RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 RPS27AP62979 156 aaKnown RBP9.94□□□□□ -0.82
HNRNPC-221ENST00000555883 DGCR2P98153 550 aa9.94□□□□□ -0.82
HNRNPC-221ENST00000555883 FHL3Q13643 280 aa9.94□□□□□ -0.82
HNRNPC-221ENST00000555883 MMDQ15546 238 aa9.94□□□□□ -0.82
HNRNPC-221ENST00000555883 HMGN3Q15651 99 aa9.94□□□□□ -0.82
HNRNPC-221ENST00000555883 ZNF833PQ6ZTB9 187 aa9.94□□□□□ -0.82
HNRNPC-221ENST00000555883 MOB1BQ7L9L4 216 aa9.94□□□□□ -0.82
HNRNPC-221ENST00000555883 LRRTM1Q86UE6 522 aa9.94□□□□□ -0.82
HNRNPC-221ENST00000555883 OR5M8Q8NGP6 311 aa9.94□□□□□ -0.82
HNRNPC-221ENST00000555883 KCNG3Q8TAE7 436 aa9.94□□□□□ -0.82
HNRNPC-221ENST00000555883 FAM46BQ96A09 425 aa9.94□□□□□ -0.82
HNRNPC-221ENST00000555883 TMEM59Q9BXS4 323 aa9.94□□□□□ -0.82
HNRNPC-221ENST00000555883 ZNF107Q9UII5 783 aaPredicted RBP9.94□□□□□ -0.82
HNRNPC-221ENST00000555883 LSM2Q9Y333 95 aaKnown RBP9.94□□□□□ -0.82
HNRNPC-221ENST00000555883 ITGB1BP1O14713 200 aa9.93□□□□□ -0.82
HNRNPC-221ENST00000555883 NDUFA3O95167 84 aa9.93□□□□□ -0.82
HNRNPC-221ENST00000555883 BPNT1O95861 308 aa9.93□□□□□ -0.82
HNRNPC-221ENST00000555883 NAPSAO96009 420 aa9.93□□□□□ -0.82
HNRNPC-221ENST00000555883 UCHL1P09936 223 aa9.93□□□□□ -0.82
HNRNPC-221ENST00000555883 SRMP19623 302 aa9.93□□□□□ -0.82
HNRNPC-221ENST00000555883 PPP1CCP36873 323 aaKnown RBP9.93□□□□□ -0.82
HNRNPC-221ENST00000555883 ACTBP60709 375 aa9.93□□□□□ -0.82
HNRNPC-221ENST00000555883 RUNX1Q01196 453 aa9.93□□□□□ -0.82
HNRNPC-221ENST00000555883 GABPB1Q06547 395 aaPredicted RBP9.93□□□□□ -0.82
HNRNPC-221ENST00000555883 GNMTQ14749 295 aa9.93□□□□□ -0.82
HNRNPC-221ENST00000555883 SPHARQ15513 63 aa9.93□□□□□ -0.82
HNRNPC-221ENST00000555883 DEFB121Q5J5C9 76 aa9.93□□□□□ -0.82
HNRNPC-221ENST00000555883 C9orf66Q5T8R8 295 aa9.93□□□□□ -0.82
HNRNPC-221ENST00000555883 ZNF880Q6PDB4 577 aa9.93□□□□□ -0.82
HNRNPC-221ENST00000555883 SVOPQ8N4V2 548 aa9.93□□□□□ -0.82
HNRNPC-221ENST00000555883 NPBQ8NG41 125 aa9.93□□□□□ -0.82
HNRNPC-221ENST00000555883 OR2AK2Q8NG84 335 aa9.93□□□□□ -0.82
HNRNPC-221ENST00000555883 OR52L2PQ8NGH6 319 aa9.93□□□□□ -0.82
HNRNPC-221ENST00000555883 UBE2E2Q96LR5 201 aa9.93□□□□□ -0.82
HNRNPC-221ENST00000555883 KCTD7Q96MP8 289 aa9.93□□□□□ -0.82
HNRNPC-221ENST00000555883 NABP2Q9BQ15 211 aa9.93□□□□□ -0.82
HNRNPC-221ENST00000555883 SULT4A1Q9BR01 284 aa9.93□□□□□ -0.82
HNRNPC-221ENST00000555883 RIMS4Q9H426 269 aaPredicted RBP9.93□□□□□ -0.82
HNRNPC-221ENST00000555883 PIPOXQ9P0Z9 390 aa9.93□□□□□ -0.82
HNRNPC-221ENST00000555883 ABRACLQ9P1F3 81 aa9.93□□□□□ -0.82
HNRNPC-221ENST00000555883 STEAP1Q9UHE8 339 aa9.93□□□□□ -0.82
HNRNPC-221ENST00000555883 SAA2-SAA4A0A096LPE2 208 aa9.92□□□□□ -0.82
HNRNPC-221ENST00000555883 TRBV6-6A0A0A6YYG2 114 aa9.92□□□□□ -0.82
HNRNPC-221ENST00000555883 TMEM14DPA8MWL7 114 aa9.92□□□□□ -0.82
HNRNPC-221ENST00000555883 NBR2O15453 112 aa9.92□□□□□ -0.82
HNRNPC-221ENST00000555883 IGLV1-40P01703 118 aa9.92□□□□□ -0.82
HNRNPC-221ENST00000555883 SAA2P0DJI9 122 aaPredicted RBP9.92□□□□□ -0.82
HNRNPC-221ENST00000555883 HTR2CP28335 458 aa9.92□□□□□ -0.82
HNRNPC-221ENST00000555883 RANBP1P43487 201 aa9.92□□□□□ -0.82
HNRNPC-221ENST00000555883 CRIP2P52943 208 aaPredicted RBP9.92□□□□□ -0.82
HNRNPC-221ENST00000555883 QRFPP83859 136 aa9.92□□□□□ -0.82
HNRNPC-221ENST00000555883 CD69Q07108 199 aa9.92□□□□□ -0.82
HNRNPC-221ENST00000555883 INSL4Q14641 139 aa9.92□□□□□ -0.82
HNRNPC-221ENST00000555883 HSD17B12Q53GQ0 312 aa9.92□□□□□ -0.82
HNRNPC-221ENST00000555883 NKAPLQ5M9Q1 402 aa9.92□□□□□ -0.82
HNRNPC-221ENST00000555883 RBM48Q5RL73 367 aaKnown RBP9.92□□□□□ -0.82
HNRNPC-221ENST00000555883 LCNL1Q6ZST4 164 aa9.92□□□□□ -0.82
HNRNPC-221ENST00000555883 OR6M1Q8NGM8 313 aa9.92□□□□□ -0.82
HNRNPC-221ENST00000555883 ZNF251Q9BRH9 671 aa9.92□□□□□ -0.82
HNRNPC-221ENST00000555883 MRPL20Q9BYC9 149 aaKnown RBP9.92□□□□□ -0.82
HNRNPC-221ENST00000555883 IFI27L2Q9H2X8 130 aa9.92□□□□□ -0.82
HNRNPC-221ENST00000555883 OR51J1Q9H342 316 aa9.92□□□□□ -0.82
HNRNPC-221ENST00000555883 MGAT4AQ9UM21 535 aa9.92□□□□□ -0.82
HNRNPC-221ENST00000555883 IGHV7-81A0A0B4J1V7 117 aa9.91□□□□□ -0.82
HNRNPC-221ENST00000555883 RAB29O14966 203 aa9.91□□□□□ -0.82
HNRNPC-221ENST00000555883 PSMA1P25786 263 aaKnown RBP9.91□□□□□ -0.82
HNRNPC-221ENST00000555883 INSL3P51460 131 aa9.91□□□□□ -0.82
HNRNPC-221ENST00000555883 UNC119Q13432 240 aa9.91□□□□□ -0.82
HNRNPC-221ENST00000555883 IRF3Q14653 427 aa9.91□□□□□ -0.82
HNRNPC-221ENST00000555883 TRAM1Q15629 374 aa9.91□□□□□ -0.82
HNRNPC-221ENST00000555883 C5orf64Q2M2E5 130 aa9.91□□□□□ -0.82
HNRNPC-221ENST00000555883 FAM27D1Q5T7N8 215 aa9.91□□□□□ -0.82
HNRNPC-221ENST00000555883 C6orf201Q7Z4U5 140 aa9.91□□□□□ -0.82
HNRNPC-221ENST00000555883 FAM89BQ8N5H3 189 aa9.91□□□□□ -0.82
HNRNPC-221ENST00000555883 MINDY2Q8NBR6 621 aa9.91□□□□□ -0.82
HNRNPC-221ENST00000555883 DUX3Q96PT4 197 aa9.91□□□□□ -0.82
HNRNPC-221ENST00000555883 FAAP24Q9BTP7 215 aa9.91□□□□□ -0.82
HNRNPC-221ENST00000555883 TMED9Q9BVK6 235 aa9.91□□□□□ -0.82
HNRNPC-221ENST00000555883 ISYNA1Q9NPH2 558 aa9.91□□□□□ -0.82
HNRNPC-221ENST00000555883 SCN3BQ9NY72 215 aa9.91□□□□□ -0.82
HNRNPC-221ENST00000555883 SLC23A1Q9UHI7 598 aa9.91□□□□□ -0.82
HNRNPC-221ENST00000555883 HSF4Q9ULV5 492 aa9.91□□□□□ -0.82
HNRNPC-221ENST00000555883 TENM3Q9P273 2699 aa9.91□□□□□ -0.82
HNRNPC-221ENST00000555883 KMT2CQ8NEZ4 4911 aaKnown RBP9.91□□□□□ -0.82
HNRNPC-221ENST00000555883 DNAH9Q9NYC9 4486 aa9.9□□□□□ -0.82
HNRNPC-221ENST00000555883 OR5H14A6NHG9 310 aa9.9□□□□□ -0.82
HNRNPC-221ENST00000555883 I3L521 148 aa9.9□□□□□ -0.82
HNRNPC-221ENST00000555883 ATP6V0E1O15342 81 aa9.9□□□□□ -0.82
HNRNPC-221ENST00000555883 RBBP9O75884 186 aa9.9□□□□□ -0.82
HNRNPC-221ENST00000555883 OR8U8P0C7N1 319 aa9.9□□□□□ -0.82
HNRNPC-221ENST00000555883 NHLRC4P0CG21 123 aaPredicted RBP9.9□□□□□ -0.82
HNRNPC-221ENST00000555883 SLC2A2P11168 524 aaPredicted RBP9.9□□□□□ -0.82
HNRNPC-221ENST00000555883 MC5RP33032 325 aa9.9□□□□□ -0.82
HNRNPC-221ENST00000555883 TPBGQ13641 420 aa9.9□□□□□ -0.82
HNRNPC-221ENST00000555883 KIAA0141Q14154 515 aaPredicted RBP9.9□□□□□ -0.82
HNRNPC-221ENST00000555883 DEFB136Q30KP8 78 aa9.9□□□□□ -0.82
HNRNPC-221ENST00000555883 OR10K2Q6IF99 312 aa9.9□□□□□ -0.82
HNRNPC-221ENST00000555883 LIN54Q6MZP7 749 aa9.9□□□□□ -0.82
HNRNPC-221ENST00000555883 TMEM65Q6PI78 240 aa9.9□□□□□ -0.82
HNRNPC-221ENST00000555883 CEACAM19Q7Z692 300 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms