RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 ZNF251Q9BRH9 671 aa10.87□□□□□ -0.67
SLIRP-210ENST00000557431 FAM103A1Q9BTL3 118 aaKnown RBP10.87□□□□□ -0.67
SLIRP-210ENST00000557431 ABHD14AQ9BUJ0 271 aa10.87□□□□□ -0.67
SLIRP-210ENST00000557431 FBXL15Q9H469 300 aa10.87□□□□□ -0.67
SLIRP-210ENST00000557431 OR2S2Q9NQN1 319 aa10.87□□□□□ -0.67
SLIRP-210ENST00000557431 MRPS28Q9Y2Q9 187 aaKnown RBP10.87□□□□□ -0.67
SLIRP-210ENST00000557431 BIRC6Q9NR09 4857 aa10.87□□□□□ -0.67
SLIRP-210ENST00000557431 HYDINQ4G0P3 5121 aa10.86□□□□□ -0.67
SLIRP-210ENST00000557431 PNMA8CA0A1B0GUJ8 204 aa10.86□□□□□ -0.67
SLIRP-210ENST00000557431 FAM90A10PA6NDY2 464 aa10.86□□□□□ -0.67
SLIRP-210ENST00000557431 LINC01619G3V211 115 aa10.86□□□□□ -0.67
SLIRP-210ENST00000557431 WBP4O75554 376 aaKnown RBP10.86□□□□□ -0.67
SLIRP-210ENST00000557431 Q3ZCU0 254 aa10.86□□□□□ -0.67
SLIRP-210ENST00000557431 C6orf183Q5T699 404 aa10.86□□□□□ -0.67
SLIRP-210ENST00000557431 OGFRL1Q5TC84 451 aaPredicted RBP10.86□□□□□ -0.67
SLIRP-210ENST00000557431 TTC23Q5W5X9 447 aa10.86□□□□□ -0.67
SLIRP-210ENST00000557431 SIGIRRQ6IA17 410 aa10.86□□□□□ -0.67
SLIRP-210ENST00000557431 RPL22L1Q6P5R6 122 aaKnown RBP10.86□□□□□ -0.67
SLIRP-210ENST00000557431 JAGN1Q8N5M9 183 aa10.86□□□□□ -0.67
SLIRP-210ENST00000557431 ABHD5Q8WTS1 349 aa10.86□□□□□ -0.67
SLIRP-210ENST00000557431 MS4A10Q96PG2 267 aa10.86□□□□□ -0.67
SLIRP-210ENST00000557431 SELENOIQ9C0D9 397 aa10.86□□□□□ -0.67
SLIRP-210ENST00000557431 TOLLIPQ9H0E2 274 aa10.86□□□□□ -0.67
SLIRP-210ENST00000557431 ZMAT4Q9H898 229 aa10.86□□□□□ -0.67
SLIRP-210ENST00000557431 TPSG1Q9NRR2 321 aa10.86□□□□□ -0.67
SLIRP-210ENST00000557431 MRPS18AQ9NVS2 196 aaKnown RBP10.86□□□□□ -0.67
SLIRP-210ENST00000557431 CLEC2DQ9UHP7 191 aa10.86□□□□□ -0.67
SLIRP-210ENST00000557431 ZNF580Q9UK33 172 aa10.86□□□□□ -0.67
SLIRP-210ENST00000557431 GAB2Q9UQC2 676 aa10.86□□□□□ -0.67
SLIRP-210ENST00000557431 RPL36Q9Y3U8 105 aaKnown RBP10.86□□□□□ -0.67
SLIRP-210ENST00000557431 SAA2-SAA4A0A096LPE2 208 aa10.85□□□□□ -0.67
SLIRP-210ENST00000557431 MAS1P04201 325 aa10.85□□□□□ -0.67
SLIRP-210ENST00000557431 SAA2P0DJI9 122 aaPredicted RBP10.85□□□□□ -0.67
SLIRP-210ENST00000557431 C19orf54Q5BKX5 351 aa10.85□□□□□ -0.67
SLIRP-210ENST00000557431 AWAT2Q6E213 333 aa10.85□□□□□ -0.67
SLIRP-210ENST00000557431 ACSM6Q6P461 480 aa10.85□□□□□ -0.67
SLIRP-210ENST00000557431 FAM131AQ6UXB0 335 aa10.85□□□□□ -0.67
SLIRP-210ENST00000557431 DHRSXQ8N5I4 330 aa10.85□□□□□ -0.67
SLIRP-210ENST00000557431 MINDY2Q8NBR6 621 aa10.85□□□□□ -0.67
SLIRP-210ENST00000557431 MRPL30Q8TCC3 161 aaKnown RBP10.85□□□□□ -0.67
SLIRP-210ENST00000557431 CYGBQ8WWM9 190 aa10.85□□□□□ -0.67
SLIRP-210ENST00000557431 FAM46BQ96A09 425 aa10.85□□□□□ -0.67
SLIRP-210ENST00000557431 CITED4Q96RK1 184 aa10.85□□□□□ -0.67
SLIRP-210ENST00000557431 CLCC1Q96S66 551 aa10.85□□□□□ -0.67
SLIRP-210ENST00000557431 MYCBPQ99417 103 aaPredicted RBP10.85□□□□□ -0.67
SLIRP-210ENST00000557431 PAK1IP1Q9NWT1 392 aaPredicted RBP10.85□□□□□ -0.67
SLIRP-210ENST00000557431 TRBV5-5A0A0J9YX44 114 aa10.84□□□□□ -0.67
SLIRP-210ENST00000557431 FCN1O00602 326 aa10.84□□□□□ -0.67
SLIRP-210ENST00000557431 ST8SIA5O15466 376 aa10.84□□□□□ -0.67
SLIRP-210ENST00000557431 CRTAPO75718 401 aaPredicted RBP10.84□□□□□ -0.67
SLIRP-210ENST00000557431 LGALS1P09382 135 aaKnown RBP10.84□□□□□ -0.67
SLIRP-210ENST00000557431 MGMTP16455 207 aa10.84□□□□□ -0.67
SLIRP-210ENST00000557431 RPS11P62280 158 aaKnown RBP eCLIP10.84□□□□□ -0.67
SLIRP-210ENST00000557431 PITPNAQ00169 270 aa10.84□□□□□ -0.67
SLIRP-210ENST00000557431 DEFA5Q01523 94 aa10.84□□□□□ -0.67
SLIRP-210ENST00000557431 RPL39P5Q59GN2 51 aa10.84□□□□□ -0.67
SLIRP-210ENST00000557431 LIN54Q6MZP7 749 aa10.84□□□□□ -0.67
SLIRP-210ENST00000557431 GAPTQ8N292 157 aa10.84□□□□□ -0.67
SLIRP-210ENST00000557431 OR6Q1Q8NGQ2 317 aa10.84□□□□□ -0.67
SLIRP-210ENST00000557431 SMIM19Q96E16 107 aa10.84□□□□□ -0.67
SLIRP-210ENST00000557431 MRPS24Q96EL2 167 aaKnown RBP10.84□□□□□ -0.67
SLIRP-210ENST00000557431 OR14A2Q96R54 314 aa10.84□□□□□ -0.67
SLIRP-210ENST00000557431 RSRP1Q9BUV0 290 aa10.84□□□□□ -0.67
SLIRP-210ENST00000557431 PARP12Q9H0J9 701 aaKnown RBP10.84□□□□□ -0.67
SLIRP-210ENST00000557431 KCNK15Q9H427 330 aa10.84□□□□□ -0.67
SLIRP-210ENST00000557431 FGF20Q9NP95 211 aaPredicted RBP10.84□□□□□ -0.67
SLIRP-210ENST00000557431 KIAA1456Q9P272 454 aa10.84□□□□□ -0.67
SLIRP-210ENST00000557431 OGG1O15527 345 aa10.83□□□□□ -0.68
SLIRP-210ENST00000557431 ZNF780AO75290 641 aaPredicted RBP10.83□□□□□ -0.68
SLIRP-210ENST00000557431 NDUFA3O95167 84 aa10.83□□□□□ -0.68
SLIRP-210ENST00000557431 IGHV4-30-4P0DP06 118 aa10.83□□□□□ -0.68
SLIRP-210ENST00000557431 EGR2P11161 476 aaPredicted RBP10.83□□□□□ -0.68
SLIRP-210ENST00000557431 CX3CL1P78423 397 aa10.83□□□□□ -0.68
SLIRP-210ENST00000557431 DOC2BQ14184 412 aa10.83□□□□□ -0.68
SLIRP-210ENST00000557431 ZNF833PQ6ZTB9 187 aa10.83□□□□□ -0.68
SLIRP-210ENST00000557431 SETD9Q8NE22 299 aa10.83□□□□□ -0.68
SLIRP-210ENST00000557431 GHSRQ92847 366 aa10.83□□□□□ -0.68
SLIRP-210ENST00000557431 Q96M66 194 aa10.83□□□□□ -0.68
SLIRP-210ENST00000557431 TM2D3Q9BRN9 247 aa10.83□□□□□ -0.68
SLIRP-210ENST00000557431 CHCHD6Q9BRQ6 235 aa10.83□□□□□ -0.68
SLIRP-210ENST00000557431 MBNL3Q9NUK0 354 aaKnown RBP10.83□□□□□ -0.68
SLIRP-210ENST00000557431 NKX1-2Q9UD57 310 aaPredicted RBP10.83□□□□□ -0.68
SLIRP-210ENST00000557431 FOXA2Q9Y261 457 aaPredicted RBP10.83□□□□□ -0.68
SLIRP-210ENST00000557431 ERICH4A6NGS2 130 aa10.82□□□□□ -0.68
SLIRP-210ENST00000557431 SC5DO75845 299 aa10.82□□□□□ -0.68
SLIRP-210ENST00000557431 CAPGP40121 348 aa10.82□□□□□ -0.68
SLIRP-210ENST00000557431 TPPP2P59282 170 aa10.82□□□□□ -0.68
SLIRP-210ENST00000557431 PLGLAQ15195 96 aa10.82□□□□□ -0.68
SLIRP-210ENST00000557431 Q499Y3 187 aa10.82□□□□□ -0.68
SLIRP-210ENST00000557431 CCDC58Q4VC31 144 aa10.82□□□□□ -0.68
SLIRP-210ENST00000557431 OR10K2Q6IF99 312 aa10.82□□□□□ -0.68
SLIRP-210ENST00000557431 TRAT1Q6PIZ9 186 aa10.82□□□□□ -0.68
SLIRP-210ENST00000557431 Q8N1Y9 231 aa10.82□□□□□ -0.68
SLIRP-210ENST00000557431 NPBQ8NG41 125 aa10.82□□□□□ -0.68
SLIRP-210ENST00000557431 ABHD14BQ96IU4 210 aa10.82□□□□□ -0.68
SLIRP-210ENST00000557431 PGLYRP3Q96LB9 341 aa10.82□□□□□ -0.68
SLIRP-210ENST00000557431 IFI27L2Q9H2X8 130 aa10.82□□□□□ -0.68
SLIRP-210ENST00000557431 EDA2RQ9HAV5 297 aa10.82□□□□□ -0.68
SLIRP-210ENST00000557431 SPACA1Q9HBV2 294 aa10.82□□□□□ -0.68
SLIRP-210ENST00000557431 KCNIP1Q9NZI2 227 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms