RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 TMEM88Q6PEY1 159 aa8.86□□□□□ -0.99
TPM1-210ENST00000558264 MOGAT3Q86VF5 341 aa8.86□□□□□ -0.99
TPM1-210ENST00000558264 TMEM252Q8N6L7 170 aa8.86□□□□□ -0.99
TPM1-210ENST00000558264 OR5C1Q8NGR4 320 aa8.86□□□□□ -0.99
TPM1-210ENST00000558264 RBMXL1Q96E39 390 aaKnown RBP8.86□□□□□ -0.99
TPM1-210ENST00000558264 C5orf30Q96GV9 206 aa8.86□□□□□ -0.99
TPM1-210ENST00000558264 OR2V2Q96R30 315 aa8.86□□□□□ -0.99
TPM1-210ENST00000558264 TLNRD1Q9H1K6 362 aa8.86□□□□□ -0.99
TPM1-210ENST00000558264 C11orf1Q9H5F2 150 aa8.86□□□□□ -0.99
TPM1-210ENST00000558264 WIPI2Q9Y4P8 454 aa8.86□□□□□ -0.99
TPM1-210ENST00000558264 KALRNO60229 2985 aa8.86□□□□□ -0.99
TPM1-210ENST00000558264 RAB19A4D1S5 217 aa8.85□□□□□ -0.99
TPM1-210ENST00000558264 MKRN2OSH3BPM6 223 aa8.85□□□□□ -0.99
TPM1-210ENST00000558264 IGKV1-5P01602 117 aa8.85□□□□□ -0.99
TPM1-210ENST00000558264 CRYAAP02489 173 aa8.85□□□□□ -0.99
TPM1-210ENST00000558264 SELLP14151 372 aa8.85□□□□□ -0.99
TPM1-210ENST00000558264 ATF4P18848 351 aaPredicted RBP8.85□□□□□ -0.99
TPM1-210ENST00000558264 PVALBP20472 110 aaPredicted RBP8.85□□□□□ -0.99
TPM1-210ENST00000558264 CD80P33681 288 aa8.85□□□□□ -0.99
TPM1-210ENST00000558264 DYNLT3P51808 116 aa8.85□□□□□ -0.99
TPM1-210ENST00000558264 ZNF816Q0VGE8 651 aaPredicted RBP8.85□□□□□ -0.99
TPM1-210ENST00000558264 MIDNQ504T8 468 aa8.85□□□□□ -0.99
TPM1-210ENST00000558264 ZNF585BQ52M93 769 aa8.85□□□□□ -0.99
TPM1-210ENST00000558264 GPR157Q5UAW9 335 aa8.85□□□□□ -0.99
TPM1-210ENST00000558264 GALMQ96C23 342 aa8.85□□□□□ -0.99
TPM1-210ENST00000558264 MUCL1Q96DR8 90 aa8.85□□□□□ -0.99
TPM1-210ENST00000558264 ABHD14BQ96IU4 210 aa8.85□□□□□ -0.99
TPM1-210ENST00000558264 ABHD14AQ9BUJ0 271 aa8.85□□□□□ -0.99
TPM1-210ENST00000558264 GLS2Q9UI32 602 aa8.85□□□□□ -0.99
TPM1-210ENST00000558264 CRYABP02511 175 aaKnown RBP8.85□□□□□ -0.99
TPM1-210ENST00000558264 RPL30P62888 115 aaKnown RBP8.85□□□□□ -0.99
TPM1-210ENST00000558264 ID3Q02535 119 aa8.85□□□□□ -0.99
TPM1-210ENST00000558264 SMIM21Q3B7S5 101 aa8.85□□□□□ -0.99
TPM1-210ENST00000558264 AKIRIN2Q53H80 203 aa8.85□□□□□ -0.99
TPM1-210ENST00000558264 PUSL1Q8N0Z8 303 aaKnown RBP8.85□□□□□ -0.99
TPM1-210ENST00000558264 ZNRF1Q8ND25 227 aa8.85□□□□□ -0.99
TPM1-210ENST00000558264 SCNM1Q9BWG6 230 aa8.85□□□□□ -0.99
TPM1-210ENST00000558264 ST8SIA5O15466 376 aa8.84□□□□□ -0.99
TPM1-210ENST00000558264 ATG12O94817 140 aa8.84□□□□□ -0.99
TPM1-210ENST00000558264 CAMLGP49069 296 aa8.84□□□□□ -0.99
TPM1-210ENST00000558264 PAX9P55771 341 aa8.84□□□□□ -0.99
TPM1-210ENST00000558264 HNF4GQ14541 408 aa8.84□□□□□ -0.99
TPM1-210ENST00000558264 TIMM23BQ5SRD1 257 aa8.84□□□□□ -0.99
TPM1-210ENST00000558264 SHEQ5VZ18 495 aa8.84□□□□□ -0.99
TPM1-210ENST00000558264 BTNL8Q6UX41 500 aa8.84□□□□□ -0.99
TPM1-210ENST00000558264 TGIF2LYQ8IUE0 185 aa8.84□□□□□ -0.99
TPM1-210ENST00000558264 NKX6-2Q9C056 277 aaPredicted RBP8.84□□□□□ -0.99
TPM1-210ENST00000558264 LYRM2Q9NU23 88 aaPredicted RBP8.84□□□□□ -0.99
TPM1-210ENST00000558264 ZFP57Q9NU63 452 aa8.84□□□□□ -0.99
TPM1-210ENST00000558264 UQCC1Q9NVA1 299 aa8.84□□□□□ -0.99
TPM1-210ENST00000558264 IGKV1D-17A0A075B6S4 117 aa8.84□□□□□ -0.99
TPM1-210ENST00000558264 NPIPB11E5RHQ5 1161 aa8.84□□□□□ -0.99
TPM1-210ENST00000558264 KRASP01116 189 aa8.84□□□□□ -0.99
TPM1-210ENST00000558264 SPP1P10451 314 aa8.84□□□□□ -0.99
TPM1-210ENST00000558264 LMO1P25800 156 aa8.84□□□□□ -0.99
TPM1-210ENST00000558264 PRDX2P32119 198 aa8.84□□□□□ -0.99
TPM1-210ENST00000558264 DUX4L9Q6RFH8 374 aaPredicted RBP8.84□□□□□ -0.99
TPM1-210ENST00000558264 UQCC3Q6UW78 93 aa8.84□□□□□ -0.99
TPM1-210ENST00000558264 ZNF295-AS1Q8N0V1 137 aa8.84□□□□□ -0.99
TPM1-210ENST00000558264 FAM213BQ8TBF2 198 aa8.84□□□□□ -0.99
TPM1-210ENST00000558264 FAM57AQ8TBR7 257 aa8.84□□□□□ -0.99
TPM1-210ENST00000558264 ITLN1Q8WWA0 313 aa8.84□□□□□ -0.99
TPM1-210ENST00000558264 SAT2Q96F10 170 aaPredicted RBP8.84□□□□□ -0.99
TPM1-210ENST00000558264 PLEKHF2Q9H8W4 249 aa8.84□□□□□ -0.99
TPM1-210ENST00000558264 FAM212BQ9NTI7 297 aaPredicted RBP8.84□□□□□ -0.99
TPM1-210ENST00000558264 RNF115Q9Y4L5 304 aa8.84□□□□□ -0.99
TPM1-210ENST00000558264 USF3Q68DE3 2245 aa8.83□□□□□ -1
TPM1-210ENST00000558264 C1QTNF9BB2RNN3 333 aa8.83□□□□□ -1
TPM1-210ENST00000558264 ATXN7O15265 892 aaPredicted RBP8.83□□□□□ -1
TPM1-210ENST00000558264 TXNL1O43396 289 aa8.83□□□□□ -1
TPM1-210ENST00000558264 ATP6V0CP27449 155 aa8.83□□□□□ -1
TPM1-210ENST00000558264 CCKARP32238 428 aa8.83□□□□□ -1
TPM1-210ENST00000558264 EDDM3BP56851 147 aa8.83□□□□□ -1
TPM1-210ENST00000558264 KLF3P57682 345 aaPredicted RBP8.83□□□□□ -1
TPM1-210ENST00000558264 ZNF273Q14593 569 aa8.83□□□□□ -1
TPM1-210ENST00000558264 DOLPP1Q86YN1 238 aa8.83□□□□□ -1
TPM1-210ENST00000558264 SPACA3Q8IXA5 215 aa8.83□□□□□ -1
TPM1-210ENST00000558264 GCSAMQ8N6F7 178 aa8.83□□□□□ -1
TPM1-210ENST00000558264 DEFB108BQ8NET1 73 aa8.83□□□□□ -1
TPM1-210ENST00000558264 NINJ1Q92982 152 aa8.83□□□□□ -1
TPM1-210ENST00000558264 GINS3Q9BRX5 216 aa8.83□□□□□ -1
TPM1-210ENST00000558264 MRPL37Q9BZE1 423 aaKnown RBP8.83□□□□□ -1
TPM1-210ENST00000558264 FAM234AQ9H0X4 552 aa8.83□□□□□ -1
TPM1-210ENST00000558264 OOEPA6NGQ2 149 aa8.83□□□□□ -1
TPM1-210ENST00000558264 RNASEK-C17orf49H0YIS7 233 aa8.83□□□□□ -1
TPM1-210ENST00000558264 DNASE2O00115 360 aaPredicted RBP8.83□□□□□ -1
TPM1-210ENST00000558264 TSPAN15O95858 294 aa8.83□□□□□ -1
TPM1-210ENST00000558264 G6PCP35575 357 aa8.83□□□□□ -1
TPM1-210ENST00000558264 RPS16P62249 146 aaKnown RBP8.83□□□□□ -1
TPM1-210ENST00000558264 UTF1Q5T230 341 aa8.83□□□□□ -1
TPM1-210ENST00000558264 SLC35E4Q6ICL7 350 aa8.83□□□□□ -1
TPM1-210ENST00000558264 IL34Q6ZMJ4 242 aa8.83□□□□□ -1
TPM1-210ENST00000558264 CBLN2Q8IUK8 224 aa8.83□□□□□ -1
TPM1-210ENST00000558264 ZCCHC24Q8N2G6 241 aaKnown RBP8.83□□□□□ -1
TPM1-210ENST00000558264 Q8NA96 180 aa8.83□□□□□ -1
TPM1-210ENST00000558264 COL25A1Q9BXS0 654 aaPredicted RBP8.83□□□□□ -1
TPM1-210ENST00000558264 ARV1Q9H2C2 271 aa8.83□□□□□ -1
TPM1-210ENST00000558264 DCAF16Q9NXF7 216 aa8.83□□□□□ -1
TPM1-210ENST00000558264 PSG11Q9UQ72 335 aa8.83□□□□□ -1
TPM1-210ENST00000558264 A0A0G2JNJ9 132 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms