RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 VSIG8P0DPA2 414 aa17.67■□□□□ 0.42
ACTN1-220ENST00000556433 CHATP28329 748 aa17.67■□□□□ 0.42
ACTN1-220ENST00000556433 ACTBP60709 375 aa17.67■□□□□ 0.42
ACTN1-220ENST00000556433 DCTN2Q13561 401 aaKnown RBP17.67■□□□□ 0.42
ACTN1-220ENST00000556433 C6orf141Q5SZD1 244 aa17.67■□□□□ 0.42
ACTN1-220ENST00000556433 LRRTM1Q86UE6 522 aa17.67■□□□□ 0.42
ACTN1-220ENST00000556433 YPEL2Q96QA6 119 aa17.67■□□□□ 0.42
ACTN1-220ENST00000556433 NABP2Q9BQ15 211 aa17.67■□□□□ 0.42
ACTN1-220ENST00000556433 ZNF251Q9BRH9 671 aa17.67■□□□□ 0.42
ACTN1-220ENST00000556433 TMED9Q9BVK6 235 aa17.67■□□□□ 0.42
ACTN1-220ENST00000556433 PTGES3LE9PB15 166 aa17.66■□□□□ 0.42
ACTN1-220ENST00000556433 CASQ2O14958 399 aaPredicted RBP17.66■□□□□ 0.42
ACTN1-220ENST00000556433 RAMP3O60896 148 aa17.66■□□□□ 0.42
ACTN1-220ENST00000556433 CDK1P06493 297 aa17.66■□□□□ 0.42
ACTN1-220ENST00000556433 PSMB8P28062 276 aa17.66■□□□□ 0.42
ACTN1-220ENST00000556433 OR3A3P47888 321 aa17.66■□□□□ 0.42
ACTN1-220ENST00000556433 RBM48Q5RL73 367 aaKnown RBP17.66■□□□□ 0.42
ACTN1-220ENST00000556433 LY6G6FQ5SQ64 297 aa17.66■□□□□ 0.42
ACTN1-220ENST00000556433 C1orf100Q5SVJ3 147 aa17.66■□□□□ 0.42
ACTN1-220ENST00000556433 C6orf201Q7Z4U5 140 aa17.66■□□□□ 0.42
ACTN1-220ENST00000556433 C4orf3Q8WVX3 66 aa17.66■□□□□ 0.42
ACTN1-220ENST00000556433 CHCHD6Q9BRQ6 235 aa17.66■□□□□ 0.42
ACTN1-220ENST00000556433 MND1Q9BWT6 205 aa17.66■□□□□ 0.42
ACTN1-220ENST00000556433 ZNF580Q9UK33 172 aa17.66■□□□□ 0.42
ACTN1-220ENST00000556433 WSB1Q9Y6I7 421 aa17.66■□□□□ 0.42
ACTN1-220ENST00000556433 DNAH9Q9NYC9 4486 aa17.66■□□□□ 0.42
ACTN1-220ENST00000556433 CNTFRP26992 372 aa17.65■□□□□ 0.42
ACTN1-220ENST00000556433 HTR2CP28335 458 aa17.65■□□□□ 0.42
ACTN1-220ENST00000556433 LUMP51884 338 aaPredicted RBP17.65■□□□□ 0.42
ACTN1-220ENST00000556433 RPS27AP62979 156 aaKnown RBP17.65■□□□□ 0.42
ACTN1-220ENST00000556433 RNLSQ5VYX0 342 aa17.65■□□□□ 0.42
ACTN1-220ENST00000556433 CEACAM19Q7Z692 300 aa17.65■□□□□ 0.42
ACTN1-220ENST00000556433 OR2AK2Q8NG84 335 aa17.65■□□□□ 0.42
ACTN1-220ENST00000556433 PHYHIPQ92561 330 aa17.65■□□□□ 0.42
ACTN1-220ENST00000556433 TMEM59Q9BXS4 323 aa17.65■□□□□ 0.42
ACTN1-220ENST00000556433 ABRACLQ9P1F3 81 aa17.65■□□□□ 0.42
ACTN1-220ENST00000556433 G3V318 75 aa17.64■□□□□ 0.41
ACTN1-220ENST00000556433 SRMP19623 302 aa17.64■□□□□ 0.41
ACTN1-220ENST00000556433 HMGN3Q15651 99 aa17.64■□□□□ 0.41
ACTN1-220ENST00000556433 C9orf66Q5T8R8 295 aa17.64■□□□□ 0.41
ACTN1-220ENST00000556433 TMEM65Q6PI78 240 aa17.64■□□□□ 0.41
ACTN1-220ENST00000556433 ZNF833PQ6ZTB9 187 aa17.64■□□□□ 0.41
ACTN1-220ENST00000556433 KCNG3Q8TAE7 436 aa17.64■□□□□ 0.41
ACTN1-220ENST00000556433 IL1F10Q8WWZ1 152 aa17.64■□□□□ 0.41
ACTN1-220ENST00000556433 ANKRD60Q9BZ19 345 aa17.64■□□□□ 0.41
ACTN1-220ENST00000556433 VCXQ9H320 206 aa17.64■□□□□ 0.41
ACTN1-220ENST00000556433 OR51J1Q9H342 316 aa17.64■□□□□ 0.41
ACTN1-220ENST00000556433 SAA2-SAA4A0A096LPE2 208 aa17.63■□□□□ 0.41
ACTN1-220ENST00000556433 NBR2O15453 112 aa17.63■□□□□ 0.41
ACTN1-220ENST00000556433 SAA2P0DJI9 122 aaPredicted RBP17.63■□□□□ 0.41
ACTN1-220ENST00000556433 PPIFP30405 207 aaKnown RBP17.63■□□□□ 0.41
ACTN1-220ENST00000556433 SPHARQ15513 63 aa17.63■□□□□ 0.41
ACTN1-220ENST00000556433 HSD17B12Q53GQ0 312 aa17.63■□□□□ 0.41
ACTN1-220ENST00000556433 LIN54Q6MZP7 749 aa17.63■□□□□ 0.41
ACTN1-220ENST00000556433 OR11H1Q8NG94 326 aa17.63■□□□□ 0.41
ACTN1-220ENST00000556433 NICN1Q9BSH3 213 aa17.63■□□□□ 0.41
ACTN1-220ENST00000556433 TM2D1Q9BX74 207 aa17.63■□□□□ 0.41
ACTN1-220ENST00000556433 KLK15Q9H2R5 256 aa17.63■□□□□ 0.41
ACTN1-220ENST00000556433 KCNK15Q9H427 330 aa17.63■□□□□ 0.41
ACTN1-220ENST00000556433 CHMP1AQ9HD42 196 aaPredicted RBP17.63■□□□□ 0.41
ACTN1-220ENST00000556433 PARP11Q9NR21 331 aa17.63■□□□□ 0.41
ACTN1-220ENST00000556433 STEAP1Q9UHE8 339 aa17.63■□□□□ 0.41
ACTN1-220ENST00000556433 SEC14L6B5MCN3 397 aa17.62■□□□□ 0.41
ACTN1-220ENST00000556433 ATP6V0E1O15342 81 aa17.62■□□□□ 0.41
ACTN1-220ENST00000556433 HLA-DRB1P01911 266 aa17.62■□□□□ 0.41
ACTN1-220ENST00000556433 BLVRBP30043 206 aaPredicted RBP17.62■□□□□ 0.41
ACTN1-220ENST00000556433 UNC119Q13432 240 aa17.62■□□□□ 0.41
ACTN1-220ENST00000556433 C5orf64Q2M2E5 130 aa17.62■□□□□ 0.41
ACTN1-220ENST00000556433 SETD6Q8TBK2 473 aa17.62■□□□□ 0.41
ACTN1-220ENST00000556433 UBE2E2Q96LR5 201 aa17.62■□□□□ 0.41
ACTN1-220ENST00000556433 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.62■□□□□ 0.41
ACTN1-220ENST00000556433 PLEKHJ1Q9NW61 149 aa17.62■□□□□ 0.41
ACTN1-220ENST00000556433 LSM2Q9Y333 95 aaKnown RBP17.62■□□□□ 0.41
ACTN1-220ENST00000556433 IGHV7-81A0A0B4J1V7 117 aa17.61■□□□□ 0.41
ACTN1-220ENST00000556433 ST8SIA5O15466 376 aa17.61■□□□□ 0.41
ACTN1-220ENST00000556433 ECI1P42126 302 aa17.61■□□□□ 0.41
ACTN1-220ENST00000556433 FHL3Q13643 280 aa17.61■□□□□ 0.41
ACTN1-220ENST00000556433 KIAA0141Q14154 515 aaPredicted RBP17.61■□□□□ 0.41
ACTN1-220ENST00000556433 MED22Q15528 200 aa17.61■□□□□ 0.41
ACTN1-220ENST00000556433 SVOPQ8N4V2 548 aa17.61■□□□□ 0.41
ACTN1-220ENST00000556433 ZNF491Q8N8L2 437 aa17.61■□□□□ 0.41
ACTN1-220ENST00000556433 NPBQ8NG41 125 aa17.61■□□□□ 0.41
ACTN1-220ENST00000556433 MYOZ3Q8TDC0 251 aa17.61■□□□□ 0.41
ACTN1-220ENST00000556433 IFI27L2Q9H2X8 130 aa17.61■□□□□ 0.41
ACTN1-220ENST00000556433 SCN3BQ9NY72 215 aa17.61■□□□□ 0.41
ACTN1-220ENST00000556433 KIAA1456Q9P272 454 aa17.61■□□□□ 0.41
ACTN1-220ENST00000556433 SCOCQ9UIL1 159 aa17.61■□□□□ 0.41
ACTN1-220ENST00000556433 VSIG4Q9Y279 399 aa17.61■□□□□ 0.41
ACTN1-220ENST00000556433 TRAV41A0A0B4J266 112 aa17.6■□□□□ 0.41
ACTN1-220ENST00000556433 TMEM14DPA8MWL7 114 aa17.6■□□□□ 0.41
ACTN1-220ENST00000556433 SLC22A1O15245 554 aa17.6■□□□□ 0.41
ACTN1-220ENST00000556433 NAPSAO96009 420 aa17.6■□□□□ 0.41
ACTN1-220ENST00000556433 CD37P11049 281 aa17.6■□□□□ 0.41
ACTN1-220ENST00000556433 QRFPP83859 136 aa17.6■□□□□ 0.41
ACTN1-220ENST00000556433 ZNF880Q6PDB4 577 aa17.6■□□□□ 0.41
ACTN1-220ENST00000556433 OR1N2Q8NGR9 330 aa17.6■□□□□ 0.41
ACTN1-220ENST00000556433 PRR25Q96S07 402 aa17.6■□□□□ 0.41
ACTN1-220ENST00000556433 GNB4Q9HAV0 340 aa17.6■□□□□ 0.41
ACTN1-220ENST00000556433 PIPOXQ9P0Z9 390 aa17.6■□□□□ 0.41
ACTN1-220ENST00000556433 RAB29O14966 203 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms