RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 OPN1MW3P0DN78 364 aa9.66□□□□□ -0.86
SRP54-213ENST00000556994 CD81P60033 236 aa9.66□□□□□ -0.86
SRP54-213ENST00000556994 PKIAP61925 76 aa9.66□□□□□ -0.86
SRP54-213ENST00000556994 COL10A1Q03692 680 aa9.66□□□□□ -0.86
SRP54-213ENST00000556994 RTP5Q14D33 572 aa9.66□□□□□ -0.86
SRP54-213ENST00000556994 ZNF585BQ52M93 769 aa9.66□□□□□ -0.86
SRP54-213ENST00000556994 MRGPRGQ86SM5 289 aa9.66□□□□□ -0.86
SRP54-213ENST00000556994 RPP25LQ8N5L8 163 aaKnown RBP9.66□□□□□ -0.86
SRP54-213ENST00000556994 OR10A7Q8NGE5 316 aa9.66□□□□□ -0.86
SRP54-213ENST00000556994 LHX4Q969G2 390 aa9.66□□□□□ -0.86
SRP54-213ENST00000556994 WDR61Q9GZS3 305 aaKnown RBP9.66□□□□□ -0.86
SRP54-213ENST00000556994 SLC39A9Q9NUM3 307 aa9.66□□□□□ -0.86
SRP54-213ENST00000556994 CFIP05156 583 aa9.66□□□□□ -0.86
SRP54-213ENST00000556994 GZMHP20718 246 aa9.66□□□□□ -0.86
SRP54-213ENST00000556994 TMEM41BQ5BJD5 291 aa9.66□□□□□ -0.86
SRP54-213ENST00000556994 SPATA46Q5T0L3 261 aa9.66□□□□□ -0.86
SRP54-213ENST00000556994 TCEAL6Q6IPX3 200 aa9.66□□□□□ -0.86
SRP54-213ENST00000556994 VASH2Q86V25 355 aa9.66□□□□□ -0.86
SRP54-213ENST00000556994 MED12LQ86YW9 2145 aa9.66□□□□□ -0.86
SRP54-213ENST00000556994 FAM58AQ8N1B3 248 aa9.66□□□□□ -0.86
SRP54-213ENST00000556994 OR5A2Q8NGI9 324 aa9.66□□□□□ -0.86
SRP54-213ENST00000556994 POM121Q96HA1 1249 aa9.66□□□□□ -0.86
SRP54-213ENST00000556994 ELOVL1Q9BW60 279 aa9.66□□□□□ -0.86
SRP54-213ENST00000556994 GPR87Q9BY21 358 aa9.66□□□□□ -0.86
SRP54-213ENST00000556994 PITPNC1Q9UKF7 332 aa9.66□□□□□ -0.86
SRP54-213ENST00000556994 LAMP3Q9UQV4 416 aa9.66□□□□□ -0.86
SRP54-213ENST00000556994 DOCK10Q96BY6 2186 aa9.65□□□□□ -0.86
SRP54-213ENST00000556994 TSTD3H0UI37 97 aa9.65□□□□□ -0.86
SRP54-213ENST00000556994 SIRPB1O00241 398 aa9.65□□□□□ -0.86
SRP54-213ENST00000556994 DEGS1O15121 323 aa9.65□□□□□ -0.86
SRP54-213ENST00000556994 CA6P23280 308 aa9.65□□□□□ -0.86
SRP54-213ENST00000556994 GFRA1P56159 465 aa9.65□□□□□ -0.86
SRP54-213ENST00000556994 HBG1P69891 147 aa9.65□□□□□ -0.86
SRP54-213ENST00000556994 HBG2P69892 147 aa9.65□□□□□ -0.86
SRP54-213ENST00000556994 P2RY6Q15077 328 aa9.65□□□□□ -0.86
SRP54-213ENST00000556994 NCR3LG1Q68D85 454 aa9.65□□□□□ -0.86
SRP54-213ENST00000556994 REC114Q7Z4M0 266 aa9.65□□□□□ -0.86
SRP54-213ENST00000556994 DMRTC2Q8IXT2 367 aaPredicted RBP9.65□□□□□ -0.86
SRP54-213ENST00000556994 OR5P3Q8WZ94 311 aa9.65□□□□□ -0.86
SRP54-213ENST00000556994 TAF15Q92804 592 aaKnown RBP eCLIP9.65□□□□□ -0.86
SRP54-213ENST00000556994 APOBEC3DQ96AK3 386 aaPredicted RBP9.65□□□□□ -0.86
SRP54-213ENST00000556994 PSMG3Q9BT73 122 aaPredicted RBP9.65□□□□□ -0.86
SRP54-213ENST00000556994 UBE2ZQ9H832 354 aaPredicted RBP9.65□□□□□ -0.86
SRP54-213ENST00000556994 SLC25A22Q9H936 323 aa9.65□□□□□ -0.86
SRP54-213ENST00000556994 CDH20Q9HBT6 801 aa9.65□□□□□ -0.86
SRP54-213ENST00000556994 PRSS50Q9UI38 385 aa9.65□□□□□ -0.86
SRP54-213ENST00000556994 PRRC2CQ9Y520 2896 aaKnown RBP9.65□□□□□ -0.87
SRP54-213ENST00000556994 AMBPP02760 352 aa9.65□□□□□ -0.87
SRP54-213ENST00000556994 SLC25A6P12236 298 aa9.65□□□□□ -0.87
SRP54-213ENST00000556994 DEFA4P12838 97 aa9.65□□□□□ -0.87
SRP54-213ENST00000556994 NDUFB7P17568 137 aa9.65□□□□□ -0.87
SRP54-213ENST00000556994 SERF2P84101 59 aa9.65□□□□□ -0.87
SRP54-213ENST00000556994 FAM53AQ6NSI3 398 aaPredicted RBP9.65□□□□□ -0.87
SRP54-213ENST00000556994 TMEM183AQ8IXX5 376 aa9.65□□□□□ -0.87
SRP54-213ENST00000556994 P2RX4Q99571 388 aa9.65□□□□□ -0.87
SRP54-213ENST00000556994 RIMS4Q9H426 269 aaPredicted RBP9.65□□□□□ -0.87
SRP54-213ENST00000556994 CACNA1DQ01668 2161 aa9.64□□□□□ -0.87
SRP54-213ENST00000556994 PATE3B3GLJ2 98 aa9.64□□□□□ -0.87
SRP54-213ENST00000556994 CLDN1O95832 211 aa9.64□□□□□ -0.87
SRP54-213ENST00000556994 PFN1P07737 140 aaKnown RBP9.64□□□□□ -0.87
SRP54-213ENST00000556994 GZMBP10144 247 aa9.64□□□□□ -0.87
SRP54-213ENST00000556994 CYB561P49447 251 aa9.64□□□□□ -0.87
SRP54-213ENST00000556994 SLC38A11Q08AI6 406 aa9.64□□□□□ -0.87
SRP54-213ENST00000556994 PRSS8Q16651 343 aa9.64□□□□□ -0.87
SRP54-213ENST00000556994 TMEM241Q24JQ0 296 aa9.64□□□□□ -0.87
SRP54-213ENST00000556994 PPP1R32Q7Z5V6 425 aa9.64□□□□□ -0.87
SRP54-213ENST00000556994 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.64□□□□□ -0.87
SRP54-213ENST00000556994 OR5T1Q8NG75 326 aa9.64□□□□□ -0.87
SRP54-213ENST00000556994 GTF3AQ92664 365 aaKnown RBP9.64□□□□□ -0.87
SRP54-213ENST00000556994 LSM10Q969L4 123 aaKnown RBP9.64□□□□□ -0.87
SRP54-213ENST00000556994 HES7Q9BYE0 225 aa9.64□□□□□ -0.87
SRP54-213ENST00000556994 PLA2G3Q9NZ20 509 aa9.64□□□□□ -0.87
SRP54-213ENST00000556994 NAT8Q9UHE5 227 aa9.64□□□□□ -0.87
SRP54-213ENST00000556994 TRAPPC2LQ9UL33 140 aa9.64□□□□□ -0.87
SRP54-213ENST00000556994 RNF150Q9ULK6 438 aa9.64□□□□□ -0.87
SRP54-213ENST00000556994 COL6A3P12111 3177 aa9.64□□□□□ -0.87
SRP54-213ENST00000556994 GALR2O43603 387 aaPredicted RBP9.64□□□□□ -0.87
SRP54-213ENST00000556994 CEACAM6P40199 344 aa9.64□□□□□ -0.87
SRP54-213ENST00000556994 RPL23P62829 140 aaKnown RBP9.64□□□□□ -0.87
SRP54-213ENST00000556994 MEF2BQ02080 365 aaPredicted RBP9.64□□□□□ -0.87
SRP54-213ENST00000556994 BSXQ3C1V8 233 aa9.64□□□□□ -0.87
SRP54-213ENST00000556994 ACSM6Q6P461 480 aa9.64□□□□□ -0.87
SRP54-213ENST00000556994 ZNF66Q6ZN08 573 aa9.64□□□□□ -0.87
SRP54-213ENST00000556994 FGFRL1Q8N441 504 aa9.64□□□□□ -0.87
SRP54-213ENST00000556994 POM121L2Q96KW2 1035 aa9.64□□□□□ -0.87
SRP54-213ENST00000556994 PCGF1Q9BSM1 259 aa9.64□□□□□ -0.87
SRP54-213ENST00000556994 CTDSP1Q9GZU7 261 aa9.64□□□□□ -0.87
SRP54-213ENST00000556994 SRD5A3Q9H8P0 318 aa9.64□□□□□ -0.87
SRP54-213ENST00000556994 TMEM9BQ9NQ34 198 aa9.64□□□□□ -0.87
SRP54-213ENST00000556994 GTF3C1Q12789 2109 aa9.63□□□□□ -0.87
SRP54-213ENST00000556994 TNRC6AQ8NDV7 1962 aaKnown RBP9.63□□□□□ -0.87
SRP54-213ENST00000556994 A0A1W2PPQ1 181 aa9.63□□□□□ -0.87
SRP54-213ENST00000556994 XKRY2A2RUG3 117 aa9.63□□□□□ -0.87
SRP54-213ENST00000556994 ANKRD30BLA7E2S9 258 aa9.63□□□□□ -0.87
SRP54-213ENST00000556994 ZNF705GA8MUZ8 300 aaPredicted RBP9.63□□□□□ -0.87
SRP54-213ENST00000556994 IFNA1P01562 189 aa9.63□□□□□ -0.87
SRP54-213ENST00000556994 APLNRP35414 380 aa9.63□□□□□ -0.87
SRP54-213ENST00000556994 WNT5AP41221 380 aa9.63□□□□□ -0.87
SRP54-213ENST00000556994 GALR1P47211 349 aa9.63□□□□□ -0.87
SRP54-213ENST00000556994 C3AR1Q16581 482 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms