RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 CHEK1O14757 476 aa12.94□□□□□ -0.34
ARHGEF40-207ENST00000556399 COX7A2P2O60397 106 aa12.94□□□□□ -0.34
ARHGEF40-207ENST00000556399 HOXA5P20719 270 aa12.94□□□□□ -0.34
ARHGEF40-207ENST00000556399 RBKSQ9H477 322 aa12.94□□□□□ -0.34
ARHGEF40-207ENST00000556399 WNT16Q9UBV4 365 aa12.94□□□□□ -0.34
ARHGEF40-207ENST00000556399 PMS2P1A4D2B8 440 aa12.94□□□□□ -0.34
ARHGEF40-207ENST00000556399 MNX1P50219 401 aaPredicted RBP12.94□□□□□ -0.34
ARHGEF40-207ENST00000556399 BPIFB3P59826 476 aa12.94□□□□□ -0.34
ARHGEF40-207ENST00000556399 KCNMB1Q16558 191 aa12.94□□□□□ -0.34
ARHGEF40-207ENST00000556399 LINC00469Q8N7U9 141 aa12.94□□□□□ -0.34
ARHGEF40-207ENST00000556399 FNDC1Q4ZHG4 1894 aaPredicted RBP12.94□□□□□ -0.34
ARHGEF40-207ENST00000556399 A0A1B0GV90 55 aa12.94□□□□□ -0.34
ARHGEF40-207ENST00000556399 VAMP3Q15836 100 aa12.94□□□□□ -0.34
ARHGEF40-207ENST00000556399 OR8G5Q8NG78 346 aa12.94□□□□□ -0.34
ARHGEF40-207ENST00000556399 SGMS2Q8NHU3 365 aa12.94□□□□□ -0.34
ARHGEF40-207ENST00000556399 SRXN1Q9BYN0 137 aa12.94□□□□□ -0.34
ARHGEF40-207ENST00000556399 SH2D2AQ9NP31 389 aa12.94□□□□□ -0.34
ARHGEF40-207ENST00000556399 GCGP01275 180 aa12.94□□□□□ -0.34
ARHGEF40-207ENST00000556399 MAGEA5P43359 124 aa12.94□□□□□ -0.34
ARHGEF40-207ENST00000556399 FAM89BQ8N5H3 189 aa12.94□□□□□ -0.34
ARHGEF40-207ENST00000556399 RPRMQ9NS64 109 aa12.94□□□□□ -0.34
ARHGEF40-207ENST00000556399 COA4Q9NYJ1 87 aa12.94□□□□□ -0.34
ARHGEF40-207ENST00000556399 PROCRQ9UNN8 238 aa12.94□□□□□ -0.34
ARHGEF40-207ENST00000556399 PLXND1Q9Y4D7 1925 aa12.93□□□□□ -0.34
ARHGEF40-207ENST00000556399 IGHV1-45A0A0A0MS14 117 aa12.93□□□□□ -0.34
ARHGEF40-207ENST00000556399 LRRC30A6NM36 301 aa12.93□□□□□ -0.34
ARHGEF40-207ENST00000556399 ZBTB34Q8NCN2 500 aa12.93□□□□□ -0.34
ARHGEF40-207ENST00000556399 SH3BGRL2Q9UJC5 107 aa12.93□□□□□ -0.34
ARHGEF40-207ENST00000556399 IGKV1D-8A0A087WSZ0 117 aa12.93□□□□□ -0.34
ARHGEF40-207ENST00000556399 A0A1W2PR77 199 aa12.93□□□□□ -0.34
ARHGEF40-207ENST00000556399 TRAT1Q6PIZ9 186 aa12.93□□□□□ -0.34
ARHGEF40-207ENST00000556399 OR5AU1Q8NGC0 362 aa12.93□□□□□ -0.34
ARHGEF40-207ENST00000556399 Q8WTZ3 238 aa12.93□□□□□ -0.34
ARHGEF40-207ENST00000556399 LRRC29Q8WV35 223 aa12.93□□□□□ -0.34
ARHGEF40-207ENST00000556399 WNT5BQ9H1J7 359 aa12.93□□□□□ -0.34
ARHGEF40-207ENST00000556399 TINAGQ9UJW2 476 aa12.93□□□□□ -0.34
ARHGEF40-207ENST00000556399 C5orf52A6NGY3 159 aa12.93□□□□□ -0.34
ARHGEF40-207ENST00000556399 M0R1B8 84 aa12.93□□□□□ -0.34
ARHGEF40-207ENST00000556399 TIAF1O95411 115 aa12.93□□□□□ -0.34
ARHGEF40-207ENST00000556399 FOLR2P14207 255 aa12.93□□□□□ -0.34
ARHGEF40-207ENST00000556399 CPEB3Q8NE35 698 aaKnown RBP12.93□□□□□ -0.34
ARHGEF40-207ENST00000556399 TBX15Q96SF7 602 aa12.93□□□□□ -0.34
ARHGEF40-207ENST00000556399 CHRDL1Q9BU40 450 aa12.93□□□□□ -0.34
ARHGEF40-207ENST00000556399 TRGV10A0A0A0MS01 117 aa12.93□□□□□ -0.34
ARHGEF40-207ENST00000556399 FAM157CP0CG43 387 aa12.93□□□□□ -0.34
ARHGEF40-207ENST00000556399 WDR73Q6P4I2 378 aa12.93□□□□□ -0.34
ARHGEF40-207ENST00000556399 RTN4RL2Q86UN3 420 aa12.93□□□□□ -0.34
ARHGEF40-207ENST00000556399 OR1L6Q8NGR2 347 aa12.93□□□□□ -0.34
ARHGEF40-207ENST00000556399 CT55Q8WUE5 264 aa12.93□□□□□ -0.34
ARHGEF40-207ENST00000556399 SRP14P37108 136 aaKnown RBP12.92□□□□□ -0.34
ARHGEF40-207ENST00000556399 ACSM6Q6P461 480 aa12.92□□□□□ -0.34
ARHGEF40-207ENST00000556399 SLC23A3Q6PIS1 610 aa12.92□□□□□ -0.34
ARHGEF40-207ENST00000556399 LYG1Q8N1E2 194 aa12.92□□□□□ -0.34
ARHGEF40-207ENST00000556399 PAM16Q9Y3D7 125 aa12.92□□□□□ -0.34
ARHGEF40-207ENST00000556399 ZNF729A6NN14 1252 aaPredicted RBP12.92□□□□□ -0.34
ARHGEF40-207ENST00000556399 M0QZK8 103 aa12.92□□□□□ -0.34
ARHGEF40-207ENST00000556399 GGCTO75223 188 aaKnown RBP12.92□□□□□ -0.34
ARHGEF40-207ENST00000556399 TCL1AP56279 114 aa12.92□□□□□ -0.34
ARHGEF40-207ENST00000556399 LHFPL1Q86WI0 220 aa12.92□□□□□ -0.34
ARHGEF40-207ENST00000556399 SARAFQ96BY9 339 aa12.92□□□□□ -0.34
ARHGEF40-207ENST00000556399 DMRTA2Q96SC8 542 aa12.92□□□□□ -0.34
ARHGEF40-207ENST00000556399 TMEM204Q9BSN7 226 aa12.92□□□□□ -0.34
ARHGEF40-207ENST00000556399 ABHD14AQ9BUJ0 271 aa12.92□□□□□ -0.34
ARHGEF40-207ENST00000556399 DECR2Q9NUI1 292 aa12.92□□□□□ -0.34
ARHGEF40-207ENST00000556399 IL17BQ9UHF5 180 aa12.92□□□□□ -0.34
ARHGEF40-207ENST00000556399 MPLP40238 635 aa12.92□□□□□ -0.34
ARHGEF40-207ENST00000556399 OR10X1Q8NGY0 326 aa12.92□□□□□ -0.34
ARHGEF40-207ENST00000556399 SPSB2Q99619 263 aa12.92□□□□□ -0.34
ARHGEF40-207ENST00000556399 ZNF253O75346 499 aa12.92□□□□□ -0.34
ARHGEF40-207ENST00000556399 AESQ08117 197 aa12.92□□□□□ -0.34
ARHGEF40-207ENST00000556399 FAM162BQ5T6X4 162 aa12.92□□□□□ -0.34
ARHGEF40-207ENST00000556399 REC114Q7Z4M0 266 aa12.92□□□□□ -0.34
ARHGEF40-207ENST00000556399 FGFRL1Q8N441 504 aa12.92□□□□□ -0.34
ARHGEF40-207ENST00000556399 TCTEX1D1Q8N7M0 179 aa12.92□□□□□ -0.34
ARHGEF40-207ENST00000556399 OR4P4Q8NGL7 312 aa12.92□□□□□ -0.34
ARHGEF40-207ENST00000556399 NDUFB4O95168 129 aa12.91□□□□□ -0.34
ARHGEF40-207ENST00000556399 CCL1P22362 96 aa12.91□□□□□ -0.34
ARHGEF40-207ENST00000556399 IER3P46695 156 aa12.91□□□□□ -0.34
ARHGEF40-207ENST00000556399 HLA-DRB5Q30154 266 aa12.91□□□□□ -0.34
ARHGEF40-207ENST00000556399 LYZL4Q96KX0 146 aa12.91□□□□□ -0.34
ARHGEF40-207ENST00000556399 CXXC4Q9H2H0 198 aa12.91□□□□□ -0.34
ARHGEF40-207ENST00000556399 WFDC1Q9HC57 220 aa12.91□□□□□ -0.34
ARHGEF40-207ENST00000556399 THSD7BQ9C0I4 1608 aa12.91□□□□□ -0.34
ARHGEF40-207ENST00000556399 RTTNQ86VV8 2226 aa12.91□□□□□ -0.34
ARHGEF40-207ENST00000556399 A0A087WWC5 75 aa12.91□□□□□ -0.34
ARHGEF40-207ENST00000556399 SHISA7A6NL88 538 aa12.91□□□□□ -0.34
ARHGEF40-207ENST00000556399 RNASEKQ6P5S7 137 aaKnown RBP12.91□□□□□ -0.34
ARHGEF40-207ENST00000556399 S100A7AQ86SG5 101 aa12.91□□□□□ -0.34
ARHGEF40-207ENST00000556399 HSD17B10Q99714 261 aaKnown RBP12.91□□□□□ -0.34
ARHGEF40-207ENST00000556399 SPRY3O43610 288 aa12.91□□□□□ -0.34
ARHGEF40-207ENST00000556399 GNG10P50151 68 aa12.91□□□□□ -0.34
ARHGEF40-207ENST00000556399 C18orf12Q96KH6 178 aa12.91□□□□□ -0.34
ARHGEF40-207ENST00000556399 DLL3Q9NYJ7 618 aa12.91□□□□□ -0.34
ARHGEF40-207ENST00000556399 OR1A1Q9P1Q5 309 aa12.91□□□□□ -0.34
ARHGEF40-207ENST00000556399 PRR19A6NJB7 356 aa12.91□□□□□ -0.34
ARHGEF40-207ENST00000556399 DBX1A6NMT0 343 aa12.91□□□□□ -0.34
ARHGEF40-207ENST00000556399 TNFSF15O95150 251 aa12.91□□□□□ -0.34
ARHGEF40-207ENST00000556399 RPLP1P05386 114 aaKnown RBP12.91□□□□□ -0.34
ARHGEF40-207ENST00000556399 IL3RAP26951 378 aa12.91□□□□□ -0.34
ARHGEF40-207ENST00000556399 VN1R17PQ8TDU5 208 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms