RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 MRGPRDQ8TDS7 321 aa6.86□□□□□ -1.31
RTF1-205ENST00000558298 PYGO2Q9BRQ0 406 aa6.86□□□□□ -1.31
RTF1-205ENST00000558298 PCGF1Q9BSM1 259 aa6.86□□□□□ -1.31
RTF1-205ENST00000558298 TMEM204Q9BSN7 226 aa6.86□□□□□ -1.31
RTF1-205ENST00000558298 PRO1933Q9H354 126 aa6.86□□□□□ -1.31
RTF1-205ENST00000558298 Q9N2K0 584 aa6.86□□□□□ -1.31
RTF1-205ENST00000558298 DECR2Q9NUI1 292 aa6.86□□□□□ -1.31
RTF1-205ENST00000558298 CISD1Q9NZ45 108 aaKnown RBP6.86□□□□□ -1.31
RTF1-205ENST00000558298 GSKIPQ9P0R6 139 aa6.86□□□□□ -1.31
RTF1-205ENST00000558298 ROS1P08922 2347 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 A0A1B0GU03 582 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 CRYM-AS1A6NIL9 109 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 TMEM14DPA8MWL7 114 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 DEFB108AA8MXU0 73 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 NDUFS8O00217 210 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 SCAF4O95104 1147 aaKnown RBP6.85□□□□□ -1.31
RTF1-205ENST00000558298 TYMSP04818 313 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 CSN2P05814 226 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 OR13C7P0DN81 318 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 CD99P14209 185 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 LOXP28300 417 aaPredicted RBP6.85□□□□□ -1.31
RTF1-205ENST00000558298 ALDH3B1P43353 468 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 DAP3P51398 398 aaKnown RBP6.85□□□□□ -1.31
RTF1-205ENST00000558298 KLF3P57682 345 aaPredicted RBP6.85□□□□□ -1.31
RTF1-205ENST00000558298 UBE2NP61088 152 aaKnown RBP6.85□□□□□ -1.31
RTF1-205ENST00000558298 HERPUD1Q15011 391 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 MEP1BQ16820 701 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 MPV17LQ2QL34 196 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 TSPO2Q5TGU0 170 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 KLHL24Q6TFL4 600 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 SSX7Q7RTT5 188 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 AAED1Q7RTV5 226 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 DPY19L4Q7Z388 723 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 LYPD6Q86Y78 171 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 C20orf196Q8IYI0 205 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 ZNF100Q8IYN0 542 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 LGI3Q8N145 548 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 LRRC75AQ8NAA5 344 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 OR13C9Q8NGT0 318 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 NEK7Q8TDX7 302 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 DTD1Q8TEA8 209 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 TMEM170AQ8WVE7 144 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 NINJ1Q92982 152 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 MRGPRFQ96AM1 343 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 ZNF2Q9BSG1 426 aaPredicted RBP6.85□□□□□ -1.31
RTF1-205ENST00000558298 C20orf24Q9BUV8 137 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 MRPL13Q9BYD1 178 aaKnown RBP6.85□□□□□ -1.31
RTF1-205ENST00000558298 TTTY10Q9BZA0 68 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 C12orf49Q9H741 205 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 SLC7A10Q9NS82 523 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 TAS2R4Q9NYW5 299 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 PRSS50Q9UI38 385 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 AKAP6Q13023 2319 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 HIVEP1P15822 2718 aa6.85□□□□□ -1.31
RTF1-205ENST00000558298 ZNF469Q96JG9 3925 aaPredicted RBP6.84□□□□□ -1.31
RTF1-205ENST00000558298 TRAV9-1A0A075B6T8 112 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 LOC107986453A0A1B0GWG9 222 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 A0A1W2PPR1 153 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 C20orf202A1L168 122 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 XKRY2A2RUG3 117 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 ZNF705GA8MUZ8 300 aaPredicted RBP6.84□□□□□ -1.31
RTF1-205ENST00000558298 SOX15O60248 233 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 VENTXO95231 258 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 AMBPP02760 352 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 THBDP07204 575 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 PGA4P0DJD7 388 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 PGA3P0DJD8 388 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 ZNF823P16415 610 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 ZNF20P17024 532 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 SERPINA2P20848 420 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 GNALP38405 381 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 CDKN2AP42771 156 aaKnown RBP6.84□□□□□ -1.31
RTF1-205ENST00000558298 CDKN1BP46527 198 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 RND3P61587 244 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 RPL23AP62750 156 aaKnown RBP6.84□□□□□ -1.31
RTF1-205ENST00000558298 VAMP2P63027 116 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 SUPT4H1P63272 117 aaKnown RBP6.84□□□□□ -1.31
RTF1-205ENST00000558298 QRFPP83859 136 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 POU3F1Q03052 451 aaPredicted RBP6.84□□□□□ -1.31
RTF1-205ENST00000558298 RPL18Q07020 188 aaKnown RBP6.84□□□□□ -1.31
RTF1-205ENST00000558298 SLC9A3R2Q15599 337 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 GABRA6Q16445 453 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 ANKRD55Q3KP44 614 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 C10orf128Q5T292 105 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 BHLHA15Q7RTS1 189 aaPredicted RBP6.84□□□□□ -1.31
RTF1-205ENST00000558298 CXorf67Q86X51 503 aaPredicted RBP6.84□□□□□ -1.31
RTF1-205ENST00000558298 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.84□□□□□ -1.31
RTF1-205ENST00000558298 MRPL41Q8IXM3 137 aaKnown RBP6.84□□□□□ -1.31
RTF1-205ENST00000558298 C10orf53Q8N6V4 93 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 OR4S1Q8NGB4 309 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 OR2G3Q8NGZ4 309 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 SVIPQ8NHG7 77 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 ORAOV1Q8WV07 137 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 ASB10Q8WXI3 467 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 FRZBQ92765 325 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 TMEM54Q969K7 222 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 TMEM230Q96A57 120 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 PINX1Q96BK5 328 aaKnown RBP6.84□□□□□ -1.31
RTF1-205ENST00000558298 RASD2Q96D21 266 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 OR10C1Q96KK4 312 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms