RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 ERGIC1Q969X5 290 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 TMEM230Q96A57 120 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 MOB3AQ96BX8 217 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 GALNT14Q96FL9 552 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 SEC22AQ96IW7 307 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 C2orf50Q96LR7 162 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 ZNF488Q96MN9 340 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 SUCNR1Q9BXA5 334 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 NMES1Q9C002 83 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 MFFQ9GZY8 342 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 TMEM165Q9HC07 324 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 HES4Q9HCC6 221 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 C1orf123Q9NWV4 160 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 ZNF581Q9P0T4 197 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 TAAR3PQ9P1P4 343 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 FBXO9Q9UK97 447 aaPredicted RBP3.73□□□□□ -1.81
SRP54-212ENST00000556992 TRAPPC2LQ9UL33 140 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 ZDHHC8Q9ULC8 765 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 U3KQ87 197 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 SPTAN1Q13813 2472 aaKnown RBP3.73□□□□□ -1.81
SRP54-212ENST00000556992 BSNQ9UPA5 3926 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 FBN3Q75N90 2809 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 LRRK2Q5S007 2527 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 LRBAP50851 2863 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 IGLV3-9A0A075B6K5 115 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 FXYD6-FXYD2A0A087WZ82 144 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 TRBV6-7A0A0A0MS04 114 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 TRGV8A0A0C4DH27 118 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 C3orf85A0A1B0GTC6 90 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 TMEM30CPA0ZSE6 113 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 A6NLC8 198 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 NPIPB11E5RHQ5 1161 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 G3V3Q6 166 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 H0YL77 283 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 GPR31O00270 319 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 SLC33A1O00400 549 aaPredicted RBP3.72□□□□□ -1.81
SRP54-212ENST00000556992 BET1O15155 118 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 ARPC5O15511 151 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 MLNRO43193 412 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 ATP6V1G1O75348 118 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 TUSC2O75896 110 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 HAND1O96004 215 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 PPYP01298 95 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 SCTP09683 121 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 PET100P0DJ07 73 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 RPS2P15880 293 aaKnown RBP3.72□□□□□ -1.81
SRP54-212ENST00000556992 CXCL2P19875 107 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 AADACP22760 399 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 SSTR2P30874 369 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 PRDX2P32119 198 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 PIGPP57054 158 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 RND3P61587 244 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 SUPT4H1P63272 117 aaKnown RBP3.72□□□□□ -1.81
SRP54-212ENST00000556992 BAMBIQ13145 260 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 SLC9A3R2Q15599 337 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 SMIM21Q3B7S5 101 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 ANKRD55Q3KP44 614 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 IGSF11Q5DX21 431 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 SLC35E4Q6ICL7 350 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 TRAT1Q6PIZ9 186 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 WDR82Q6UXN9 313 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 Q6ZR03 302 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 ACOT7LQ6ZUV0 252 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 WDR86Q86TI4 376 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 SLC51BQ86UW2 128 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 LRTM2Q8N967 370 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 OR5T2Q8NGG2 359 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 PPP1R35Q8TAP8 253 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 MRPL30Q8TCC3 161 aaKnown RBP3.72□□□□□ -1.81
SRP54-212ENST00000556992 TMEM171Q8WVE6 324 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 PPP1R1CQ8WVI7 109 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 DYRK2Q92630 601 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 TOMM40LQ969M1 308 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 ELMOD3Q96FG2 381 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 LRRC46Q96FV0 321 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 AKR1E2Q96JD6 320 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 SLC5A7Q9GZV3 580 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 FXYD6Q9H0Q3 95 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 LIME1Q9H400 295 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 NCOR1P1Q9H4R4 102 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 NAA60Q9H7X0 242 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 HEXA-AS1Q9H8Q6 139 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 GSKIPQ9P0R6 139 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 DNAJB11Q9UBS4 358 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 NDRG3Q9UGV2 375 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 UBQLN2Q9UHD9 624 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 UBE2J1Q9Y385 318 aaPredicted RBP3.72□□□□□ -1.81
SRP54-212ENST00000556992 OR2W1Q9Y3N9 320 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 WIPI2Q9Y4P8 454 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 MAB21L2Q9Y586 359 aa3.72□□□□□ -1.81
SRP54-212ENST00000556992 PRRC2CQ9Y520 2896 aaKnown RBP3.71□□□□□ -1.82
SRP54-212ENST00000556992 hCG_1807616A0A1W2PRN6 198 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 DPRXA6NFQ7 191 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 TUBAL3A6NHL2 446 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 LRRC30A6NM36 301 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 RNF212BA8MTL3 300 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 ATP6V1G2-DDX39BF2Z307 99 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 SIRPB1O00241 398 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 HSPB6O14558 160 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 TAAR5O14804 337 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms