RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 CXCL10P02778 98 aa12.17□□□□□ -0.46
SPG11-210ENST00000558319 PRSS2P07478 247 aa12.17□□□□□ -0.46
SPG11-210ENST00000558319 VDAC1P21796 283 aa12.17□□□□□ -0.46
SPG11-210ENST00000558319 PRB3Q04118 309 aaPredicted RBP12.17□□□□□ -0.46
SPG11-210ENST00000558319 IZUMO4Q1ZYL8 232 aa12.17□□□□□ -0.46
SPG11-210ENST00000558319 PAXXQ9BUH6 204 aa12.17□□□□□ -0.46
SPG11-210ENST00000558319 CFDP00746 253 aaPredicted RBP12.17□□□□□ -0.46
SPG11-210ENST00000558319 PRF1P14222 555 aa12.17□□□□□ -0.46
SPG11-210ENST00000558319 RASL10BQ96S79 203 aa12.17□□□□□ -0.46
SPG11-210ENST00000558319 IGHV3-35A0A0C4DH35 117 aa12.17□□□□□ -0.46
SPG11-210ENST00000558319 TNFSF14O43557 240 aa12.17□□□□□ -0.46
SPG11-210ENST00000558319 SLC25A17O43808 307 aa12.17□□□□□ -0.46
SPG11-210ENST00000558319 SEC11BP0C7V7 166 aa12.17□□□□□ -0.46
SPG11-210ENST00000558319 IBA57Q5T440 356 aaKnown RBP12.17□□□□□ -0.46
SPG11-210ENST00000558319 ZAR1Q86SH2 424 aa12.17□□□□□ -0.46
SPG11-210ENST00000558319 ZNF519Q8TB69 540 aa12.17□□□□□ -0.46
SPG11-210ENST00000558319 ZNF638Q14966 1978 aaKnown RBP12.17□□□□□ -0.46
SPG11-210ENST00000558319 ITGB4P16144 1822 aa12.17□□□□□ -0.46
SPG11-210ENST00000558319 SNAI2O43623 268 aa12.16□□□□□ -0.46
SPG11-210ENST00000558319 TGFAP01135 160 aa12.16□□□□□ -0.46
SPG11-210ENST00000558319 IGHV3-48P01763 117 aa12.16□□□□□ -0.46
SPG11-210ENST00000558319 REG1AP05451 166 aa12.16□□□□□ -0.46
SPG11-210ENST00000558319 NMBP08949 121 aa12.16□□□□□ -0.46
SPG11-210ENST00000558319 DRD3P35462 400 aa12.16□□□□□ -0.46
SPG11-210ENST00000558319 RHBDD2Q6NTF9 364 aa12.16□□□□□ -0.46
SPG11-210ENST00000558319 COLQQ9Y215 455 aaPredicted RBP12.16□□□□□ -0.46
SPG11-210ENST00000558319 KCNMB2Q9Y691 235 aa12.16□□□□□ -0.46
SPG11-210ENST00000558319 SELENOKQ9Y6D0 94 aa12.16□□□□□ -0.46
SPG11-210ENST00000558319 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.16□□□□□ -0.46
SPG11-210ENST00000558319 H3BTX0 84 aa12.16□□□□□ -0.46
SPG11-210ENST00000558319 OR2A4O95047 310 aa12.16□□□□□ -0.46
SPG11-210ENST00000558319 LEPROTL1O95214 131 aa12.16□□□□□ -0.46
SPG11-210ENST00000558319 TMEM211Q6ICI0 200 aa12.16□□□□□ -0.46
SPG11-210ENST00000558319 OR2A7Q96R45 310 aa12.16□□□□□ -0.46
SPG11-210ENST00000558319 NUDT16L1Q9BRJ7 211 aaKnown RBP12.16□□□□□ -0.46
SPG11-210ENST00000558319 PCM1Q15154 2024 aa12.16□□□□□ -0.46
SPG11-210ENST00000558319 TRAV38-1A0A0B4J264 116 aa12.16□□□□□ -0.46
SPG11-210ENST00000558319 CKS2P33552 79 aa12.16□□□□□ -0.46
SPG11-210ENST00000558319 SPINT1O43278 529 aa12.16□□□□□ -0.46
SPG11-210ENST00000558319 CISD3P0C7P0 127 aa12.16□□□□□ -0.46
SPG11-210ENST00000558319 SLC25A34Q6PIV7 304 aa12.16□□□□□ -0.46
SPG11-210ENST00000558319 MDP1Q86V88 176 aa12.16□□□□□ -0.46
SPG11-210ENST00000558319 OR4C13Q8NGP0 309 aa12.16□□□□□ -0.46
SPG11-210ENST00000558319 CCL13Q99616 98 aa12.16□□□□□ -0.46
SPG11-210ENST00000558319 MBD1Q9UIS9 605 aaPredicted RBP12.16□□□□□ -0.46
SPG11-210ENST00000558319 MYO5AQ9Y4I1 1855 aaKnown RBP12.16□□□□□ -0.46
SPG11-210ENST00000558319 NXPH1P58417 271 aa12.16□□□□□ -0.46
SPG11-210ENST00000558319 MMDQ15546 238 aa12.16□□□□□ -0.46
SPG11-210ENST00000558319 OR2Y1Q8NGV0 311 aa12.16□□□□□ -0.46
SPG11-210ENST00000558319 IGHV3-66A0A0C4DH42 116 aa12.15□□□□□ -0.46
SPG11-210ENST00000558319 TMEM189A5PLL7 270 aa12.15□□□□□ -0.46
SPG11-210ENST00000558319 FAM181BA6NEQ2 426 aa12.15□□□□□ -0.46
SPG11-210ENST00000558319 C1QCP02747 245 aa12.15□□□□□ -0.46
SPG11-210ENST00000558319 RSPO4Q2I0M5 234 aaPredicted RBP12.15□□□□□ -0.46
SPG11-210ENST00000558319 MBD3L1Q8WWY6 194 aa12.15□□□□□ -0.46
SPG11-210ENST00000558319 TLNRD1Q9H1K6 362 aa12.15□□□□□ -0.46
SPG11-210ENST00000558319 PRSS23O95084 383 aa12.15□□□□□ -0.46
SPG11-210ENST00000558319 PPP1CCP36873 323 aaKnown RBP12.15□□□□□ -0.46
SPG11-210ENST00000558319 HMGA2P52926 109 aa12.15□□□□□ -0.46
SPG11-210ENST00000558319 HERPUD1Q15011 391 aa12.15□□□□□ -0.46
SPG11-210ENST00000558319 HCP5Q6MZN7 132 aa12.15□□□□□ -0.46
SPG11-210ENST00000558319 LIMS2Q7Z4I7 341 aa12.15□□□□□ -0.46
SPG11-210ENST00000558319 Q8WTZ3 238 aa12.15□□□□□ -0.46
SPG11-210ENST00000558319 OIT3Q8WWZ8 545 aa12.15□□□□□ -0.46
SPG11-210ENST00000558319 SGK494Q96LW2 274 aa12.15□□□□□ -0.46
SPG11-210ENST00000558319 NKX2-8O15522 239 aa12.15□□□□□ -0.46
SPG11-210ENST00000558319 CD300LDQ6UXZ3 194 aa12.15□□□□□ -0.46
SPG11-210ENST00000558319 TMEM91Q6ZNR0 172 aa12.15□□□□□ -0.46
SPG11-210ENST00000558319 CADM4Q8NFZ8 388 aa12.15□□□□□ -0.46
SPG11-210ENST00000558319 A0A1B0GV72 72 aa12.15□□□□□ -0.46
SPG11-210ENST00000558319 PQLC2Q6ZP29 291 aa12.15□□□□□ -0.46
SPG11-210ENST00000558319 C10orf126Q8N4M7 172 aa12.15□□□□□ -0.46
SPG11-210ENST00000558319 ASB5Q8WWX0 329 aa12.15□□□□□ -0.46
SPG11-210ENST00000558319 LSM10Q969L4 123 aaKnown RBP12.15□□□□□ -0.46
SPG11-210ENST00000558319 ST6GALNAC6Q969X2 333 aa12.15□□□□□ -0.46
SPG11-210ENST00000558319 HARBI1Q96MB7 349 aa12.15□□□□□ -0.46
SPG11-210ENST00000558319 ZNF665Q9H7R5 613 aa12.15□□□□□ -0.46
SPG11-210ENST00000558319 PRDM6Q9NQX0 595 aa12.15□□□□□ -0.46
SPG11-210ENST00000558319 TRGC1P0CF51 173 aa12.15□□□□□ -0.46
SPG11-210ENST00000558319 ZNF345Q14585 488 aa12.15□□□□□ -0.46
SPG11-210ENST00000558319 ZNF660Q6AZW8 331 aaPredicted RBP12.15□□□□□ -0.46
SPG11-210ENST00000558319 ZNF441Q8N8Z8 693 aa12.15□□□□□ -0.46
SPG11-210ENST00000558319 OR2V2Q96R30 315 aa12.15□□□□□ -0.46
SPG11-210ENST00000558319 WNT16Q9UBV4 365 aa12.15□□□□□ -0.46
SPG11-210ENST00000558319 RAXQ9Y2V3 346 aa12.15□□□□□ -0.46
SPG11-210ENST00000558319 A0A0B4J293 547 aa12.14□□□□□ -0.47
SPG11-210ENST00000558319 TSPAN2O60636 221 aa12.14□□□□□ -0.47
SPG11-210ENST00000558319 IGHV4-34P06331 123 aa12.14□□□□□ -0.47
SPG11-210ENST00000558319 ROM1Q03395 351 aa12.14□□□□□ -0.47
SPG11-210ENST00000558319 REC114Q7Z4M0 266 aa12.14□□□□□ -0.47
SPG11-210ENST00000558319 SH3BGRL3Q9H299 93 aa12.14□□□□□ -0.47
SPG11-210ENST00000558319 IL19Q9UHD0 177 aa12.14□□□□□ -0.47
SPG11-210ENST00000558319 OR51B2Q9Y5P1 312 aa12.14□□□□□ -0.47
SPG11-210ENST00000558319 DMRT1Q9Y5R6 373 aa12.14□□□□□ -0.47
SPG11-210ENST00000558319 S4R3C0 116 aa12.14□□□□□ -0.47
SPG11-210ENST00000558319 SRIP30626 198 aa12.14□□□□□ -0.47
SPG11-210ENST00000558319 GMPPAQ96IJ6 420 aaPredicted RBP12.14□□□□□ -0.47
SPG11-210ENST00000558319 WNT10AQ9GZT5 417 aa12.14□□□□□ -0.47
SPG11-210ENST00000558319 PXMP4Q9Y6I8 212 aa12.14□□□□□ -0.47
SPG11-210ENST00000558319 HBZP02008 142 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms