RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 TRAPPC2LQ9UL33 140 aa8.25□□□□□ -1.09
SYNE2-221ENST00000556342 MRPS28Q9Y2Q9 187 aaKnown RBP8.25□□□□□ -1.09
SYNE2-221ENST00000556342 IGHV4OR15-8A0A075B7B6 117 aa8.24□□□□□ -1.09
SYNE2-221ENST00000556342 A0A087WW49 117 aa8.24□□□□□ -1.09
SYNE2-221ENST00000556342 SNTNA6NMZ2 147 aa8.24□□□□□ -1.09
SYNE2-221ENST00000556342 A8MZ25 164 aa8.24□□□□□ -1.09
SYNE2-221ENST00000556342 NBR2O15453 112 aa8.24□□□□□ -1.09
SYNE2-221ENST00000556342 SOX15O60248 233 aa8.24□□□□□ -1.09
SYNE2-221ENST00000556342 HBZP02008 142 aa8.24□□□□□ -1.09
SYNE2-221ENST00000556342 CD2P06729 351 aa8.24□□□□□ -1.09
SYNE2-221ENST00000556342 ZNF93P35789 620 aaPredicted RBP8.24□□□□□ -1.09
SYNE2-221ENST00000556342 GBX2P52951 348 aaPredicted RBP8.24□□□□□ -1.09
SYNE2-221ENST00000556342 PITPNAQ00169 270 aa8.24□□□□□ -1.09
SYNE2-221ENST00000556342 NDPQ00604 133 aa8.24□□□□□ -1.09
SYNE2-221ENST00000556342 ECSCRQ19T08 205 aa8.24□□□□□ -1.09
SYNE2-221ENST00000556342 C5orf64Q2M2E5 130 aa8.24□□□□□ -1.09
SYNE2-221ENST00000556342 C19orf54Q5BKX5 351 aa8.24□□□□□ -1.09
SYNE2-221ENST00000556342 C6orf183Q5T699 404 aa8.24□□□□□ -1.09
SYNE2-221ENST00000556342 SYT6Q5T7P8 510 aaPredicted RBP8.24□□□□□ -1.09
SYNE2-221ENST00000556342 DDI2Q5TDH0 399 aa8.24□□□□□ -1.09
SYNE2-221ENST00000556342 LIN54Q6MZP7 749 aa8.24□□□□□ -1.09
SYNE2-221ENST00000556342 LYPD6Q86Y78 171 aa8.24□□□□□ -1.09
SYNE2-221ENST00000556342 Q8N1Y9 231 aa8.24□□□□□ -1.09
SYNE2-221ENST00000556342 PRR18Q8N4B5 295 aa8.24□□□□□ -1.09
SYNE2-221ENST00000556342 OR4K15Q8NH41 348 aa8.24□□□□□ -1.09
SYNE2-221ENST00000556342 OR1L1Q8NH94 360 aa8.24□□□□□ -1.09
SYNE2-221ENST00000556342 OR4C12Q96R67 309 aa8.24□□□□□ -1.09
SYNE2-221ENST00000556342 TMEM138Q9NPI0 162 aa8.24□□□□□ -1.09
SYNE2-221ENST00000556342 PAK1IP1Q9NWT1 392 aaPredicted RBP8.24□□□□□ -1.09
SYNE2-221ENST00000556342 ERVK13-1Q9NX77 482 aa8.24□□□□□ -1.09
SYNE2-221ENST00000556342 RCC2Q9P258 522 aaKnown RBP8.24□□□□□ -1.09
SYNE2-221ENST00000556342 NKX1-2Q9UD57 310 aaPredicted RBP8.24□□□□□ -1.09
SYNE2-221ENST00000556342 A0A1W2PN81 502 aa8.23□□□□□ -1.09
SYNE2-221ENST00000556342 A0A1W2PP11 408 aa8.23□□□□□ -1.09
SYNE2-221ENST00000556342 SAC3D1A6NKF1 404 aa8.23□□□□□ -1.09
SYNE2-221ENST00000556342 NOTOA8MTQ0 251 aa8.23□□□□□ -1.09
SYNE2-221ENST00000556342 HSPA12AO43301 675 aa8.23□□□□□ -1.09
SYNE2-221ENST00000556342 ZNF780AO75290 641 aaPredicted RBP8.23□□□□□ -1.09
SYNE2-221ENST00000556342 NDUFA3O95167 84 aa8.23□□□□□ -1.09
SYNE2-221ENST00000556342 GTF2F2P13984 249 aa8.23□□□□□ -1.09
SYNE2-221ENST00000556342 CHRNA7P36544 502 aa8.23□□□□□ -1.09
SYNE2-221ENST00000556342 PPP3R1P63098 170 aa8.23□□□□□ -1.09
SYNE2-221ENST00000556342 ADARB1P78563 741 aaKnown RBP8.23□□□□□ -1.09
SYNE2-221ENST00000556342 SLC22A6Q4U2R8 563 aa8.23□□□□□ -1.09
SYNE2-221ENST00000556342 MORN2Q502X0 79 aa8.23□□□□□ -1.09
SYNE2-221ENST00000556342 HAPLN4Q86UW8 402 aa8.23□□□□□ -1.09
SYNE2-221ENST00000556342 NPBQ8NG41 125 aa8.23□□□□□ -1.09
SYNE2-221ENST00000556342 GPR148Q8TDV2 347 aa8.23□□□□□ -1.09
SYNE2-221ENST00000556342 CASTOR1Q8WTX7 329 aa8.23□□□□□ -1.09
SYNE2-221ENST00000556342 TMEM106AQ96A25 262 aa8.23□□□□□ -1.09
SYNE2-221ENST00000556342 CENPNQ96H22 339 aaPredicted RBP8.23□□□□□ -1.09
SYNE2-221ENST00000556342 S100A13Q99584 98 aa8.23□□□□□ -1.09
SYNE2-221ENST00000556342 NABP2Q9BQ15 211 aa8.23□□□□□ -1.09
SYNE2-221ENST00000556342 MRPL20Q9BYC9 149 aaKnown RBP8.23□□□□□ -1.09
SYNE2-221ENST00000556342 CST11Q9H112 138 aa8.23□□□□□ -1.09
SYNE2-221ENST00000556342 SPACA1Q9HBV2 294 aa8.23□□□□□ -1.09
SYNE2-221ENST00000556342 OR2S2Q9NQN1 319 aa8.23□□□□□ -1.09
SYNE2-221ENST00000556342 ETAA1Q9NY74 926 aa8.23□□□□□ -1.09
SYNE2-221ENST00000556342 AASSQ9UDR5 926 aa8.23□□□□□ -1.09
SYNE2-221ENST00000556342 FOXA2Q9Y261 457 aaPredicted RBP8.23□□□□□ -1.09
SYNE2-221ENST00000556342 ERGIC3Q9Y282 383 aa8.23□□□□□ -1.09
SYNE2-221ENST00000556342 FBXO7Q9Y3I1 522 aa8.23□□□□□ -1.09
SYNE2-221ENST00000556342 MCRIP1C9JLW8 97 aa8.22□□□□□ -1.09
SYNE2-221ENST00000556342 FADS2O95864 444 aaKnown RBP8.22□□□□□ -1.09
SYNE2-221ENST00000556342 ALPLP05186 524 aa8.22□□□□□ -1.09
SYNE2-221ENST00000556342 MED14OSP0DP75 135 aa8.22□□□□□ -1.09
SYNE2-221ENST00000556342 RCC1P18754 421 aaPredicted RBP8.22□□□□□ -1.09
SYNE2-221ENST00000556342 GTF2A1P52655 376 aaPredicted RBP8.22□□□□□ -1.09
SYNE2-221ENST00000556342 CRIP2P52943 208 aaPredicted RBP8.22□□□□□ -1.09
SYNE2-221ENST00000556342 GNMTQ14749 295 aa8.22□□□□□ -1.09
SYNE2-221ENST00000556342 PLECQ15149 4684 aaKnown RBP8.22□□□□□ -1.09
SYNE2-221ENST00000556342 ANKRD39Q53RE8 183 aa8.22□□□□□ -1.09
SYNE2-221ENST00000556342 TRAT1Q6PIZ9 186 aa8.22□□□□□ -1.09
SYNE2-221ENST00000556342 SGPP2Q8IWX5 399 aa8.22□□□□□ -1.09
SYNE2-221ENST00000556342 ODF3L1Q8IXM7 274 aa8.22□□□□□ -1.09
SYNE2-221ENST00000556342 GAPTQ8N292 157 aa8.22□□□□□ -1.09
SYNE2-221ENST00000556342 TCTEX1D1Q8N7M0 179 aa8.22□□□□□ -1.09
SYNE2-221ENST00000556342 FLYWCH2Q96CP2 140 aaKnown RBP8.22□□□□□ -1.09
SYNE2-221ENST00000556342 SPATA25Q9BR10 227 aa8.22□□□□□ -1.09
SYNE2-221ENST00000556342 ABHD14AQ9BUJ0 271 aa8.22□□□□□ -1.09
SYNE2-221ENST00000556342 TAF9BQ9HBM6 251 aa8.22□□□□□ -1.09
SYNE2-221ENST00000556342 KIAA1456Q9P272 454 aa8.22□□□□□ -1.09
SYNE2-221ENST00000556342 SHOXO15266 292 aa8.21□□□□□ -1.1
SYNE2-221ENST00000556342 CA11O75493 328 aa8.21□□□□□ -1.1
SYNE2-221ENST00000556342 JTBO76095 146 aa8.21□□□□□ -1.1
SYNE2-221ENST00000556342 IGLV1-51P01701 117 aa8.21□□□□□ -1.1
SYNE2-221ENST00000556342 IGHV3-11P01762 117 aa8.21□□□□□ -1.1
SYNE2-221ENST00000556342 HSPB1P04792 205 aaKnown RBP8.21□□□□□ -1.1
SYNE2-221ENST00000556342 GABRB1P18505 474 aa8.21□□□□□ -1.1
SYNE2-221ENST00000556342 BDKRB2P30411 391 aa8.21□□□□□ -1.1
SYNE2-221ENST00000556342 CX3CL1P78423 397 aa8.21□□□□□ -1.1
SYNE2-221ENST00000556342 GPR176Q14439 515 aa8.21□□□□□ -1.1
SYNE2-221ENST00000556342 LRRC36Q1X8D7 754 aa8.21□□□□□ -1.1
SYNE2-221ENST00000556342 KRTAP19-4Q3LI73 84 aa8.21□□□□□ -1.1
SYNE2-221ENST00000556342 ZIK1Q3SY52 487 aaPredicted RBP8.21□□□□□ -1.1
SYNE2-221ENST00000556342 C1orf146Q5VVC0 180 aa8.21□□□□□ -1.1
SYNE2-221ENST00000556342 ZNF660Q6AZW8 331 aaPredicted RBP8.21□□□□□ -1.1
SYNE2-221ENST00000556342 XAF1Q6GPH4 301 aa8.21□□□□□ -1.1
SYNE2-221ENST00000556342 RAB12Q6IQ22 244 aa8.21□□□□□ -1.1
SYNE2-221ENST00000556342 PYHIN1Q6K0P9 492 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms