RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 IGKV1D-17A0A075B6S4 117 aa12.9□□□□□ -0.34
CDC42BPB-203ENST00000558867 A0A0B4J293 547 aa12.9□□□□□ -0.34
CDC42BPB-203ENST00000558867 K7EIL1 84 aa12.9□□□□□ -0.34
CDC42BPB-203ENST00000558867 PRAF2O60831 178 aa12.9□□□□□ -0.34
CDC42BPB-203ENST00000558867 DHFRP00374 187 aa12.9□□□□□ -0.34
CDC42BPB-203ENST00000558867 TFF1P04155 84 aa12.9□□□□□ -0.34
CDC42BPB-203ENST00000558867 PAX6P26367 422 aa12.9□□□□□ -0.34
CDC42BPB-203ENST00000558867 GPM6AP51674 278 aa12.9□□□□□ -0.34
CDC42BPB-203ENST00000558867 IL24Q13007 206 aa12.9□□□□□ -0.34
CDC42BPB-203ENST00000558867 MEF2DQ14814 521 aa12.9□□□□□ -0.34
CDC42BPB-203ENST00000558867 TATDN3Q17R31 274 aa12.9□□□□□ -0.34
CDC42BPB-203ENST00000558867 STEAP1BQ6NZ63 245 aa12.9□□□□□ -0.34
CDC42BPB-203ENST00000558867 ZNF561Q8N587 486 aa12.9□□□□□ -0.34
CDC42BPB-203ENST00000558867 OR4C16Q8NGL9 310 aa12.9□□□□□ -0.34
CDC42BPB-203ENST00000558867 OR13D1Q8NGV5 346 aa12.9□□□□□ -0.34
CDC42BPB-203ENST00000558867 PECRQ9BY49 303 aa12.9□□□□□ -0.34
CDC42BPB-203ENST00000558867 WNT10AQ9GZT5 417 aa12.9□□□□□ -0.34
CDC42BPB-203ENST00000558867 C19orf12Q9NSK7 152 aa12.9□□□□□ -0.34
CDC42BPB-203ENST00000558867 SLC2A8Q9NY64 477 aa12.9□□□□□ -0.34
CDC42BPB-203ENST00000558867 KCNK7Q9Y2U2 307 aa12.9□□□□□ -0.34
CDC42BPB-203ENST00000558867 A0A1W2PRX2 142 aa12.89□□□□□ -0.35
CDC42BPB-203ENST00000558867 HMX3A6NHT5 357 aa12.89□□□□□ -0.35
CDC42BPB-203ENST00000558867 ADARB2-AS1A8MUL3 147 aa12.89□□□□□ -0.35
CDC42BPB-203ENST00000558867 SSX5O60225 188 aa12.89□□□□□ -0.35
CDC42BPB-203ENST00000558867 NDUFB6O95139 128 aa12.89□□□□□ -0.35
CDC42BPB-203ENST00000558867 HTR3BO95264 441 aa12.89□□□□□ -0.35
CDC42BPB-203ENST00000558867 GNB3P16520 340 aa12.89□□□□□ -0.35
CDC42BPB-203ENST00000558867 BLVRBP30043 206 aaPredicted RBP12.89□□□□□ -0.35
CDC42BPB-203ENST00000558867 GNG2P59768 71 aa12.89□□□□□ -0.35
CDC42BPB-203ENST00000558867 RBMS2Q15434 407 aaKnown RBP12.89□□□□□ -0.35
CDC42BPB-203ENST00000558867 SMIM21Q3B7S5 101 aa12.89□□□□□ -0.35
CDC42BPB-203ENST00000558867 ACTBL2Q562R1 376 aa12.89□□□□□ -0.35
CDC42BPB-203ENST00000558867 DMRTC1Q5HYR2 192 aa12.89□□□□□ -0.35
CDC42BPB-203ENST00000558867 TMEM200BQ69YZ2 307 aa12.89□□□□□ -0.35
CDC42BPB-203ENST00000558867 C11orf87Q6NUJ2 197 aa12.89□□□□□ -0.35
CDC42BPB-203ENST00000558867 TRAPPC6BQ86SZ2 158 aa12.89□□□□□ -0.35
CDC42BPB-203ENST00000558867 LINC00596Q86U02 117 aa12.89□□□□□ -0.35
CDC42BPB-203ENST00000558867 OR5AU1Q8NGC0 362 aa12.89□□□□□ -0.35
CDC42BPB-203ENST00000558867 OR10K1Q8NGX5 313 aa12.89□□□□□ -0.35
CDC42BPB-203ENST00000558867 ARHGAP5-AS1Q96IT6 56 aa12.89□□□□□ -0.35
CDC42BPB-203ENST00000558867 NUDT15Q9NV35 164 aa12.89□□□□□ -0.35
CDC42BPB-203ENST00000558867 ZNF222Q9UK12 451 aa12.89□□□□□ -0.35
CDC42BPB-203ENST00000558867 A6NDX4 124 aa12.88□□□□□ -0.35
CDC42BPB-203ENST00000558867 ZNF736B4DX44 427 aaPredicted RBP12.88□□□□□ -0.35
CDC42BPB-203ENST00000558867 ZNF732B4DXR9 585 aa12.88□□□□□ -0.35
CDC42BPB-203ENST00000558867 J3QT63 122 aa12.88□□□□□ -0.35
CDC42BPB-203ENST00000558867 RHBDL1O75783 438 aa12.88□□□□□ -0.35
CDC42BPB-203ENST00000558867 CD3DP04234 171 aa12.88□□□□□ -0.35
CDC42BPB-203ENST00000558867 ARG1P05089 322 aa12.88□□□□□ -0.35
CDC42BPB-203ENST00000558867 H2AFB2P0C5Z0 115 aa12.88□□□□□ -0.35
CDC42BPB-203ENST00000558867 CHATP28329 748 aa12.88□□□□□ -0.35
CDC42BPB-203ENST00000558867 CCR6P51684 374 aa12.88□□□□□ -0.35
CDC42BPB-203ENST00000558867 RBM11P57052 281 aaKnown RBP12.88□□□□□ -0.35
CDC42BPB-203ENST00000558867 CD83Q01151 205 aa12.88□□□□□ -0.35
CDC42BPB-203ENST00000558867 SLC25A26Q70HW3 274 aa12.88□□□□□ -0.35
CDC42BPB-203ENST00000558867 CENPVQ7Z7K6 275 aaPredicted RBP12.88□□□□□ -0.35
CDC42BPB-203ENST00000558867 TMEM219Q86XT9 240 aa12.88□□□□□ -0.35
CDC42BPB-203ENST00000558867 WIPF2Q8TF74 440 aaPredicted RBP12.88□□□□□ -0.35
CDC42BPB-203ENST00000558867 CAPSLQ8WWF8 208 aa12.88□□□□□ -0.35
CDC42BPB-203ENST00000558867 AKR1E2Q96JD6 320 aa12.88□□□□□ -0.35
CDC42BPB-203ENST00000558867 C20orf85Q9H1P6 137 aa12.88□□□□□ -0.35
CDC42BPB-203ENST00000558867 OR51I2Q9H344 312 aa12.88□□□□□ -0.35
CDC42BPB-203ENST00000558867 ZMAT5Q9UDW3 170 aaKnown RBP12.88□□□□□ -0.35
CDC42BPB-203ENST00000558867 TSSC4Q9Y5U2 329 aaPredicted RBP12.88□□□□□ -0.35
CDC42BPB-203ENST00000558867 RYR3Q15413 4870 aa12.87□□□□□ -0.35
CDC42BPB-203ENST00000558867 TCRBV4S1A1TA0A5B7 111 aa12.87□□□□□ -0.35
CDC42BPB-203ENST00000558867 RFPL4AA6NLU0 287 aa12.87□□□□□ -0.35
CDC42BPB-203ENST00000558867 RFPL4AL1F8VTS6 287 aa12.87□□□□□ -0.35
CDC42BPB-203ENST00000558867 RAB3DO95716 219 aa12.87□□□□□ -0.35
CDC42BPB-203ENST00000558867 PRDX2P32119 198 aa12.87□□□□□ -0.35
CDC42BPB-203ENST00000558867 HAAOP46952 286 aa12.87□□□□□ -0.35
CDC42BPB-203ENST00000558867 RAB13P51153 203 aa12.87□□□□□ -0.35
CDC42BPB-203ENST00000558867 SSX2Q16385 188 aa12.87□□□□□ -0.35
CDC42BPB-203ENST00000558867 MPV17LQ2QL34 196 aa12.87□□□□□ -0.35
CDC42BPB-203ENST00000558867 SIGIRRQ6IA17 410 aa12.87□□□□□ -0.35
CDC42BPB-203ENST00000558867 LHFPL4Q7Z7J7 247 aa12.87□□□□□ -0.35
CDC42BPB-203ENST00000558867 AKAP14Q86UN6 197 aa12.87□□□□□ -0.35
CDC42BPB-203ENST00000558867 Q8IYB0 196 aa12.87□□□□□ -0.35
CDC42BPB-203ENST00000558867 NUDCD2Q8WVJ2 157 aa12.87□□□□□ -0.35
CDC42BPB-203ENST00000558867 SLC25A21Q9BQT8 299 aaPredicted RBP12.87□□□□□ -0.35
CDC42BPB-203ENST00000558867 CHST6Q9GZX3 395 aa12.87□□□□□ -0.35
CDC42BPB-203ENST00000558867 GHITMQ9H3K2 345 aa12.87□□□□□ -0.35
CDC42BPB-203ENST00000558867 IFT22Q9H7X7 185 aa12.87□□□□□ -0.35
CDC42BPB-203ENST00000558867 IFT46Q9NQC8 304 aa12.87□□□□□ -0.35
CDC42BPB-203ENST00000558867 ELF5Q9UKW6 265 aaPredicted RBP12.87□□□□□ -0.35
CDC42BPB-203ENST00000558867 ALG5Q9Y673 324 aa12.87□□□□□ -0.35
CDC42BPB-203ENST00000558867 PDCD6O75340 191 aa12.86□□□□□ -0.35
CDC42BPB-203ENST00000558867 IL5P05113 134 aa12.86□□□□□ -0.35
CDC42BPB-203ENST00000558867 GLAP06280 429 aa12.86□□□□□ -0.35
CDC42BPB-203ENST00000558867 ZNF735P0CB33 412 aa12.86□□□□□ -0.35
CDC42BPB-203ENST00000558867 DTYMKP23919 212 aa12.86□□□□□ -0.35
CDC42BPB-203ENST00000558867 DYNLT3P51808 116 aa12.86□□□□□ -0.35
CDC42BPB-203ENST00000558867 IL13RA2Q14627 380 aa12.86□□□□□ -0.35
CDC42BPB-203ENST00000558867 HAGHLQ6PII5 290 aaPredicted RBP12.86□□□□□ -0.35
CDC42BPB-203ENST00000558867 ZNF782Q6ZMW2 699 aaPredicted RBP12.86□□□□□ -0.35
CDC42BPB-203ENST00000558867 ACP7Q6ZNF0 438 aa12.86□□□□□ -0.35
CDC42BPB-203ENST00000558867 HOGA1Q86XE5 327 aa12.86□□□□□ -0.35
CDC42BPB-203ENST00000558867 B9D2Q9BPU9 175 aa12.86□□□□□ -0.35
CDC42BPB-203ENST00000558867 ALX4Q9H161 411 aaPredicted RBP12.86□□□□□ -0.35
CDC42BPB-203ENST00000558867 RCC2Q9P258 522 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms