RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 Q6ZSR3 168 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 STX12Q86Y82 276 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 FAM219AQ8IW50 185 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 MCEMP1Q8IX19 187 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 FAM24BQ8N5W8 94 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 ZNF283Q8N7M2 679 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 SLC38A9Q8NBW4 561 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 BHLHE23Q8NDY6 225 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 PLPP5Q8NEB5 264 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 TSTD1Q8NFU3 115 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 OR10S1Q8NGN2 331 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 OR6X1Q8NH79 312 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 RNASE11Q8TAA1 199 aaKnown RBP3.96□□□□□ -1.78
ATXN3-246ENST00000557030 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-246ENST00000557030 MAFIPQ8WZ33 124 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 HAS2Q92819 552 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 TSLPQ969D9 159 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 MRPL24Q96A35 216 aaKnown RBP3.96□□□□□ -1.78
ATXN3-246ENST00000557030 RBMXL1Q96E39 390 aaKnown RBP3.96□□□□□ -1.78
ATXN3-246ENST00000557030 GNPNAT1Q96EK6 184 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-246ENST00000557030 FAM71F1Q96KD3 344 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-246ENST00000557030 ZNF2Q9BSG1 426 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-246ENST00000557030 GGACTQ9BVM4 153 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 SCRT1Q9BWW7 348 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 ANGPTL4Q9BY76 406 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 MRPL13Q9BYD1 178 aaKnown RBP3.96□□□□□ -1.78
ATXN3-246ENST00000557030 SMIM3Q9BZL3 60 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 SLC25A31Q9H0C2 315 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 METTL9Q9H1A3 318 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 BANF2Q9H503 90 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 NAA60Q9H7X0 242 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 ZNF701Q9NV72 531 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-246ENST00000557030 ANXA10Q9UJ72 324 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 LHFPL6Q9Y693 200 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 PTPRZ1P23471 2315 aaPredicted RBP3.95□□□□□ -1.78
ATXN3-246ENST00000557030 IGLV3-32A0A0A0MS00 114 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 IGKV1D-43A0A0B4J1Z2 117 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 TRAV34A0A0B4J273 112 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 A0A1W2PPE3 182 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 A0A1W2PRV1 198 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 A4D1N5 150 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 RBFOX3A6NFN3 312 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 ZNF726A6NNF4 738 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 ZNF850A8MQ14 1090 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 LMO7DNF2Z398 122 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 TSTD3H0UI37 97 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 K7N7A8 449 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 DVL1O14640 695 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 PPP1R2P9O14990 202 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 WDR1O75083 606 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 DHRS3O75911 302 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 PDGFBP01127 241 aaPredicted RBP3.95□□□□□ -1.78
ATXN3-246ENST00000557030 IGLV3-1P01715 115 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 HSPB1P04792 205 aaKnown RBP3.95□□□□□ -1.78
ATXN3-246ENST00000557030 SP1P08047 785 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 PGA4P0DJD7 388 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 PGA3P0DJD8 388 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 ZNF43P17038 809 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 ITGA3P26006 1051 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 MC5RP33032 325 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 TAGLN2P37802 199 aaKnown RBP3.95□□□□□ -1.78
ATXN3-246ENST00000557030 RPS10P46783 165 aaKnown RBP3.95□□□□□ -1.78
ATXN3-246ENST00000557030 MTCP1P56278 107 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 PIGPP57054 158 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 OR1D5P58170 312 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 RAB4BP61018 213 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 UBE2KP61086 200 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 HERV-K104P61576 105 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 RPS23P62266 143 aaKnown RBP3.95□□□□□ -1.78
ATXN3-246ENST00000557030 ACY1Q03154 408 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 TLE4Q04727 773 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 BAXQ07812 192 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 PNRC1Q12796 327 aaPredicted RBP3.95□□□□□ -1.78
ATXN3-246ENST00000557030 RSU1Q15404 277 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 NSDHLQ15738 373 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 ACER2Q5QJU3 275 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 FBXW12Q6X9E4 464 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 SLC35E3Q7Z769 313 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 OR10G4Q8NGN3 311 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 OR1L3Q8NH93 324 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 FAM213BQ8TBF2 198 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 M1APQ8TC57 530 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 RNF138Q8WVD3 245 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 CPNE4Q96A23 557 aaPredicted RBP3.95□□□□□ -1.78
ATXN3-246ENST00000557030 ISOC2Q96AB3 205 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 SPSB1Q96BD6 273 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 MUCL1Q96DR8 90 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 C18orf12Q96KH6 178 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 YPEL4Q96NS1 127 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 OXGR1Q96P68 337 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 IP6K3Q96PC2 410 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 UHRF2Q96PU4 802 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 NIPSNAP3BQ9BS92 247 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 RTN4RQ9BZR6 473 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 BCL2L14Q9BZR8 327 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 CHST5Q9GZS9 411 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 ZNF286AQ9HBT8 521 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 ZNF160Q9HCG1 818 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 UFSP2Q9NUQ7 469 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 PLEKHJ1Q9NW61 149 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms