RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 XRCC3O43542 346 aa9.17□□□□□ -0.94
SNX1-204ENST00000559061 HLA-DQB1P01920 261 aa9.17□□□□□ -0.94
SNX1-204ENST00000559061 ZNF182P17025 639 aaPredicted RBP9.17□□□□□ -0.94
SNX1-204ENST00000559061 DTYMKP23919 212 aa9.17□□□□□ -0.94
SNX1-204ENST00000559061 REG1BP48304 166 aa9.17□□□□□ -0.94
SNX1-204ENST00000559061 TAS2R20P59543 309 aa9.17□□□□□ -0.94
SNX1-204ENST00000559061 MADCAM1Q13477 382 aa9.17□□□□□ -0.94
SNX1-204ENST00000559061 HABP2Q14520 560 aaPredicted RBP9.17□□□□□ -0.94
SNX1-204ENST00000559061 LY6EQ16553 131 aa9.17□□□□□ -0.94
SNX1-204ENST00000559061 SRSF7Q16629 238 aaKnown RBP eCLIP9.17□□□□□ -0.94
SNX1-204ENST00000559061 PNLIPRP3Q17RR3 467 aa9.17□□□□□ -0.94
SNX1-204ENST00000559061 C16orf87Q6PH81 154 aa9.17□□□□□ -0.94
SNX1-204ENST00000559061 TMEM219Q86XT9 240 aa9.17□□□□□ -0.94
SNX1-204ENST00000559061 GVQW1Q8N7I0 195 aa9.17□□□□□ -0.94
SNX1-204ENST00000559061 IL1F10Q8WWZ1 152 aa9.17□□□□□ -0.94
SNX1-204ENST00000559061 SNAPC3Q92966 411 aa9.17□□□□□ -0.94
SNX1-204ENST00000559061 GALMQ96C23 342 aa9.17□□□□□ -0.94
SNX1-204ENST00000559061 OCSTAMPQ9BR26 566 aa9.17□□□□□ -0.94
SNX1-204ENST00000559061 KCNIP1Q9NZI2 227 aa9.17□□□□□ -0.94
SNX1-204ENST00000559061 CCDC59Q9P031 241 aaKnown RBP9.17□□□□□ -0.94
SNX1-204ENST00000559061 GNG12Q9UBI6 72 aa9.17□□□□□ -0.94
SNX1-204ENST00000559061 TCF19Q9Y242 345 aa9.17□□□□□ -0.94
SNX1-204ENST00000559061 TRBV6-7A0A0A0MS04 114 aa9.16□□□□□ -0.94
SNX1-204ENST00000559061 ZNF736B4DX44 427 aaPredicted RBP9.16□□□□□ -0.94
SNX1-204ENST00000559061 CTDSP2O14595 271 aa9.16□□□□□ -0.94
SNX1-204ENST00000559061 TOR1AO14656 332 aa9.16□□□□□ -0.94
SNX1-204ENST00000559061 HSD17B6O14756 317 aa9.16□□□□□ -0.94
SNX1-204ENST00000559061 TIMM23O14925 209 aa9.16□□□□□ -0.94
SNX1-204ENST00000559061 ST8SIA5O15466 376 aa9.16□□□□□ -0.94
SNX1-204ENST00000559061 APOA1P02647 267 aa9.16□□□□□ -0.94
SNX1-204ENST00000559061 HKR1P10072 659 aa9.16□□□□□ -0.94
SNX1-204ENST00000559061 OR3A3P47888 321 aa9.16□□□□□ -0.94
SNX1-204ENST00000559061 PRRX1P54821 245 aa9.16□□□□□ -0.94
SNX1-204ENST00000559061 ZNF816Q0VGE8 651 aaPredicted RBP9.16□□□□□ -0.94
SNX1-204ENST00000559061 ARFRP1Q13795 201 aa9.16□□□□□ -0.94
SNX1-204ENST00000559061 Q6ZS46 218 aa9.16□□□□□ -0.94
SNX1-204ENST00000559061 LAX1Q8IWV1 398 aa9.16□□□□□ -0.94
SNX1-204ENST00000559061 DRAM1Q8N682 238 aa9.16□□□□□ -0.94
SNX1-204ENST00000559061 OR4A4PQ8NGN8 299 aa9.16□□□□□ -0.94
SNX1-204ENST00000559061 OR5R1Q8NH85 324 aa9.16□□□□□ -0.94
SNX1-204ENST00000559061 RTN4IP1Q8WWV3 396 aaPredicted RBP9.16□□□□□ -0.94
SNX1-204ENST00000559061 TMEM158Q8WZ71 300 aa9.16□□□□□ -0.94
SNX1-204ENST00000559061 ABHD14AQ9BUJ0 271 aa9.16□□□□□ -0.94
SNX1-204ENST00000559061 NXF2Q9GZY0 626 aaKnown RBP9.16□□□□□ -0.94
SNX1-204ENST00000559061 C11orf54Q9H0W9 315 aaPredicted RBP9.16□□□□□ -0.94
SNX1-204ENST00000559061 SLC23A1Q9UHI7 598 aa9.16□□□□□ -0.94
SNX1-204ENST00000559061 SAA2-SAA4A0A096LPE2 208 aa9.15□□□□□ -0.94
SNX1-204ENST00000559061 IGHV1-3A0A0C4DH29 117 aa9.15□□□□□ -0.94
SNX1-204ENST00000559061 MEIS3P1A6NDR6 274 aa9.15□□□□□ -0.94
SNX1-204ENST00000559061 SCGNO76038 276 aa9.15□□□□□ -0.94
SNX1-204ENST00000559061 AMY1AP04745 511 aa9.15□□□□□ -0.94
SNX1-204ENST00000559061 AMY2AP04746 511 aa9.15□□□□□ -0.94
SNX1-204ENST00000559061 SAA2P0DJI9 122 aaPredicted RBP9.15□□□□□ -0.94
SNX1-204ENST00000559061 COMPP49747 757 aaPredicted RBP9.15□□□□□ -0.94
SNX1-204ENST00000559061 STEAP3Q658P3 488 aa9.15□□□□□ -0.94
SNX1-204ENST00000559061 Q6ZSV7 163 aa9.15□□□□□ -0.94
SNX1-204ENST00000559061 ZNF833PQ6ZTB9 187 aa9.15□□□□□ -0.94
SNX1-204ENST00000559061 OR10X1Q8NGY0 326 aa9.15□□□□□ -0.94
SNX1-204ENST00000559061 OR56B4Q8NH76 319 aa9.15□□□□□ -0.94
SNX1-204ENST00000559061 ACOT12Q8WYK0 555 aa9.15□□□□□ -0.94
SNX1-204ENST00000559061 TOMM40LQ969M1 308 aa9.15□□□□□ -0.94
SNX1-204ENST00000559061 RPEQ96AT9 228 aa9.15□□□□□ -0.94
SNX1-204ENST00000559061 CMTM3Q96MX0 182 aa9.15□□□□□ -0.94
SNX1-204ENST00000559061 DPAGT1Q9H3H5 408 aa9.15□□□□□ -0.94
SNX1-204ENST00000559061 RDH8Q9NYR8 311 aa9.15□□□□□ -0.94
SNX1-204ENST00000559061 STAB1Q9NY15 2570 aa9.14□□□□□ -0.95
SNX1-204ENST00000559061 IGHV3-72A0A0B4J1Y9 119 aa9.14□□□□□ -0.95
SNX1-204ENST00000559061 OOSP1A8MZH6 123 aa9.14□□□□□ -0.95
SNX1-204ENST00000559061 ITGB1BP1O14713 200 aa9.14□□□□□ -0.95
SNX1-204ENST00000559061 NDUFA7O95182 113 aa9.14□□□□□ -0.95
SNX1-204ENST00000559061 FCER2P06734 321 aa9.14□□□□□ -0.95
SNX1-204ENST00000559061 MDKP21741 143 aaPredicted RBP9.14□□□□□ -0.95
SNX1-204ENST00000559061 MNDAP41218 407 aa9.14□□□□□ -0.95
SNX1-204ENST00000559061 LINC00205P59089 165 aa9.14□□□□□ -0.95
SNX1-204ENST00000559061 GNG2P59768 71 aa9.14□□□□□ -0.95
SNX1-204ENST00000559061 KRTAP10-3P60369 221 aa9.14□□□□□ -0.95
SNX1-204ENST00000559061 RPL39P5Q59GN2 51 aa9.14□□□□□ -0.95
SNX1-204ENST00000559061 TMEM69Q5SWH9 247 aa9.14□□□□□ -0.95
SNX1-204ENST00000559061 HOGA1Q86XE5 327 aa9.14□□□□□ -0.95
SNX1-204ENST00000559061 H1FOOQ8IZA3 346 aaPredicted RBP9.14□□□□□ -0.95
SNX1-204ENST00000559061 LYG1Q8N1E2 194 aa9.14□□□□□ -0.95
SNX1-204ENST00000559061 Q8N6K4 173 aa9.14□□□□□ -0.95
SNX1-204ENST00000559061 ABHD14BQ96IU4 210 aa9.14□□□□□ -0.95
SNX1-204ENST00000559061 ST6GALNAC5Q9BVH7 336 aa9.14□□□□□ -0.95
SNX1-204ENST00000559061 MRPL20Q9BYC9 149 aaKnown RBP9.14□□□□□ -0.95
SNX1-204ENST00000559061 ZNF702PQ9H963 129 aa9.14□□□□□ -0.95
SNX1-204ENST00000559061 MGAT4AQ9UM21 535 aa9.14□□□□□ -0.95
SNX1-204ENST00000559061 AMMECR1Q9Y4X0 333 aaPredicted RBP9.14□□□□□ -0.95
SNX1-204ENST00000559061 IGKV1D-13A0A0B4J2D9 117 aa9.13□□□□□ -0.95
SNX1-204ENST00000559061 DPPA5A6NC42 116 aa9.13□□□□□ -0.95
SNX1-204ENST00000559061 LANCL1O43813 399 aa9.13□□□□□ -0.95
SNX1-204ENST00000559061 DIRAS3O95661 229 aa9.13□□□□□ -0.95
SNX1-204ENST00000559061 IGLV2-14P01704 120 aa9.13□□□□□ -0.95
SNX1-204ENST00000559061 SNRNP70P08621 437 aaKnown RBP9.13□□□□□ -0.95
SNX1-204ENST00000559061 IGKV1-13P0DP09 117 aa9.13□□□□□ -0.95
SNX1-204ENST00000559061 NAT1P18440 290 aa9.13□□□□□ -0.95
SNX1-204ENST00000559061 CEACAM3P40198 252 aa9.13□□□□□ -0.95
SNX1-204ENST00000559061 CEACAM6P40199 344 aa9.13□□□□□ -0.95
SNX1-204ENST00000559061 KIR2DS4P43632 304 aa9.13□□□□□ -0.95
SNX1-204ENST00000559061 RAB7AP51149 207 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms