RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 C15orf65H3BRN8 121 aa8.42□□□□□ -1.06
EFCAB11-209ENST00000556005 CCL21O00585 134 aa8.42□□□□□ -1.06
EFCAB11-209ENST00000556005 CYB5R3P00387 301 aaPredicted RBP8.42□□□□□ -1.06
EFCAB11-209ENST00000556005 C1QTNF9P0C862 333 aa8.42□□□□□ -1.06
EFCAB11-209ENST00000556005 SFTPCP11686 197 aa8.42□□□□□ -1.06
EFCAB11-209ENST00000556005 CHRNB4P30926 498 aa8.42□□□□□ -1.06
EFCAB11-209ENST00000556005 CD80P33681 288 aa8.42□□□□□ -1.06
EFCAB11-209ENST00000556005 PPP1CCP36873 323 aaKnown RBP8.42□□□□□ -1.06
EFCAB11-209ENST00000556005 P2RX3P56373 397 aa8.42□□□□□ -1.06
EFCAB11-209ENST00000556005 EDDM3BP56851 147 aa8.42□□□□□ -1.06
EFCAB11-209ENST00000556005 CCL8P80075 99 aa8.42□□□□□ -1.06
EFCAB11-209ENST00000556005 ID3Q02535 119 aa8.42□□□□□ -1.06
EFCAB11-209ENST00000556005 CATR1Q13166 79 aa8.42□□□□□ -1.06
EFCAB11-209ENST00000556005 TOR2AQ5JU69 321 aa8.42□□□□□ -1.06
EFCAB11-209ENST00000556005 NCMAPQ5T1S8 102 aa8.42□□□□□ -1.06
EFCAB11-209ENST00000556005 DMBX1Q8NFW5 382 aa8.42□□□□□ -1.06
EFCAB11-209ENST00000556005 RFESDQ8TAC1 157 aa8.42□□□□□ -1.06
EFCAB11-209ENST00000556005 FAM216AQ8WUB2 273 aa8.42□□□□□ -1.06
EFCAB11-209ENST00000556005 EDARADDQ8WWZ3 215 aa8.42□□□□□ -1.06
EFCAB11-209ENST00000556005 SDSLQ96GA7 329 aa8.42□□□□□ -1.06
EFCAB11-209ENST00000556005 COQ3Q9NZJ6 369 aa8.42□□□□□ -1.06
EFCAB11-209ENST00000556005 FBXL17Q9UF56 701 aa8.42□□□□□ -1.06
EFCAB11-209ENST00000556005 NDRG3Q9UGV2 375 aa8.42□□□□□ -1.06
EFCAB11-209ENST00000556005 RNF150Q9ULK6 438 aa8.42□□□□□ -1.06
EFCAB11-209ENST00000556005 WRBO00258 174 aa8.41□□□□□ -1.06
EFCAB11-209ENST00000556005 MMP9P14780 707 aa8.41□□□□□ -1.06
EFCAB11-209ENST00000556005 POLR2GP62487 172 aaKnown RBP eCLIP8.41□□□□□ -1.06
EFCAB11-209ENST00000556005 VAMP2P63027 116 aa8.41□□□□□ -1.06
EFCAB11-209ENST00000556005 TLE1Q04724 770 aa8.41□□□□□ -1.06
EFCAB11-209ENST00000556005 FBXL19-AS1Q494R0 122 aa8.41□□□□□ -1.06
EFCAB11-209ENST00000556005 CXorf66Q5JRM2 361 aaPredicted RBP8.41□□□□□ -1.06
EFCAB11-209ENST00000556005 FAM209AQ5JX71 171 aa8.41□□□□□ -1.06
EFCAB11-209ENST00000556005 FAM201AQ5SY85 155 aa8.41□□□□□ -1.06
EFCAB11-209ENST00000556005 RPL7L1Q6DKI1 246 aaKnown RBP8.41□□□□□ -1.06
EFCAB11-209ENST00000556005 HSD17B13Q7Z5P4 300 aaPredicted RBP8.41□□□□□ -1.06
EFCAB11-209ENST00000556005 OR2C3Q8N628 320 aa8.41□□□□□ -1.06
EFCAB11-209ENST00000556005 UBAC2Q8NBM4 344 aa8.41□□□□□ -1.06
EFCAB11-209ENST00000556005 TMED6Q8WW62 240 aa8.41□□□□□ -1.06
EFCAB11-209ENST00000556005 GPR146Q96CH1 333 aa8.41□□□□□ -1.06
EFCAB11-209ENST00000556005 REG4Q9BYZ8 158 aa8.41□□□□□ -1.06
EFCAB11-209ENST00000556005 EGLN1Q9GZT9 426 aa8.41□□□□□ -1.06
EFCAB11-209ENST00000556005 FAM234AQ9H0X4 552 aa8.41□□□□□ -1.06
EFCAB11-209ENST00000556005 ZNF665Q9H7R5 613 aa8.41□□□□□ -1.06
EFCAB11-209ENST00000556005 JPT1Q9UK76 154 aa8.41□□□□□ -1.06
EFCAB11-209ENST00000556005 BORCS7-ASMTA0A0B4J1R7 106 aa8.4□□□□□ -1.06
EFCAB11-209ENST00000556005 IGHV3-43A0A0B4J1X8 118 aa8.4□□□□□ -1.06
EFCAB11-209ENST00000556005 PITX3O75364 302 aa8.4□□□□□ -1.06
EFCAB11-209ENST00000556005 IGHV3-43DP0DP04 118 aa8.4□□□□□ -1.06
EFCAB11-209ENST00000556005 AKR1C2P52895 323 aa8.4□□□□□ -1.06
EFCAB11-209ENST00000556005 ZNF585BQ52M93 769 aa8.4□□□□□ -1.06
EFCAB11-209ENST00000556005 KIAA2026Q5HYC2 2103 aa8.4□□□□□ -1.06
EFCAB11-209ENST00000556005 TEX36Q5VZQ5 186 aa8.4□□□□□ -1.06
EFCAB11-209ENST00000556005 STUMQ69YW2 141 aa8.4□□□□□ -1.06
EFCAB11-209ENST00000556005 EIF4E3Q8N5X7 224 aaKnown RBP8.4□□□□□ -1.06
EFCAB11-209ENST00000556005 TCTEX1D1Q8N7M0 179 aa8.4□□□□□ -1.06
EFCAB11-209ENST00000556005 RNASE6Q93091 150 aaKnown RBP8.4□□□□□ -1.06
EFCAB11-209ENST00000556005 C14orf79Q96F83 325 aa8.4□□□□□ -1.06
EFCAB11-209ENST00000556005 LRRC46Q96FV0 321 aa8.4□□□□□ -1.06
EFCAB11-209ENST00000556005 PLPPR2Q96GM1 343 aa8.4□□□□□ -1.06
EFCAB11-209ENST00000556005 DCTN5Q9BTE1 182 aa8.4□□□□□ -1.06
EFCAB11-209ENST00000556005 SMIM3Q9BZL3 60 aa8.4□□□□□ -1.06
EFCAB11-209ENST00000556005 SLC25A31Q9H0C2 315 aa8.4□□□□□ -1.06
EFCAB11-209ENST00000556005 GNG12Q9UBI6 72 aa8.4□□□□□ -1.06
EFCAB11-209ENST00000556005 ARID1AO14497 2285 aa8.4□□□□□ -1.06
EFCAB11-209ENST00000556005 TLN1Q9Y490 2541 aaKnown RBP8.4□□□□□ -1.06
EFCAB11-209ENST00000556005 DEFB108AA8MXU0 73 aa8.4□□□□□ -1.07
EFCAB11-209ENST00000556005 SHISA9B4DS77 424 aa8.4□□□□□ -1.07
EFCAB11-209ENST00000556005 ATXN7O15265 892 aaPredicted RBP8.4□□□□□ -1.07
EFCAB11-209ENST00000556005 FGF16O43320 207 aa8.4□□□□□ -1.07
EFCAB11-209ENST00000556005 SSSCA1O60232 199 aa8.4□□□□□ -1.07
EFCAB11-209ENST00000556005 YPEL1O60688 119 aa8.4□□□□□ -1.07
EFCAB11-209ENST00000556005 ATG12O94817 140 aa8.4□□□□□ -1.07
EFCAB11-209ENST00000556005 IGKV1-39P01597 117 aa8.4□□□□□ -1.07
EFCAB11-209ENST00000556005 IGKV1D-39P04432 117 aa8.4□□□□□ -1.07
EFCAB11-209ENST00000556005 CD3EP07766 207 aa8.4□□□□□ -1.07
EFCAB11-209ENST00000556005 EPHA1P21709 976 aa8.4□□□□□ -1.07
EFCAB11-209ENST00000556005 ID4P47928 161 aa8.4□□□□□ -1.07
EFCAB11-209ENST00000556005 CAV2P51636 162 aa8.4□□□□□ -1.07
EFCAB11-209ENST00000556005 MORN2Q502X0 79 aa8.4□□□□□ -1.07
EFCAB11-209ENST00000556005 ZNF66Q6ZN08 573 aa8.4□□□□□ -1.07
EFCAB11-209ENST00000556005 C1orf87Q8N0U7 546 aa8.4□□□□□ -1.07
EFCAB11-209ENST00000556005 FGFRL1Q8N441 504 aa8.4□□□□□ -1.07
EFCAB11-209ENST00000556005 DEFB108BQ8NET1 73 aa8.4□□□□□ -1.07
EFCAB11-209ENST00000556005 YPEL2Q96QA6 119 aa8.4□□□□□ -1.07
EFCAB11-209ENST00000556005 AGMATQ9BSE5 352 aa8.4□□□□□ -1.07
EFCAB11-209ENST00000556005 MAGT1Q9H0U3 335 aa8.4□□□□□ -1.07
EFCAB11-209ENST00000556005 MS4A5Q9H3V2 200 aa8.4□□□□□ -1.07
EFCAB11-209ENST00000556005 C11orf1Q9H5F2 150 aa8.4□□□□□ -1.07
EFCAB11-209ENST00000556005 SAP30LQ9HAJ7 183 aa8.4□□□□□ -1.07
EFCAB11-209ENST00000556005 BARX1Q9HBU1 254 aaPredicted RBP8.4□□□□□ -1.07
EFCAB11-209ENST00000556005 FAM212BQ9NTI7 297 aaPredicted RBP8.4□□□□□ -1.07
EFCAB11-209ENST00000556005 LYRM2Q9NU23 88 aaPredicted RBP8.4□□□□□ -1.07
EFCAB11-209ENST00000556005 TRGV10A0A0A0MS01 117 aa8.39□□□□□ -1.07
EFCAB11-209ENST00000556005 TRAV38-1A0A0B4J264 116 aa8.39□□□□□ -1.07
EFCAB11-209ENST00000556005 A0A0G2JRQ6 117 aa8.39□□□□□ -1.07
EFCAB11-209ENST00000556005 MEX3AA1L020 520 aaKnown RBP8.39□□□□□ -1.07
EFCAB11-209ENST00000556005 FAM90A27PA6NNH2 459 aa8.39□□□□□ -1.07
EFCAB11-209ENST00000556005 F2RL2O00254 374 aa8.39□□□□□ -1.07
EFCAB11-209ENST00000556005 CHST1O43916 411 aa8.39□□□□□ -1.07
EFCAB11-209ENST00000556005 CLDN1O95832 211 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms