN9 340 aa6.17□□□□□ -1.42
USP3-210ENST00000559192 WFDC1Q9HC57 220 aa6.17□□□□□ -1.42
USP3-210ENST00000559192 WNT16Q9UBV4 365 aa6.17□□□□□ -1.42
USP3-210ENST00000559192 SPINT2O43291 252 aa6.17□□□□□ -1.42
USP3-210ENST00000559192 GNG7O60262 68 aa6.17□□□□□ -1.42
USP3-210ENST00000559192 COX7A2P2O60397 106 aa6.17□□□□□ -1.42
USP3-210ENST00000559192 MELTFP08582 738 aa6.17□□□□□ -1.42
USP3-210ENST00000559192 VDAC1P21796 283 aa6.17□□□□□ -1.42
USP3-210ENST00000559192 MDH2P40926 338 aaKnown RBP6.17□□□□□ -1.42
USP3-210ENST00000559192 GUSBP11Q6P575 273 aa6.17□□□□□ -1.42
USP3-210ENST00000559192 RNF144BQ7Z419 303 aa6.17□□□□□ -1.42
USP3-210ENST00000559192 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.17□□□□□ -1.42
USP3-210ENST00000559192 NIT1Q86X76 327 aa6.17□□□□□ -1.42
USP3-210ENST00000559192 OR8A1Q8NGG7 326 aa6.17□□□□□ -1.42
USP3-210ENST00000559192 KCNE4Q8WWG9 221 aa6.17□□□□□ -1.42
USP3-210ENST00000559192 RASL10BQ96S79 203 aa6.17□□□□□ -1.42
USP3-210ENST00000559192 TMEM222Q9H0R3 208 aa6.17□□□□□ -1.42
USP3-210ENST00000559192 RIMS4Q9H426 269 aaPredicted RBP6.17□□□□□ -1.42
USP3-210ENST00000559192 SNURFLB1AK76 121 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 PDE6DO43924 150 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 GLIPR1P48060 266 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 CXCL12P48061 93 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 RBM11P57052 281 aaKnown RBP6.16□□□□□ -1.42
USP3-210ENST00000559192 FAM3BP58499 235 aaPredicted RBP6.16□□□□□ -1.42
USP3-210ENST00000559192 IGLV3-21P80748 117 aaPredicted RBP6.16□□□□□ -1.42
USP3-210ENST00000559192 HIKESHIQ53FT3 197 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 ZNF784Q8NCA9 323 aaPredicted RBP6.16□□□□□ -1.42
USP3-210ENST00000559192 RNF2Q99496 336 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 TECRQ9NZ01 308 aaKnown RBP6.16□□□□□ -1.42
USP3-210ENST00000559192 RPL36A-HNRNPH2H7BZ11 118 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 LINC01387J3KSC0 135 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 SMIM17P0DL12 118 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 HIST1H1EP10412 219 aaKnown RBP6.16□□□□□ -1.42
USP3-210ENST00000559192 NDUFB7P17568 137 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 ASPHD2Q6ICH7 369 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 SLC35E3Q7Z769 313 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 MRPL30Q8TCC3 161 aaKnown RBP6.16□□□□□ -1.42
USP3-210ENST00000559192 BOD1Q96IK1 185 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 TMEM140Q9NV12 185 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 PMS2P1A4D2B8 440 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 IER3P46695 156 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 HERVK_113P61574 105 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 OR1C1Q15619 314 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 MRPL54Q6P161 138 aaKnown RBP6.16□□□□□ -1.42
USP3-210ENST00000559192 SLC25A47Q6Q0C1 308 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 SSX8Q7RTT4 187 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 MRGPRGQ86SM5 289 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 DERL1Q9BUN8 251 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 FSCN3Q9NQT6 498 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 TRPM7Q96QT4 1865 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 SCN5AQ14524 2016 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 IGHV1OR15-9A0A0B4J2B8 117 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 A6NCN8 305 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 ZNF729A6NN14 1252 aaPredicted RBP6.16□□□□□ -1.42
USP3-210ENST00000559192 IGHV3-13P01766 116 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 IGHV3-7P01780 117 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 HOXA5P20719 270 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 BRS3P32247 399 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 CTAG1AP78358 180 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 ALKBH6Q3KRA9 238 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 GFI1BQ5VTD9 330 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 TMEM211Q6ICI0 200 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 ZNF818PQ6ZRF7 136 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 OR10D3Q8NH80 312 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 GALMQ96C23 342 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 ZFP30Q9Y2G7 519 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 FNDC1Q4ZHG4 1894 aaPredicted RBP6.16□□□□□ -1.42
USP3-210ENST00000559192 ARID1AO14497 2285 aa6.16□□□□□ -1.42
USP3-210ENST00000559192 SHISA7A6NL88 538 aa6.15□□□□□ -1.42
USP3-210ENST00000559192 ARR3P36575 388 aa6.15□□□□□ -1.42
USP3-210ENST00000559192 OR8B8Q15620 311 aa6.15□□□□□ -1.42
USP3-210ENST00000559192 H1FOOQ8IZA3 346 aaPredicted RBP6.15□□□□□ -1.42
USP3-210ENST00000559192 MOB3AQ96BX8 217 aa6.15□□□□□ -1.42
USP3-210ENST00000559192 NUDT11Q96G61 164 aa6.15□□□□□ -1.42
USP3-210ENST00000559192 Q96M66 194 aa6.15□□□□□ -1.42
USP3-210ENST00000559192 OR2H1Q9GZK4 316 aa6.15□□□□□ -1.42
USP3-210ENST00000559192 DUSP15Q9H1R2 295 aaPredicted RBP6.15□□□□□ -1.42
USP3-210ENST00000559192 CLN8Q9UBY8 286 aa6.15□□□□□ -1.42
USP3-210ENST00000559192 TIMM9Q9Y5J7 89 aa6.15□□□□□ -1.42
USP3-210ENST00000559192 RFNGQ9Y644 331 aa6.15□□□□□ -1.42
USP3-210ENST00000559192 CD5P06127 495 aa6.15□□□□□ -1.42
USP3-210ENST00000559192 CELA2AP08217 269 aa6.15□□□□□ -1.42
USP3-210ENST00000559192 CCL3P10147 92 aa6.15□□□□□ -1.42
USP3-210ENST00000559192 FOLR2P14207 255 aa6.15□□□□□ -1.42
USP3-210ENST00000559192 DLX1P56177 255 aa6.15□□□□□ -1.42
USP3-210ENST00000559192 DCAF12Q5T6F0 453 aa6.15□□□□□ -1.42
USP3-210ENST00000559192 NUFIP2Q7Z417 695 aaKnown RBP6.15□□□□□ -1.42
USP3-210ENST00000559192 APOBEC3DQ96AK3 386 aaPredicted RBP6.15□□□□□ -1.42
USP3-210ENST00000559192 TAAR6Q96RI8 345 aa6.15□□□□□ -1.42
USP3-210ENST00000559192 CITED2Q99967 270 aaPredicted RBP6.15□□□□□ -1.42
USP3-210ENST00000559192 DEFB127Q9H1M4 99 aa6.15□□□□□ -1.42
USP3-210ENST00000559192 MANBALQ9NQG1 85 aa6.15□□□□□ -1.42
USP3-210ENST00000559192 CLDN16Q9Y5I7 305 aa6.15□□□□□ -1.42
USP3-210ENST00000559192 COL4A6Q14031 1691 aa6.15□□□□□ -1.42
USP3-210ENST00000559192 SLC17A3O00476 420 aa6.15□□□□□ -1.42
USP3-210ENST00000559192 CCL20P78556 96 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms