RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 C11orf88Q6PI97 169 aa8.25□□□□□ -1.09
SNX6-208ENST00000556712 C10orf99Q6UWK7 81 aa8.25□□□□□ -1.09
SNX6-208ENST00000556712 MOB1BQ7L9L4 216 aa8.25□□□□□ -1.09
SNX6-208ENST00000556712 ZNF554Q86TJ5 538 aa8.25□□□□□ -1.09
SNX6-208ENST00000556712 THNSL2Q86YJ6 484 aa8.25□□□□□ -1.09
SNX6-208ENST00000556712 TGIF2LXQ8IUE1 241 aa8.25□□□□□ -1.09
SNX6-208ENST00000556712 ODF3L1Q8IXM7 274 aa8.25□□□□□ -1.09
SNX6-208ENST00000556712 IZUMO1Q8IYV9 350 aa8.25□□□□□ -1.09
SNX6-208ENST00000556712 OR56B1Q8NGI3 324 aa8.25□□□□□ -1.09
SNX6-208ENST00000556712 WIPF2Q8TF74 440 aaPredicted RBP8.25□□□□□ -1.09
SNX6-208ENST00000556712 GALMQ96C23 342 aa8.25□□□□□ -1.09
SNX6-208ENST00000556712 CMSS1Q9BQ75 279 aaKnown RBP8.25□□□□□ -1.09
SNX6-208ENST00000556712 MRPL20Q9BYC9 149 aaKnown RBP8.25□□□□□ -1.09
SNX6-208ENST00000556712 WNT10AQ9GZT5 417 aa8.25□□□□□ -1.09
SNX6-208ENST00000556712 C12orf4Q9NQ89 552 aa8.25□□□□□ -1.09
SNX6-208ENST00000556712 ABRACLQ9P1F3 81 aa8.25□□□□□ -1.09
SNX6-208ENST00000556712 RAB22AQ9UL26 194 aa8.25□□□□□ -1.09
SNX6-208ENST00000556712 HSF4Q9ULV5 492 aa8.25□□□□□ -1.09
SNX6-208ENST00000556712 SSR3Q9UNL2 185 aa8.25□□□□□ -1.09
SNX6-208ENST00000556712 MGAM2Q2M2H8 2515 aa8.24□□□□□ -1.09
SNX6-208ENST00000556712 SAA2-SAA4A0A096LPE2 208 aa8.24□□□□□ -1.09
SNX6-208ENST00000556712 YPEL1O60688 119 aa8.24□□□□□ -1.09
SNX6-208ENST00000556712 SCTP09683 121 aa8.24□□□□□ -1.09
SNX6-208ENST00000556712 SAA2P0DJI9 122 aaPredicted RBP8.24□□□□□ -1.09
SNX6-208ENST00000556712 SNRPBP14678 240 aaKnown RBP8.24□□□□□ -1.09
SNX6-208ENST00000556712 GNB3P16520 340 aa8.24□□□□□ -1.09
SNX6-208ENST00000556712 CD36P16671 472 aa8.24□□□□□ -1.09
SNX6-208ENST00000556712 SDC2P34741 201 aa8.24□□□□□ -1.09
SNX6-208ENST00000556712 MXD1Q05195 221 aa8.24□□□□□ -1.09
SNX6-208ENST00000556712 NSUN5P1Q3KNT7 163 aa8.24□□□□□ -1.09
SNX6-208ENST00000556712 Q8N6K4 173 aa8.24□□□□□ -1.09
SNX6-208ENST00000556712 C5orf56Q8N8D9 126 aa8.24□□□□□ -1.09
SNX6-208ENST00000556712 OR2AK2Q8NG84 335 aa8.24□□□□□ -1.09
SNX6-208ENST00000556712 OR10R2Q8NGX6 335 aa8.24□□□□□ -1.09
SNX6-208ENST00000556712 LGALS14Q8TCE9 139 aa8.24□□□□□ -1.09
SNX6-208ENST00000556712 MAFIPQ8WZ33 124 aa8.24□□□□□ -1.09
SNX6-208ENST00000556712 EAF1Q96JC9 268 aaPredicted RBP8.24□□□□□ -1.09
SNX6-208ENST00000556712 YPEL2Q96QA6 119 aa8.24□□□□□ -1.09
SNX6-208ENST00000556712 CITED2Q99967 270 aaPredicted RBP8.24□□□□□ -1.09
SNX6-208ENST00000556712 CENPOQ9BU64 300 aa8.24□□□□□ -1.09
SNX6-208ENST00000556712 IFI27L2Q9H2X8 130 aa8.24□□□□□ -1.09
SNX6-208ENST00000556712 MMP27Q9H306 513 aa8.24□□□□□ -1.09
SNX6-208ENST00000556712 Q9N2K0 584 aa8.24□□□□□ -1.09
SNX6-208ENST00000556712 SLC23A1Q9UHI7 598 aa8.24□□□□□ -1.09
SNX6-208ENST00000556712 DAPK2Q9UIK4 370 aa8.24□□□□□ -1.09
SNX6-208ENST00000556712 KCNK7Q9Y2U2 307 aa8.24□□□□□ -1.09
SNX6-208ENST00000556712 WNK1Q9H4A3 2382 aa8.24□□□□□ -1.09
SNX6-208ENST00000556712 VWFP04275 2813 aa8.23□□□□□ -1.09
SNX6-208ENST00000556712 TRBV6-6A0A0A6YYG2 114 aa8.23□□□□□ -1.09
SNX6-208ENST00000556712 A0A1W2PRX2 142 aa8.23□□□□□ -1.09
SNX6-208ENST00000556712 NOTOA8MTQ0 251 aa8.23□□□□□ -1.09
SNX6-208ENST00000556712 RAB27BO00194 218 aa8.23□□□□□ -1.09
SNX6-208ENST00000556712 MFNGO00587 321 aa8.23□□□□□ -1.09
SNX6-208ENST00000556712 TXNL1O43396 289 aa8.23□□□□□ -1.09
SNX6-208ENST00000556712 CSF1P09603 554 aa8.23□□□□□ -1.09
SNX6-208ENST00000556712 CD3GP09693 182 aa8.23□□□□□ -1.09
SNX6-208ENST00000556712 RAB6AP20340 208 aa8.23□□□□□ -1.09
SNX6-208ENST00000556712 LSAMPQ13449 338 aa8.23□□□□□ -1.09
SNX6-208ENST00000556712 EBI3Q14213 229 aa8.23□□□□□ -1.09
SNX6-208ENST00000556712 SFXN4Q6P4A7 337 aa8.23□□□□□ -1.09
SNX6-208ENST00000556712 DTX3Q8N9I9 347 aa8.23□□□□□ -1.09
SNX6-208ENST00000556712 RAB3CQ96E17 227 aa8.23□□□□□ -1.09
SNX6-208ENST00000556712 KCTD7Q96MP8 289 aa8.23□□□□□ -1.09
SNX6-208ENST00000556712 ATG5Q9H1Y0 275 aa8.23□□□□□ -1.09
SNX6-208ENST00000556712 RIMS4Q9H426 269 aaPredicted RBP8.23□□□□□ -1.09
SNX6-208ENST00000556712 ZNF230Q9UIE0 474 aaPredicted RBP8.23□□□□□ -1.09
SNX6-208ENST00000556712 LINC00527Q9UJ94 153 aa8.23□□□□□ -1.09
SNX6-208ENST00000556712 ELF5Q9UKW6 265 aaPredicted RBP8.23□□□□□ -1.09
SNX6-208ENST00000556712 IGKV1-6A0A0C4DH72 117 aa8.22□□□□□ -1.09
SNX6-208ENST00000556712 NCBP2LA6PVI3 153 aaKnown RBP8.22□□□□□ -1.09
SNX6-208ENST00000556712 ADARB2-AS1A8MUL3 147 aa8.22□□□□□ -1.09
SNX6-208ENST00000556712 M0QZK8 103 aa8.22□□□□□ -1.09
SNX6-208ENST00000556712 FGF16O43320 207 aa8.22□□□□□ -1.09
SNX6-208ENST00000556712 LANCL1O43813 399 aa8.22□□□□□ -1.09
SNX6-208ENST00000556712 RGS11O94810 467 aa8.22□□□□□ -1.09
SNX6-208ENST00000556712 TNFAIP8O95379 198 aa8.22□□□□□ -1.09
SNX6-208ENST00000556712 MOSP00540 346 aa8.22□□□□□ -1.09
SNX6-208ENST00000556712 FCGR3AP08637 254 aa8.22□□□□□ -1.09
SNX6-208ENST00000556712 HIST1H1DP16402 221 aaKnown RBP8.22□□□□□ -1.09
SNX6-208ENST00000556712 CD1BP29016 333 aa8.22□□□□□ -1.09
SNX6-208ENST00000556712 LSM3P62310 102 aaKnown RBP8.22□□□□□ -1.09
SNX6-208ENST00000556712 RPL39P5Q59GN2 51 aa8.22□□□□□ -1.09
SNX6-208ENST00000556712 STEAP3Q658P3 488 aa8.22□□□□□ -1.09
SNX6-208ENST00000556712 ZNF833PQ6ZTB9 187 aa8.22□□□□□ -1.09
SNX6-208ENST00000556712 TSPAN14Q8NG11 270 aa8.22□□□□□ -1.09
SNX6-208ENST00000556712 OR5AU1Q8NGC0 362 aa8.22□□□□□ -1.09
SNX6-208ENST00000556712 OR2T10Q8NGZ9 312 aa8.22□□□□□ -1.09
SNX6-208ENST00000556712 ABHD14BQ96IU4 210 aa8.22□□□□□ -1.09
SNX6-208ENST00000556712 NOL4LQ96MY1 436 aaPredicted RBP8.22□□□□□ -1.09
SNX6-208ENST00000556712 NABP2Q9BQ15 211 aa8.22□□□□□ -1.09
SNX6-208ENST00000556712 A0A087WXM4 84 aa8.21□□□□□ -1.1
SNX6-208ENST00000556712 LINC01548A6NM66 108 aa8.21□□□□□ -1.1
SNX6-208ENST00000556712 TRDCB7Z8K6 153 aa8.21□□□□□ -1.1
SNX6-208ENST00000556712 HSPA12AO43301 675 aa8.21□□□□□ -1.1
SNX6-208ENST00000556712 CNTFRP26992 372 aa8.21□□□□□ -1.1
SNX6-208ENST00000556712 RANBP1P43487 201 aa8.21□□□□□ -1.1
SNX6-208ENST00000556712 MRPS15P82914 257 aaKnown RBP8.21□□□□□ -1.1
SNX6-208ENST00000556712 IGSF11Q5DX21 431 aa8.21□□□□□ -1.1
SNX6-208ENST00000556712 TCTEX1D4Q5JR98 221 aa8.21□□□□□ -1.1
SNX6-208ENST00000556712 KHDC1LQ5JSQ8 128 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms