RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 SLAMF9Q96A28 289 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 NRBF2Q96F24 287 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 CENPNQ96H22 339 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-239ENST00000556315 OR5B12Q96R08 314 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 S1PR3Q99500 378 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 BCL7BQ9BQE9 202 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 GORASP2Q9H8Y8 452 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 MED20Q9H944 212 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 PLGRKTQ9HBL7 147 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 PLSCR3Q9NRY6 295 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 OR6C3Q9NZP0 311 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 ACTR3BQ9P1U1 418 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 NUFIP1Q9UHK0 495 aaKnown RBP3.69□□□□□ -1.82
ATXN3-239ENST00000556315 LAMP5Q9UJQ1 280 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 KLHDC2Q9Y2U9 406 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 CEPT1Q9Y6K0 416 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 U3KQV3 271 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 V9GYS6 101 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 PCLOQ9Y6V0 5065 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 RYR1P21817 5038 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 IGKV1-27A0A075B6S5 117 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 IGHV1-3A0A0C4DH29 117 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 TRBV2A0A0J9YWF9 115 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 A0A1B0GTI1 187 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 A6NIN4 97 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 H0Y980 276 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 SIRPB1O00241 398 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 TNFRSF11BO00300 401 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 MRPS14O60783 128 aaKnown RBP3.68□□□□□ -1.82
ATXN3-239ENST00000556315 ENTPD6O75354 484 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 CCNB2O95067 398 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 OR2H2O95918 312 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 MOSP00540 346 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 SERPINA3P01011 423 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 IGLV1-51P01701 117 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 TTRP02766 147 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 SEMG1P04279 462 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 FABP3P05413 133 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 CSN2P05814 226 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 HOXB5P09067 269 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 PRKACAP17612 351 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 CD1BP29016 333 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 C21orf33P30042 268 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-239ENST00000556315 NPBWR2P48146 333 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 RIDAP52758 137 aaKnown RBP3.68□□□□□ -1.82
ATXN3-239ENST00000556315 HCCSP53701 268 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 ATP1B3P54709 279 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 PITPNAQ00169 270 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 MFGE8Q08431 387 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-239ENST00000556315 ZNF816Q0VGE8 651 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-239ENST00000556315 UBE2V2Q15819 145 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 LRRC36Q1X8D7 754 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 ODF3L2Q3SX64 289 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 KRBOX4Q5JUW0 171 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 SLC35D3Q5M8T2 416 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 UTF1Q5T230 341 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 RNLSQ5VYX0 342 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 FAM53AQ6NSI3 398 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-239ENST00000556315 ZNF367Q7RTV3 350 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 GPR141Q7Z602 305 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 CATSPERDQ86XM0 798 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 ZNF679Q8IYX0 411 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 ELMOD2Q8IZ81 293 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 OR10A7Q8NGE5 316 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 OR9Q2Q8NGE9 314 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 OR10X1Q8NGY0 326 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 ASB17Q8WXJ9 295 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 ARPC1AQ92747 370 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 FLYWCH2Q96CP2 140 aaKnown RBP3.68□□□□□ -1.82
ATXN3-239ENST00000556315 BORCS8Q96FH0 119 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 URB1-AS1Q96HZ7 61 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 CNBD2Q96M20 576 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 ST6GALNAC5Q9BVH7 336 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 TMED9Q9BVK6 235 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 TOLLIPQ9H0E2 274 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 HIPK2Q9H2X6 1198 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 NCOR1P1Q9H4R4 102 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 LINC00574Q9H8X3 128 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 HMG20AQ9NP66 347 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 EXOSC4Q9NPD3 245 aaKnown RBP3.68□□□□□ -1.82
ATXN3-239ENST00000556315 RBFOX1Q9NWB1 397 aaKnown RBP3.68□□□□□ -1.82
ATXN3-239ENST00000556315 IDI2-AS1Q9NZ38 188 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 AASSQ9UDR5 926 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 MRM2Q9UI43 246 aaKnown RBP3.68□□□□□ -1.82
ATXN3-239ENST00000556315 STUB1Q9UNE7 303 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 COPS3Q9UNS2 423 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 PSG11Q9UQ72 335 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 MRPS28Q9Y2Q9 187 aaKnown RBP3.68□□□□□ -1.82
ATXN3-239ENST00000556315 TMEM14AQ9Y6G1 99 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 CSMD3Q7Z407 3707 aa3.68□□□□□ -1.82
ATXN3-239ENST00000556315 IGHV3-72A0A0B4J1Y9 119 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 CCDC160A6NGH7 325 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 USP17L23D6RBM5 183 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 NPIPB11E5RHQ5 1161 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 LOC110117498-PIK3R3F6TDL0 507 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 HSD17B6O14756 317 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 DEGS1O15121 323 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 PFDN1O60925 122 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 NOL3O60936 208 aaKnown RBP3.67□□□□□ -1.82
ATXN3-239ENST00000556315 GATBO75879 557 aaKnown RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms