RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 IGSF11Q5DX21 431 aa11.98□□□□□ -0.49
VIPAS39-210ENST00000557466 LAX1Q8IWV1 398 aa11.98□□□□□ -0.49
VIPAS39-210ENST00000557466 TOMM40LQ969M1 308 aa11.98□□□□□ -0.49
VIPAS39-210ENST00000557466 OCSTAMPQ9BR26 566 aa11.98□□□□□ -0.49
VIPAS39-210ENST00000557466 DCUN1D5Q9BTE7 237 aa11.98□□□□□ -0.49
VIPAS39-210ENST00000557466 ABHD14AQ9BUJ0 271 aa11.98□□□□□ -0.49
VIPAS39-210ENST00000557466 ST6GALNAC5Q9BVH7 336 aa11.98□□□□□ -0.49
VIPAS39-210ENST00000557466 DPAGT1Q9H3H5 408 aa11.98□□□□□ -0.49
VIPAS39-210ENST00000557466 SMIM31A0A1B0GVY4 71 aa11.97□□□□□ -0.49
VIPAS39-210ENST00000557466 DPPA5A6NC42 116 aa11.97□□□□□ -0.49
VIPAS39-210ENST00000557466 BTBD17A6NE02 478 aa11.97□□□□□ -0.49
VIPAS39-210ENST00000557466 VGLL3A8MV65 326 aa11.97□□□□□ -0.49
VIPAS39-210ENST00000557466 RGS5O15539 181 aa11.97□□□□□ -0.49
VIPAS39-210ENST00000557466 RGS11O94810 467 aa11.97□□□□□ -0.49
VIPAS39-210ENST00000557466 HLA-DQB1P01920 261 aa11.97□□□□□ -0.49
VIPAS39-210ENST00000557466 ZBTB25P24278 435 aa11.97□□□□□ -0.49
VIPAS39-210ENST00000557466 LY6G6FQ5SQ64 297 aa11.97□□□□□ -0.49
VIPAS39-210ENST00000557466 FOXB2Q5VYV0 432 aa11.97□□□□□ -0.49
VIPAS39-210ENST00000557466 GVQW1Q8N7I0 195 aa11.97□□□□□ -0.49
VIPAS39-210ENST00000557466 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.97□□□□□ -0.49
VIPAS39-210ENST00000557466 OR5R1Q8NH85 324 aa11.97□□□□□ -0.49
VIPAS39-210ENST00000557466 RPEQ96AT9 228 aa11.97□□□□□ -0.49
VIPAS39-210ENST00000557466 EXTL2Q9UBQ6 330 aa11.97□□□□□ -0.49
VIPAS39-210ENST00000557466 VPREB3Q9UKI3 123 aa11.97□□□□□ -0.49
VIPAS39-210ENST00000557466 A0A1W2PPI3 338 aa11.96□□□□□ -0.49
VIPAS39-210ENST00000557466 MEIS3P1A6NDR6 274 aa11.96□□□□□ -0.49
VIPAS39-210ENST00000557466 OOSP1A8MZH6 123 aa11.96□□□□□ -0.49
VIPAS39-210ENST00000557466 HSD17B6O14756 317 aa11.96□□□□□ -0.49
VIPAS39-210ENST00000557466 BET1O15155 118 aa11.96□□□□□ -0.49
VIPAS39-210ENST00000557466 ST8SIA5O15466 376 aa11.96□□□□□ -0.49
VIPAS39-210ENST00000557466 HSPA12AO43301 675 aa11.96□□□□□ -0.49
VIPAS39-210ENST00000557466 IL3RAP26951 378 aa11.96□□□□□ -0.49
VIPAS39-210ENST00000557466 RAB13P51153 203 aa11.96□□□□□ -0.49
VIPAS39-210ENST00000557466 DYNLT3P51808 116 aa11.96□□□□□ -0.49
VIPAS39-210ENST00000557466 ZNF137PP52743 207 aa11.96□□□□□ -0.49
VIPAS39-210ENST00000557466 LY6EQ16553 131 aa11.96□□□□□ -0.49
VIPAS39-210ENST00000557466 KRTAP21-3Q3LHN1 58 aa11.96□□□□□ -0.49
VIPAS39-210ENST00000557466 SNX29P2Q8IUI4 249 aa11.96□□□□□ -0.49
VIPAS39-210ENST00000557466 OR2AK2Q8NG84 335 aa11.96□□□□□ -0.49
VIPAS39-210ENST00000557466 PIFOQ8TCI5 191 aa11.96□□□□□ -0.49
VIPAS39-210ENST00000557466 ZFAND2BQ8WV99 257 aa11.96□□□□□ -0.49
VIPAS39-210ENST00000557466 ST6GALNAC6Q969X2 333 aa11.96□□□□□ -0.49
VIPAS39-210ENST00000557466 C6orf62Q9GZU0 229 aaPredicted RBP11.96□□□□□ -0.49
VIPAS39-210ENST00000557466 NXF2Q9GZY0 626 aaKnown RBP11.96□□□□□ -0.49
VIPAS39-210ENST00000557466 IFI27L2Q9H2X8 130 aa11.96□□□□□ -0.49
VIPAS39-210ENST00000557466 ABCB10Q9NRK6 738 aa11.96□□□□□ -0.49
VIPAS39-210ENST00000557466 MRPS7Q9Y2R9 242 aaKnown RBP11.96□□□□□ -0.49
VIPAS39-210ENST00000557466 TRBV6-7A0A0A0MS04 114 aa11.95□□□□□ -0.5
VIPAS39-210ENST00000557466 GPR137BO60478 399 aa11.95□□□□□ -0.5
VIPAS39-210ENST00000557466 DIRAS3O95661 229 aa11.95□□□□□ -0.5
VIPAS39-210ENST00000557466 FCER2P06734 321 aa11.95□□□□□ -0.5
VIPAS39-210ENST00000557466 CEACAM6P40199 344 aa11.95□□□□□ -0.5
VIPAS39-210ENST00000557466 REG1BP48304 166 aa11.95□□□□□ -0.5
VIPAS39-210ENST00000557466 ZNF816Q0VGE8 651 aaPredicted RBP11.95□□□□□ -0.5
VIPAS39-210ENST00000557466 FBLN7Q53RD9 439 aa11.95□□□□□ -0.5
VIPAS39-210ENST00000557466 C16orf87Q6PH81 154 aa11.95□□□□□ -0.5
VIPAS39-210ENST00000557466 CNIH2Q6PI25 160 aa11.95□□□□□ -0.5
VIPAS39-210ENST00000557466 HOGA1Q86XE5 327 aa11.95□□□□□ -0.5
VIPAS39-210ENST00000557466 ODF3L1Q8IXM7 274 aa11.95□□□□□ -0.5
VIPAS39-210ENST00000557466 LYG1Q8N1E2 194 aa11.95□□□□□ -0.5
VIPAS39-210ENST00000557466 BEST4Q8NFU0 473 aa11.95□□□□□ -0.5
VIPAS39-210ENST00000557466 MCFD2Q8NI22 146 aa11.95□□□□□ -0.5
VIPAS39-210ENST00000557466 FAM216AQ8WUB2 273 aa11.95□□□□□ -0.5
VIPAS39-210ENST00000557466 C11orf54Q9H0W9 315 aaPredicted RBP11.95□□□□□ -0.5
VIPAS39-210ENST00000557466 RDH8Q9NYR8 311 aa11.95□□□□□ -0.5
VIPAS39-210ENST00000557466 ANXA10Q9UJ72 324 aa11.95□□□□□ -0.5
VIPAS39-210ENST00000557466 ADAM30Q9UKF2 790 aa11.95□□□□□ -0.5
VIPAS39-210ENST00000557466 ITGB1BP1O14713 200 aa11.94□□□□□ -0.5
VIPAS39-210ENST00000557466 TIMM23O14925 209 aa11.94□□□□□ -0.5
VIPAS39-210ENST00000557466 PRSS3P35030 304 aa11.94□□□□□ -0.5
VIPAS39-210ENST00000557466 CBX5P45973 191 aa11.94□□□□□ -0.5
VIPAS39-210ENST00000557466 RAB7AP51149 207 aa11.94□□□□□ -0.5
VIPAS39-210ENST00000557466 ARHGDIBP52566 201 aa11.94□□□□□ -0.5
VIPAS39-210ENST00000557466 CCDC144NLQ6NUI1 221 aa11.94□□□□□ -0.5
VIPAS39-210ENST00000557466 OR8H3Q8N146 312 aa11.94□□□□□ -0.5
VIPAS39-210ENST00000557466 OR10J5Q8NHC4 309 aa11.94□□□□□ -0.5
VIPAS39-210ENST00000557466 EDARADDQ8WWZ3 215 aa11.94□□□□□ -0.5
VIPAS39-210ENST00000557466 TMEM158Q8WZ71 300 aa11.94□□□□□ -0.5
VIPAS39-210ENST00000557466 CFHR4Q92496 578 aa11.94□□□□□ -0.5
VIPAS39-210ENST00000557466 TAF15Q92804 592 aaKnown RBP eCLIP11.94□□□□□ -0.5
VIPAS39-210ENST00000557466 SNAPC3Q92966 411 aa11.94□□□□□ -0.5
VIPAS39-210ENST00000557466 C19orf24Q9BVV8 132 aa11.94□□□□□ -0.5
VIPAS39-210ENST00000557466 TOLLIPQ9H0E2 274 aa11.94□□□□□ -0.5
VIPAS39-210ENST00000557466 IFT46Q9NQC8 304 aa11.94□□□□□ -0.5
VIPAS39-210ENST00000557466 NDUFA13Q9P0J0 144 aa11.94□□□□□ -0.5
VIPAS39-210ENST00000557466 ANAPC10Q9UM13 185 aa11.94□□□□□ -0.5
VIPAS39-210ENST00000557466 TCF19Q9Y242 345 aa11.94□□□□□ -0.5
VIPAS39-210ENST00000557466 SAA2-SAA4A0A096LPE2 208 aa11.93□□□□□ -0.5
VIPAS39-210ENST00000557466 IGHV1-3A0A0C4DH29 117 aa11.93□□□□□ -0.5
VIPAS39-210ENST00000557466 A6NDX4 124 aa11.93□□□□□ -0.5
VIPAS39-210ENST00000557466 FAM181BA6NEQ2 426 aa11.93□□□□□ -0.5
VIPAS39-210ENST00000557466 RNF212BA8MTL3 300 aa11.93□□□□□ -0.5
VIPAS39-210ENST00000557466 CHST1O43916 411 aa11.93□□□□□ -0.5
VIPAS39-210ENST00000557466 GAPDHP04406 335 aaKnown RBP11.93□□□□□ -0.5
VIPAS39-210ENST00000557466 SAA2P0DJI9 122 aaPredicted RBP11.93□□□□□ -0.5
VIPAS39-210ENST00000557466 CD24P25063 80 aa11.93□□□□□ -0.5
VIPAS39-210ENST00000557466 BRS3P32247 399 aa11.93□□□□□ -0.5
VIPAS39-210ENST00000557466 OR3A3P47888 321 aa11.93□□□□□ -0.5
VIPAS39-210ENST00000557466 RNASE12Q5GAN4 147 aaKnown RBP11.93□□□□□ -0.5
VIPAS39-210ENST00000557466 H1FOOQ8IZA3 346 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms