RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 A0A1B0GU03 582 aa6.91□□□□□ -1.3
ATXN3-235ENST00000556082 ANKRD34BA5PLL1 514 aa6.91□□□□□ -1.3
ATXN3-235ENST00000556082 RNF212BA8MTL3 300 aa6.91□□□□□ -1.3
ATXN3-235ENST00000556082 C17orf100A8MU93 164 aa6.91□□□□□ -1.3
ATXN3-235ENST00000556082 LEUTXA8MZ59 168 aa6.91□□□□□ -1.3
ATXN3-235ENST00000556082 B8ZZF3 427 aa6.91□□□□□ -1.3
ATXN3-235ENST00000556082 F5H0A9 414 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-235ENST00000556082 ITGB1BP1O14713 200 aa6.91□□□□□ -1.3
ATXN3-235ENST00000556082 HSD17B6O14756 317 aa6.91□□□□□ -1.3
ATXN3-235ENST00000556082 ST8SIA3O43173 380 aa6.91□□□□□ -1.3
ATXN3-235ENST00000556082 HSPA12AO43301 675 aa6.91□□□□□ -1.3
ATXN3-235ENST00000556082 HBZP02008 142 aa6.91□□□□□ -1.3
ATXN3-235ENST00000556082 MBPP02686 304 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-235ENST00000556082 NMBP08949 121 aa6.91□□□□□ -1.3
ATXN3-235ENST00000556082 OR4A8P0C604 315 aa6.91□□□□□ -1.3
ATXN3-235ENST00000556082 CGB3P0DN86 165 aa6.91□□□□□ -1.3
ATXN3-235ENST00000556082 CGB7P0DN87 165 aa6.91□□□□□ -1.3
ATXN3-235ENST00000556082 HKR1P10072 659 aa6.91□□□□□ -1.3
ATXN3-235ENST00000556082 TPT1P13693 172 aaKnown RBP6.91□□□□□ -1.3
ATXN3-235ENST00000556082 MMP9P14780 707 aa6.91□□□□□ -1.3
ATXN3-235ENST00000556082 MUC1P15941 1255 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-235ENST00000556082 TNFRSF1AP19438 455 aa6.91□□□□□ -1.3
ATXN3-235ENST00000556082 IL2RGP31785 369 aa6.91□□□□□ -1.3
ATXN3-235ENST00000556082 P2RY1P47900 373 aa6.91□□□□□ -1.3
ATXN3-235ENST00000556082 CEBPDP49716 269 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-235ENST00000556082 FAM209AQ5JX71 171 aa6.91□□□□□ -1.3
ATXN3-235ENST00000556082 NCMAPQ5T1S8 102 aa6.91□□□□□ -1.3
ATXN3-235ENST00000556082 TEX36Q5VZQ5 186 aa6.91□□□□□ -1.3
ATXN3-235ENST00000556082 ZNF561Q8N587 486 aa6.91□□□□□ -1.3
ATXN3-235ENST00000556082 OR1L1Q8NH94 360 aa6.91□□□□□ -1.3
ATXN3-235ENST00000556082 LRRC20Q8TCA0 184 aa6.91□□□□□ -1.3
ATXN3-235ENST00000556082 IL1F10Q8WWZ1 152 aa6.91□□□□□ -1.3
ATXN3-235ENST00000556082 RNASE6Q93091 150 aaKnown RBP6.91□□□□□ -1.3
ATXN3-235ENST00000556082 LSM10Q969L4 123 aaKnown RBP6.91□□□□□ -1.3
ATXN3-235ENST00000556082 C11orf1Q9H5F2 150 aa6.91□□□□□ -1.3
ATXN3-235ENST00000556082 LINC00574Q9H8X3 128 aa6.91□□□□□ -1.3
ATXN3-235ENST00000556082 CYTL1Q9NRR1 136 aa6.91□□□□□ -1.3
ATXN3-235ENST00000556082 SH3BGRL2Q9UJC5 107 aa6.91□□□□□ -1.3
ATXN3-235ENST00000556082 GAB2Q9UQC2 676 aa6.91□□□□□ -1.3
ATXN3-235ENST00000556082 POMT1Q9Y6A1 747 aa6.91□□□□□ -1.3
ATXN3-235ENST00000556082 LOC400499M0QZD8 3231 aa6.91□□□□□ -1.3
ATXN3-235ENST00000556082 ZFHX4Q86UP3 3567 aa6.9□□□□□ -1.3
ATXN3-235ENST00000556082 PRRC2CQ9Y520 2896 aaKnown RBP6.9□□□□□ -1.3
ATXN3-235ENST00000556082 A0A1B0GW55 424 aa6.9□□□□□ -1.3
ATXN3-235ENST00000556082 ODAMA1E959 279 aa6.9□□□□□ -1.3
ATXN3-235ENST00000556082 NKX2-6A6NCS4 301 aa6.9□□□□□ -1.3
ATXN3-235ENST00000556082 LRRC30A6NM36 301 aa6.9□□□□□ -1.3
ATXN3-235ENST00000556082 K7EPK0 472 aa6.9□□□□□ -1.3
ATXN3-235ENST00000556082 SPINT2O43291 252 aa6.9□□□□□ -1.3
ATXN3-235ENST00000556082 PITX3O75364 302 aa6.9□□□□□ -1.3
ATXN3-235ENST00000556082 GAPDHP04406 335 aaKnown RBP6.9□□□□□ -1.3
ATXN3-235ENST00000556082 OR8U9P0C7N5 309 aa6.9□□□□□ -1.3
ATXN3-235ENST00000556082 DUX4L2P0CJ85 424 aa6.9□□□□□ -1.3
ATXN3-235ENST00000556082 DUX4L3P0CJ86 424 aa6.9□□□□□ -1.3
ATXN3-235ENST00000556082 DUX4L4P0CJ87 422 aa6.9□□□□□ -1.3
ATXN3-235ENST00000556082 DUX4L5P0CJ88 424 aa6.9□□□□□ -1.3
ATXN3-235ENST00000556082 DUX4L6P0CJ89 424 aa6.9□□□□□ -1.3
ATXN3-235ENST00000556082 DUX4L7P0CJ90 424 aa6.9□□□□□ -1.3
ATXN3-235ENST00000556082 RPL12P30050 165 aaKnown RBP6.9□□□□□ -1.3
ATXN3-235ENST00000556082 GABRA2P47869 451 aa6.9□□□□□ -1.3
ATXN3-235ENST00000556082 GLIPR1P48060 266 aa6.9□□□□□ -1.3
ATXN3-235ENST00000556082 P2RX3P56373 397 aa6.9□□□□□ -1.3
ATXN3-235ENST00000556082 EIF4EBP1Q13541 118 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-235ENST00000556082 EFNB3Q15768 340 aa6.9□□□□□ -1.3
ATXN3-235ENST00000556082 TMEM30BQ3MIR4 351 aa6.9□□□□□ -1.3
ATXN3-235ENST00000556082 SPRNQ5BIV9 151 aa6.9□□□□□ -1.3
ATXN3-235ENST00000556082 STUMQ69YW2 141 aa6.9□□□□□ -1.3
ATXN3-235ENST00000556082 BAP18Q8IXM2 172 aa6.9□□□□□ -1.3
ATXN3-235ENST00000556082 PDZD9Q8IXQ8 264 aa6.9□□□□□ -1.3
ATXN3-235ENST00000556082 ZNF645Q8N7E2 425 aa6.9□□□□□ -1.3
ATXN3-235ENST00000556082 OR8U1Q8NH10 309 aa6.9□□□□□ -1.3
ATXN3-235ENST00000556082 LRRC46Q96FV0 321 aa6.9□□□□□ -1.3
ATXN3-235ENST00000556082 ZNF471Q9BX82 626 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-235ENST00000556082 EGLN1Q9GZT9 426 aa6.9□□□□□ -1.3
ATXN3-235ENST00000556082 DNTTIP1Q9H147 329 aa6.9□□□□□ -1.3
ATXN3-235ENST00000556082 PLEKHF2Q9H8W4 249 aa6.9□□□□□ -1.3
ATXN3-235ENST00000556082 OR6C3Q9NZP0 311 aa6.9□□□□□ -1.3
ATXN3-235ENST00000556082 DUX4Q9UBX2 424 aa6.9□□□□□ -1.3
ATXN3-235ENST00000556082 FRYQ5TBA9 3013 aa6.9□□□□□ -1.3
ATXN3-235ENST00000556082 PRR14LQ5THK1 2151 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 TMEM8BA6NDV4 472 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 MSGN1A6NI15 193 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 SHISA9B4DS77 424 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 F2RL2O00254 374 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 CCL21O00585 134 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 GPR137BO60478 399 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 YPEL1O60688 119 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 JTBO76095 146 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 SPDEFO95238 335 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 SERPINE2P07093 398 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 IRF2P14316 349 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 ID4P47928 161 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 S100A10P60903 97 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 GNMTQ14749 295 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 BEX5Q5H9J7 111 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 EIF5AL1Q6IS14 154 aaKnown RBP6.89□□□□□ -1.31
ATXN3-235ENST00000556082 ALKAL2Q6UX46 152 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 UNQ6494/PRO21346Q6UXR6 183 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 MEX3BQ6ZN04 569 aaKnown RBP6.89□□□□□ -1.31
ATXN3-235ENST00000556082 ZNF66Q6ZN08 573 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms