RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 SULT4A1Q9BR01 284 aa12.15□□□□□ -0.46
TPM1-211ENST00000558314 UQCC2Q9BRT2 126 aa12.15□□□□□ -0.46
TPM1-211ENST00000558314 C8orf4Q9NR00 106 aa12.15□□□□□ -0.46
TPM1-211ENST00000558314 ABRACLQ9P1F3 81 aa12.15□□□□□ -0.46
TPM1-211ENST00000558314 JPT1Q9UK76 154 aa12.15□□□□□ -0.46
TPM1-211ENST00000558314 A3GALT2U3KPV4 340 aa12.15□□□□□ -0.46
TPM1-211ENST00000558314 PTGES3LE9PB15 166 aa12.14□□□□□ -0.47
TPM1-211ENST00000558314 ATP6V0E1O15342 81 aa12.14□□□□□ -0.47
TPM1-211ENST00000558314 SC5DO75845 299 aa12.14□□□□□ -0.47
TPM1-211ENST00000558314 IGHG4P01861 327 aa12.14□□□□□ -0.47
TPM1-211ENST00000558314 GLAP06280 429 aa12.14□□□□□ -0.47
TPM1-211ENST00000558314 PLGLAQ15195 96 aa12.14□□□□□ -0.47
TPM1-211ENST00000558314 ECSCRQ19T08 205 aa12.14□□□□□ -0.47
TPM1-211ENST00000558314 GLT8D1Q68CQ7 371 aa12.14□□□□□ -0.47
TPM1-211ENST00000558314 GAPTQ8N292 157 aa12.14□□□□□ -0.47
TPM1-211ENST00000558314 NANOGP1Q8N7R0 232 aa12.14□□□□□ -0.47
TPM1-211ENST00000558314 C4orf3Q8WVX3 66 aa12.14□□□□□ -0.47
TPM1-211ENST00000558314 ASCL2Q99929 193 aa12.14□□□□□ -0.47
TPM1-211ENST00000558314 NABP2Q9BQ15 211 aa12.14□□□□□ -0.47
TPM1-211ENST00000558314 TMEM59Q9BXS4 323 aa12.14□□□□□ -0.47
TPM1-211ENST00000558314 ANKRD60Q9BZ19 345 aa12.14□□□□□ -0.47
TPM1-211ENST00000558314 KLK15Q9H2R5 256 aa12.14□□□□□ -0.47
TPM1-211ENST00000558314 MBNL3Q9NUK0 354 aaKnown RBP12.14□□□□□ -0.47
TPM1-211ENST00000558314 KIAA1456Q9P272 454 aa12.14□□□□□ -0.47
TPM1-211ENST00000558314 STEAP1Q9UHE8 339 aa12.14□□□□□ -0.47
TPM1-211ENST00000558314 SAA2-SAA4A0A096LPE2 208 aa12.13□□□□□ -0.47
TPM1-211ENST00000558314 NBR2O15453 112 aa12.13□□□□□ -0.47
TPM1-211ENST00000558314 RAMP3O60896 148 aa12.13□□□□□ -0.47
TPM1-211ENST00000558314 SAA2P0DJI9 122 aaPredicted RBP12.13□□□□□ -0.47
TPM1-211ENST00000558314 BLVRBP30043 206 aaPredicted RBP12.13□□□□□ -0.47
TPM1-211ENST00000558314 CFHR3Q02985 330 aa12.13□□□□□ -0.47
TPM1-211ENST00000558314 STEAP3Q658P3 488 aa12.13□□□□□ -0.47
TPM1-211ENST00000558314 FAM131AQ6UXB0 335 aa12.13□□□□□ -0.47
TPM1-211ENST00000558314 CEACAM19Q7Z692 300 aa12.13□□□□□ -0.47
TPM1-211ENST00000558314 CASTOR1Q8WTX7 329 aa12.13□□□□□ -0.47
TPM1-211ENST00000558314 THRSPQ92748 146 aa12.13□□□□□ -0.47
TPM1-211ENST00000558314 NICN1Q9BSH3 213 aa12.13□□□□□ -0.47
TPM1-211ENST00000558314 MND1Q9BWT6 205 aa12.13□□□□□ -0.47
TPM1-211ENST00000558314 OR51J1Q9H342 316 aa12.13□□□□□ -0.47
TPM1-211ENST00000558314 GNB4Q9HAV0 340 aa12.13□□□□□ -0.47
TPM1-211ENST00000558314 GHRLQ9UBU3 117 aa12.13□□□□□ -0.47
TPM1-211ENST00000558314 TRAV41A0A0B4J266 112 aa12.12□□□□□ -0.47
TPM1-211ENST00000558314 YPEL1O60688 119 aa12.12□□□□□ -0.47
TPM1-211ENST00000558314 IGF1P05019 195 aa12.12□□□□□ -0.47
TPM1-211ENST00000558314 CD1AP06126 327 aa12.12□□□□□ -0.47
TPM1-211ENST00000558314 UBBP0CG47 229 aa12.12□□□□□ -0.47
TPM1-211ENST00000558314 PSMB8P28062 276 aa12.12□□□□□ -0.47
TPM1-211ENST00000558314 CHATP28329 748 aa12.12□□□□□ -0.47
TPM1-211ENST00000558314 HTR2CP28335 458 aa12.12□□□□□ -0.47
TPM1-211ENST00000558314 RPS27AP62979 156 aaKnown RBP12.12□□□□□ -0.47
TPM1-211ENST00000558314 HTD2P86397 168 aa12.12□□□□□ -0.47
TPM1-211ENST00000558314 MED22Q15528 200 aa12.12□□□□□ -0.47
TPM1-211ENST00000558314 HSD17B12Q53GQ0 312 aa12.12□□□□□ -0.47
TPM1-211ENST00000558314 RPL39P5Q59GN2 51 aa12.12□□□□□ -0.47
TPM1-211ENST00000558314 LIN54Q6MZP7 749 aa12.12□□□□□ -0.47
TPM1-211ENST00000558314 GLDNQ6ZMI3 551 aaPredicted RBP12.12□□□□□ -0.47
TPM1-211ENST00000558314 LYPD6Q86Y78 171 aa12.12□□□□□ -0.47
TPM1-211ENST00000558314 ODF3L1Q8IXM7 274 aa12.12□□□□□ -0.47
TPM1-211ENST00000558314 OR1N2Q8NGR9 330 aa12.12□□□□□ -0.47
TPM1-211ENST00000558314 TMEM203Q969S6 136 aa12.12□□□□□ -0.47
TPM1-211ENST00000558314 WWC2-AS2Q96NR7 200 aa12.12□□□□□ -0.47
TPM1-211ENST00000558314 YPEL2Q96QA6 119 aa12.12□□□□□ -0.47
TPM1-211ENST00000558314 CLCC1Q96S66 551 aa12.12□□□□□ -0.47
TPM1-211ENST00000558314 PLEKHJ1Q9NW61 149 aa12.12□□□□□ -0.47
TPM1-211ENST00000558314 VSIG4Q9Y279 399 aa12.12□□□□□ -0.47
TPM1-211ENST00000558314 IGHV7-81A0A0B4J1V7 117 aa12.11□□□□□ -0.47
TPM1-211ENST00000558314 ANKRD65E5RJM6 399 aa12.11□□□□□ -0.47
TPM1-211ENST00000558314 H7C2Y5 167 aa12.11□□□□□ -0.47
TPM1-211ENST00000558314 P2RY14Q15391 338 aa12.11□□□□□ -0.47
TPM1-211ENST00000558314 C5orf64Q2M2E5 130 aa12.11□□□□□ -0.47
TPM1-211ENST00000558314 LRRTM1Q86UE6 522 aa12.11□□□□□ -0.47
TPM1-211ENST00000558314 MS4A15Q8N5U1 240 aa12.11□□□□□ -0.47
TPM1-211ENST00000558314 RNF152Q8N8N0 203 aa12.11□□□□□ -0.47
TPM1-211ENST00000558314 ALX4Q9H161 411 aaPredicted RBP12.11□□□□□ -0.47
TPM1-211ENST00000558314 VCXQ9H320 206 aa12.11□□□□□ -0.47
TPM1-211ENST00000558314 FBXL15Q9H469 300 aa12.11□□□□□ -0.47
TPM1-211ENST00000558314 PLCXD1Q9NUJ7 323 aa12.11□□□□□ -0.47
TPM1-211ENST00000558314 A0A1W2PN81 502 aa12.1□□□□□ -0.47
TPM1-211ENST00000558314 HSPA12AO43301 675 aa12.1□□□□□ -0.47
TPM1-211ENST00000558314 HLA-DRB1P01911 266 aa12.1□□□□□ -0.47
TPM1-211ENST00000558314 CDK1P06493 297 aa12.1□□□□□ -0.47
TPM1-211ENST00000558314 GSTP1P09211 210 aaKnown RBP12.1□□□□□ -0.47
TPM1-211ENST00000558314 HSMCR30P0CW71 290 aa12.1□□□□□ -0.47
TPM1-211ENST00000558314 CHRNA7P36544 502 aa12.1□□□□□ -0.47
TPM1-211ENST00000558314 GNB1P62873 340 aa12.1□□□□□ -0.47
TPM1-211ENST00000558314 ZNF616Q08AN1 781 aa12.1□□□□□ -0.47
TPM1-211ENST00000558314 HMGN3Q15651 99 aa12.1□□□□□ -0.47
TPM1-211ENST00000558314 OGFRL1Q5TC84 451 aaPredicted RBP12.1□□□□□ -0.47
TPM1-211ENST00000558314 ZNF833PQ6ZTB9 187 aa12.1□□□□□ -0.47
TPM1-211ENST00000558314 ZNF554Q86TJ5 538 aa12.1□□□□□ -0.47
TPM1-211ENST00000558314 ZNF491Q8N8L2 437 aa12.1□□□□□ -0.47
TPM1-211ENST00000558314 KCNG3Q8TAE7 436 aa12.1□□□□□ -0.47
TPM1-211ENST00000558314 ABHD14BQ96IU4 210 aa12.1□□□□□ -0.47
TPM1-211ENST00000558314 HDHD3Q9BSH5 251 aaPredicted RBP12.1□□□□□ -0.47
TPM1-211ENST00000558314 PARP12Q9H0J9 701 aaKnown RBP12.1□□□□□ -0.47
TPM1-211ENST00000558314 IFI27L2Q9H2X8 130 aa12.1□□□□□ -0.47
TPM1-211ENST00000558314 PLGRKTQ9HBL7 147 aa12.1□□□□□ -0.47
TPM1-211ENST00000558314 SLC23A1Q9UHI7 598 aa12.1□□□□□ -0.47
TPM1-211ENST00000558314 RNF150Q9ULK6 438 aa12.1□□□□□ -0.47
TPM1-211ENST00000558314 LRRC42Q9Y546 428 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms