RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 OR5M8Q8NGP6 311 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 OR8U1Q8NH10 309 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 NIPSNAP1Q9BPW8 284 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 MROQ9BYG7 248 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 ZNF286AQ9HBT8 521 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 COPS3Q9UNS2 423 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 SMAD5-AS1Q9Y6J3 95 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 V9GYS6 101 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 TRGV10A0A0A0MS01 117 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 A0A1B0GTI1 187 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 FAM90A10PA6NDY2 464 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 LINC01548A6NM66 108 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 OOSP1A8MZH6 123 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 HSBP1L1C9JCN9 74 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 H3BN98 237 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 TOR1AO14656 332 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 MGST3O14880 152 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 SRSF10O75494 262 aaKnown RBP4.57□□□□□ -1.68
VPS33B-207ENST00000557470 KDM4BO94953 1096 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 SPDEFO95238 335 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 MRPL3P09001 348 aaKnown RBP4.57□□□□□ -1.68
VPS33B-207ENST00000557470 FAM106CPP0CH98 169 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 SLC2A5P22732 501 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 CD34P28906 385 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 ERP29P30040 261 aaKnown RBP4.57□□□□□ -1.68
VPS33B-207ENST00000557470 CEACAM3P40198 252 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 MNDAP41218 407 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 RIDAP52758 137 aaKnown RBP4.57□□□□□ -1.68
VPS33B-207ENST00000557470 SLC35B1P78383 322 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 ZNF91Q05481 1191 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 MED21Q13503 144 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 IL18Q14116 193 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 ZNF260Q3ZCT1 412 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 BCL2L15Q5TBC7 163 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 LCE5AQ5TCM9 118 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 OR52W1Q6IF63 320 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 DEGS2Q6QHC5 323 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 PLEKHG7Q6ZR37 379 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 SLC25A26Q70HW3 274 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 MEPCEQ7L2J0 689 aaKnown RBP4.57□□□□□ -1.68
VPS33B-207ENST00000557470 SLC35E3Q7Z769 313 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 STPG2Q8N412 459 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 DRAM1Q8N682 238 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 OR10G2Q8NGC3 310 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 OR56B4Q8NH76 319 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 EMG1Q92979 244 aaKnown RBP4.57□□□□□ -1.68
VPS33B-207ENST00000557470 TOMM40LQ969M1 308 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 CREB3L1Q96BA8 519 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 CMTM5Q96DZ9 223 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 SLC29A1Q99808 456 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 FAM110AQ9BQ89 295 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 KRTAP9-3Q9BYQ3 159 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 GAL3ST2Q9H3Q3 398 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 RBFOX1Q9NWB1 397 aaKnown RBP4.57□□□□□ -1.68
VPS33B-207ENST00000557470 IKZF2Q9UKS7 526 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 RNF150Q9ULK6 438 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 SLC7A11Q9UPY5 501 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 ERGIC3Q9Y282 383 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 SAMHD1Q9Y3Z3 626 aaKnown RBP4.57□□□□□ -1.68
VPS33B-207ENST00000557470 DNAH1Q9P2D7 4330 aa4.57□□□□□ -1.68
VPS33B-207ENST00000557470 HUWE1Q7Z6Z7 4374 aaKnown RBP4.57□□□□□ -1.68
VPS33B-207ENST00000557470 HYDINQ4G0P3 5121 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 A0A1W2PPI3 338 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 A0A1W2PPQ1 181 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 CCDC182A6NF36 153 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 CCDC160A6NGH7 325 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 DHRS7CA6NNS2 312 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 LOC110117498-PIK3R3F6TDL0 507 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 H3BSH0 61 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 AP4M1O00189 453 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 SIRPB1O00241 398 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 MAGEB4O15481 346 aaPredicted RBP4.56□□□□□ -1.68
VPS33B-207ENST00000557470 FGF16O43320 207 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 ENTPD6O75354 484 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 IGHG2P01859 326 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 FRMD6-AS1P0C7T7 363 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 ATP6V1B2P21281 511 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 CCL1P22362 96 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 TALDO1P37837 337 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 CDX1P47902 265 aaPredicted RBP4.56□□□□□ -1.68
VPS33B-207ENST00000557470 GLIPR1P48060 266 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 NPBWR2P48146 333 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 DLK1P80370 383 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 APOFQ13790 326 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 DIAPH2-AS1Q14236 149 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 HES1Q14469 280 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 HNF4GQ14541 408 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 GINS1Q14691 196 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 KIR2DS1Q14954 304 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 ZNF146Q15072 292 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 UBE2V2Q15819 145 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 TRIM16LQ309B1 348 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 KIAA2026Q5HYC2 2103 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 PLAC9Q5JTB6 97 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 SLC35D3Q5M8T2 416 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 OR2T5Q6IEZ7 315 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 Q6ZSR3 168 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 NOXA1Q86UR1 476 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 FOXRED2Q8IWF2 684 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 Q8IYB0 196 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms