RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 OR2W3Q7Z3T1 314 aa13.39□□□□□ -0.27
LRRC28-210ENST00000558879 RBMXL1Q96E39 390 aaKnown RBP13.39□□□□□ -0.27
LRRC28-210ENST00000558879 RCC1LQ96I51 464 aaKnown RBP13.39□□□□□ -0.27
LRRC28-210ENST00000558879 FAAP24Q9BTP7 215 aa13.39□□□□□ -0.27
LRRC28-210ENST00000558879 VCX3BQ9H321 246 aa13.39□□□□□ -0.27
LRRC28-210ENST00000558879 ZNF580Q9UK33 172 aa13.39□□□□□ -0.27
LRRC28-210ENST00000558879 TRBV6-6A0A0A6YYG2 114 aa13.38□□□□□ -0.27
LRRC28-210ENST00000558879 ARL6IP5O75915 188 aa13.38□□□□□ -0.27
LRRC28-210ENST00000558879 HSMCR30P0CW71 290 aa13.38□□□□□ -0.27
LRRC28-210ENST00000558879 HSPA13P48723 471 aa13.38□□□□□ -0.27
LRRC28-210ENST00000558879 THBS3P49746 956 aa13.38□□□□□ -0.27
LRRC28-210ENST00000558879 SLC35B1P78383 322 aa13.38□□□□□ -0.27
LRRC28-210ENST00000558879 FABP5Q01469 135 aa13.38□□□□□ -0.27
LRRC28-210ENST00000558879 CFHR3Q02985 330 aa13.38□□□□□ -0.27
LRRC28-210ENST00000558879 IZUMO2Q6UXV1 221 aa13.38□□□□□ -0.27
LRRC28-210ENST00000558879 ZNF833PQ6ZTB9 187 aa13.38□□□□□ -0.27
LRRC28-210ENST00000558879 C18orf65Q6ZTR6 163 aa13.38□□□□□ -0.27
LRRC28-210ENST00000558879 MOB1BQ7L9L4 216 aa13.38□□□□□ -0.27
LRRC28-210ENST00000558879 FAM89BQ8N5H3 189 aa13.38□□□□□ -0.27
LRRC28-210ENST00000558879 GALMQ96C23 342 aa13.38□□□□□ -0.27
LRRC28-210ENST00000558879 MGLLQ99685 303 aa13.38□□□□□ -0.27
LRRC28-210ENST00000558879 HSPB9Q9BQS6 159 aa13.38□□□□□ -0.27
LRRC28-210ENST00000558879 IFI27L2Q9H2X8 130 aa13.38□□□□□ -0.27
LRRC28-210ENST00000558879 ZFP57Q9NU63 452 aa13.38□□□□□ -0.27
LRRC28-210ENST00000558879 LRRC42Q9Y546 428 aa13.38□□□□□ -0.27
LRRC28-210ENST00000558879 SAA2-SAA4A0A096LPE2 208 aa13.37□□□□□ -0.27
LRRC28-210ENST00000558879 RGS11O94810 467 aa13.37□□□□□ -0.27
LRRC28-210ENST00000558879 DUS4LO95620 317 aaKnown RBP13.37□□□□□ -0.27
LRRC28-210ENST00000558879 SAA2P0DJI9 122 aaPredicted RBP13.37□□□□□ -0.27
LRRC28-210ENST00000558879 BLVRBP30043 206 aaPredicted RBP13.37□□□□□ -0.27
LRRC28-210ENST00000558879 F2RL1P55085 397 aa13.37□□□□□ -0.27
LRRC28-210ENST00000558879 FAM71F2Q6NXP2 309 aa13.37□□□□□ -0.27
LRRC28-210ENST00000558879 RNF152Q8N8N0 203 aa13.37□□□□□ -0.27
LRRC28-210ENST00000558879 OR51D1Q8NGF3 324 aa13.37□□□□□ -0.27
LRRC28-210ENST00000558879 NABP2Q9BQ15 211 aa13.37□□□□□ -0.27
LRRC28-210ENST00000558879 MRPL20Q9BYC9 149 aaKnown RBP13.37□□□□□ -0.27
LRRC28-210ENST00000558879 SOCS1O15524 211 aa13.36□□□□□ -0.27
LRRC28-210ENST00000558879 ARSBP15848 533 aa13.36□□□□□ -0.27
LRRC28-210ENST00000558879 MAP2K4P45985 399 aa13.36□□□□□ -0.27
LRRC28-210ENST00000558879 P2RY14Q15391 338 aa13.36□□□□□ -0.27
LRRC28-210ENST00000558879 TEX38Q6PEX7 206 aa13.36□□□□□ -0.27
LRRC28-210ENST00000558879 C8orf86Q6ZUL3 223 aa13.36□□□□□ -0.27
LRRC28-210ENST00000558879 MRPL41Q8IXM3 137 aaKnown RBP13.36□□□□□ -0.27
LRRC28-210ENST00000558879 MRAPQ8TCY5 172 aa13.36□□□□□ -0.27
LRRC28-210ENST00000558879 P2RX4Q99571 388 aa13.36□□□□□ -0.27
LRRC28-210ENST00000558879 RASL11BQ9BPW5 248 aa13.36□□□□□ -0.27
LRRC28-210ENST00000558879 URM1Q9BTM9 101 aaKnown RBP13.36□□□□□ -0.27
LRRC28-210ENST00000558879 CCDC90BQ9GZT6 254 aa13.36□□□□□ -0.27
LRRC28-210ENST00000558879 PLGRKTQ9HBL7 147 aa13.36□□□□□ -0.27
LRRC28-210ENST00000558879 PLEKHJ1Q9NW61 149 aa13.36□□□□□ -0.27
LRRC28-210ENST00000558879 AK3Q9UIJ7 227 aa13.36□□□□□ -0.27
LRRC28-210ENST00000558879 HSF4Q9ULV5 492 aa13.36□□□□□ -0.27
LRRC28-210ENST00000558879 AK6Q9Y3D8 172 aaKnown RBP13.36□□□□□ -0.27
LRRC28-210ENST00000558879 ITGB1BP1O14713 200 aa13.35□□□□□ -0.27
LRRC28-210ENST00000558879 LDLRAD4O15165 306 aa13.35□□□□□ -0.27
LRRC28-210ENST00000558879 IGF1P05019 195 aa13.35□□□□□ -0.27
LRRC28-210ENST00000558879 CALRP27797 417 aaKnown RBP13.35□□□□□ -0.27
LRRC28-210ENST00000558879 HLA-DRB3P79483 266 aa13.35□□□□□ -0.27
LRRC28-210ENST00000558879 EGFEM1PQ0D2K5 195 aa13.35□□□□□ -0.27
LRRC28-210ENST00000558879 SSX1Q16384 188 aa13.35□□□□□ -0.27
LRRC28-210ENST00000558879 ZNF367Q7RTV3 350 aa13.35□□□□□ -0.27
LRRC28-210ENST00000558879 KLHL30-AS1Q8NEE0 82 aa13.35□□□□□ -0.27
LRRC28-210ENST00000558879 OR2AK2Q8NG84 335 aa13.35□□□□□ -0.27
LRRC28-210ENST00000558879 ZNF251Q9BRH9 671 aa13.35□□□□□ -0.27
LRRC28-210ENST00000558879 HDHD3Q9BSH5 251 aaPredicted RBP13.35□□□□□ -0.27
LRRC28-210ENST00000558879 GON7Q9BXV9 100 aa13.35□□□□□ -0.27
LRRC28-210ENST00000558879 RIMS4Q9H426 269 aaPredicted RBP13.35□□□□□ -0.27
LRRC28-210ENST00000558879 ABRACLQ9P1F3 81 aa13.35□□□□□ -0.27
LRRC28-210ENST00000558879 RRP9O43818 475 aaKnown RBP13.34□□□□□ -0.27
LRRC28-210ENST00000558879 NDUFA3O95167 84 aa13.34□□□□□ -0.27
LRRC28-210ENST00000558879 IGHG4P01861 327 aa13.34□□□□□ -0.27
LRRC28-210ENST00000558879 SOX6P35712 828 aa13.34□□□□□ -0.27
LRRC28-210ENST00000558879 MYCNOSP40205 109 aa13.34□□□□□ -0.27
LRRC28-210ENST00000558879 OR3A3P47888 321 aa13.34□□□□□ -0.27
LRRC28-210ENST00000558879 TMEM50BP56557 158 aa13.34□□□□□ -0.27
LRRC28-210ENST00000558879 ACTBP60709 375 aa13.34□□□□□ -0.27
LRRC28-210ENST00000558879 FOXE3Q13461 319 aa13.34□□□□□ -0.27
LRRC28-210ENST00000558879 MMDQ15546 238 aa13.34□□□□□ -0.27
LRRC28-210ENST00000558879 RAB11BQ15907 218 aa13.34□□□□□ -0.27
LRRC28-210ENST00000558879 PNLIPRP3Q17RR3 467 aa13.34□□□□□ -0.27
LRRC28-210ENST00000558879 ZNF695Q8IW36 515 aa13.34□□□□□ -0.27
LRRC28-210ENST00000558879 CNBD2Q96M20 576 aa13.34□□□□□ -0.27
LRRC28-210ENST00000558879 PARP12Q9H0J9 701 aaKnown RBP13.34□□□□□ -0.27
LRRC28-210ENST00000558879 CHMP1AQ9HD42 196 aaPredicted RBP13.34□□□□□ -0.27
LRRC28-210ENST00000558879 ACOT13Q9NPJ3 140 aa13.34□□□□□ -0.27
LRRC28-210ENST00000558879 STEAP1Q9UHE8 339 aa13.34□□□□□ -0.27
LRRC28-210ENST00000558879 BLOC1S6Q9UL45 172 aa13.34□□□□□ -0.27
LRRC28-210ENST00000558879 SHISA3A0PJX4 238 aa13.33□□□□□ -0.28
LRRC28-210ENST00000558879 ST8SIA5O15466 376 aa13.33□□□□□ -0.28
LRRC28-210ENST00000558879 HLA-DRB1P01911 266 aa13.33□□□□□ -0.28
LRRC28-210ENST00000558879 RPLP1P05386 114 aaKnown RBP13.33□□□□□ -0.28
LRRC28-210ENST00000558879 ELANEP08246 267 aa13.33□□□□□ -0.28
LRRC28-210ENST00000558879 SLC2A2P11168 524 aaPredicted RBP13.33□□□□□ -0.28
LRRC28-210ENST00000558879 CNTFRP26992 372 aa13.33□□□□□ -0.28
LRRC28-210ENST00000558879 CLDN12P56749 244 aa13.33□□□□□ -0.28
LRRC28-210ENST00000558879 CD200R1LQ6Q8B3 271 aa13.33□□□□□ -0.28
LRRC28-210ENST00000558879 MYOZ3Q8TDC0 251 aa13.33□□□□□ -0.28
LRRC28-210ENST00000558879 IL1F10Q8WWZ1 152 aa13.33□□□□□ -0.28
LRRC28-210ENST00000558879 AGMATQ9BSE5 352 aa13.33□□□□□ -0.28
LRRC28-210ENST00000558879 C12orf4Q9NQ89 552 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms