RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 RBM7Q9Y580 266 aaKnown RBP13.69□□□□□ -0.22
TUBB3-209ENST00000555609 SEC14L6B5MCN3 397 aa13.68□□□□□ -0.22
TUBB3-209ENST00000555609 CLDN34H7C241 214 aa13.68□□□□□ -0.22
TUBB3-209ENST00000555609 GALR2O43603 387 aaPredicted RBP13.68□□□□□ -0.22
TUBB3-209ENST00000555609 LILRA1O75019 489 aa13.68□□□□□ -0.22
TUBB3-209ENST00000555609 RHBDL1O75783 438 aa13.68□□□□□ -0.22
TUBB3-209ENST00000555609 NXPH3O95157 252 aa13.68□□□□□ -0.22
TUBB3-209ENST00000555609 PGA5P0DJD9 388 aa13.68□□□□□ -0.22
TUBB3-209ENST00000555609 MEOX1P50221 254 aa13.68□□□□□ -0.22
TUBB3-209ENST00000555609 CEBPGP53567 150 aa13.68□□□□□ -0.22
TUBB3-209ENST00000555609 CD81P60033 236 aa13.68□□□□□ -0.22
TUBB3-209ENST00000555609 MDP1Q86V88 176 aa13.68□□□□□ -0.22
TUBB3-209ENST00000555609 LILRB2Q8N423 598 aa13.68□□□□□ -0.22
TUBB3-209ENST00000555609 HES7Q9BYE0 225 aa13.68□□□□□ -0.22
TUBB3-209ENST00000555609 KCNIP1Q9NZI2 227 aa13.68□□□□□ -0.22
TUBB3-209ENST00000555609 MIOXQ9UGB7 285 aa13.68□□□□□ -0.22
TUBB3-209ENST00000555609 PRSS50Q9UI38 385 aa13.68□□□□□ -0.22
TUBB3-209ENST00000555609 H3BP45 60 aa13.67□□□□□ -0.22
TUBB3-209ENST00000555609 MBP02144 154 aa13.67□□□□□ -0.22
TUBB3-209ENST00000555609 RAC2P15153 192 aa13.67□□□□□ -0.22
TUBB3-209ENST00000555609 S100A2P29034 98 aa13.67□□□□□ -0.22
TUBB3-209ENST00000555609 TCF15Q12870 199 aa13.67□□□□□ -0.22
TUBB3-209ENST00000555609 TMEM14EPQ6UXP3 125 aa13.67□□□□□ -0.22
TUBB3-209ENST00000555609 C1orf87Q8N0U7 546 aa13.67□□□□□ -0.22
TUBB3-209ENST00000555609 SCCPDHQ8NBX0 429 aa13.67□□□□□ -0.22
TUBB3-209ENST00000555609 MDS2Q8NDY4 140 aa13.67□□□□□ -0.22
TUBB3-209ENST00000555609 CA5BP1Q8WTZ4 195 aa13.67□□□□□ -0.22
TUBB3-209ENST00000555609 FER1L6-AS2Q96M78 137 aa13.67□□□□□ -0.22
TUBB3-209ENST00000555609 AGMATQ9BSE5 352 aa13.67□□□□□ -0.22
TUBB3-209ENST00000555609 SDF2L1Q9HCN8 221 aa13.67□□□□□ -0.22
TUBB3-209ENST00000555609 OR14J1Q9UGF5 321 aa13.67□□□□□ -0.22
TUBB3-209ENST00000555609 PPP1R3CQ9UQK1 317 aa13.67□□□□□ -0.22
TUBB3-209ENST00000555609 LINC00587B1AMM8 73 aa13.67□□□□□ -0.22
TUBB3-209ENST00000555609 MT-CO3P00414 261 aa13.67□□□□□ -0.22
TUBB3-209ENST00000555609 OPN1MWP04001 364 aa13.67□□□□□ -0.22
TUBB3-209ENST00000555609 CXCL1P09341 107 aa13.67□□□□□ -0.22
TUBB3-209ENST00000555609 FBP1P09467 338 aa13.67□□□□□ -0.22
TUBB3-209ENST00000555609 METTL15P1P0C7V9 234 aa13.67□□□□□ -0.22
TUBB3-209ENST00000555609 OPN1MW2P0DN77 364 aa13.67□□□□□ -0.22
TUBB3-209ENST00000555609 OPN1MW3P0DN78 364 aa13.67□□□□□ -0.22
TUBB3-209ENST00000555609 RAB11AP62491 216 aa13.67□□□□□ -0.22
TUBB3-209ENST00000555609 ZNF645Q8N7E2 425 aa13.67□□□□□ -0.22
TUBB3-209ENST00000555609 TAF15Q92804 592 aaKnown RBP eCLIP13.67□□□□□ -0.22
TUBB3-209ENST00000555609 RCC1LQ96I51 464 aaKnown RBP13.67□□□□□ -0.22
TUBB3-209ENST00000555609 RSG1Q9BU20 258 aa13.67□□□□□ -0.22
TUBB3-209ENST00000555609 GAR1Q9NY12 217 aaKnown RBP13.67□□□□□ -0.22
TUBB3-209ENST00000555609 DOK5Q9P104 306 aa13.67□□□□□ -0.22
TUBB3-209ENST00000555609 KCNS2Q9ULS6 477 aa13.67□□□□□ -0.22
TUBB3-209ENST00000555609 R4GN57 208 aa13.67□□□□□ -0.22
TUBB3-209ENST00000555609 GPR179Q6PRD1 2367 aa13.67□□□□□ -0.22
TUBB3-209ENST00000555609 SP9P0CG40 484 aa13.66□□□□□ -0.22
TUBB3-209ENST00000555609 IAPPP10997 89 aa13.66□□□□□ -0.22
TUBB3-209ENST00000555609 CD46P15529 392 aa13.66□□□□□ -0.22
TUBB3-209ENST00000555609 CEACAM6P40199 344 aa13.66□□□□□ -0.22
TUBB3-209ENST00000555609 ERVFRD-1P60508 538 aa13.66□□□□□ -0.22
TUBB3-209ENST00000555609 ARL16Q0P5N6 197 aa13.66□□□□□ -0.22
TUBB3-209ENST00000555609 P4HA3Q7Z4N8 544 aa13.66□□□□□ -0.22
TUBB3-209ENST00000555609 HAPLN4Q86UW8 402 aa13.66□□□□□ -0.22
TUBB3-209ENST00000555609 FGFRL1Q8N441 504 aa13.66□□□□□ -0.22
TUBB3-209ENST00000555609 DRAM1Q8N682 238 aa13.66□□□□□ -0.22
TUBB3-209ENST00000555609 GGACTQ9BVM4 153 aa13.66□□□□□ -0.22
TUBB3-209ENST00000555609 PLA2G3Q9NZ20 509 aa13.66□□□□□ -0.22
TUBB3-209ENST00000555609 DMRT1Q9Y5R6 373 aa13.66□□□□□ -0.22
TUBB3-209ENST00000555609 TRBV24-1A0A075B6N3 115 aa13.65□□□□□ -0.22
TUBB3-209ENST00000555609 TMEM30CPA0ZSE6 113 aa13.65□□□□□ -0.22
TUBB3-209ENST00000555609 IQCF6A8MYZ5 107 aa13.65□□□□□ -0.22
TUBB3-209ENST00000555609 SIRPB1O00241 398 aa13.65□□□□□ -0.22
TUBB3-209ENST00000555609 NXPH2O95156 264 aa13.65□□□□□ -0.22
TUBB3-209ENST00000555609 IGHV2-70P01814 119 aa13.65□□□□□ -0.22
TUBB3-209ENST00000555609 NDUFA6P56556 154 aa13.65□□□□□ -0.22
TUBB3-209ENST00000555609 PPP1CBP62140 327 aa13.65□□□□□ -0.22
TUBB3-209ENST00000555609 TGFBR3Q03167 851 aa13.65□□□□□ -0.22
TUBB3-209ENST00000555609 SLC38A11Q08AI6 406 aa13.65□□□□□ -0.22
TUBB3-209ENST00000555609 ZNF726P1Q15940 193 aa13.65□□□□□ -0.22
TUBB3-209ENST00000555609 WDYHV1Q96HA8 205 aa13.65□□□□□ -0.22
TUBB3-209ENST00000555609 FAM210BQ96KR6 192 aa13.65□□□□□ -0.22
TUBB3-209ENST00000555609 OR4C12Q96R67 309 aa13.65□□□□□ -0.22
TUBB3-209ENST00000555609 MRPL37Q9BZE1 423 aaKnown RBP13.65□□□□□ -0.22
TUBB3-209ENST00000555609 CDH20Q9HBT6 801 aa13.65□□□□□ -0.22
TUBB3-209ENST00000555609 FOXJ2Q9P0K8 574 aa13.65□□□□□ -0.22
TUBB3-209ENST00000555609 HSPB7Q9UBY9 170 aa13.65□□□□□ -0.22
TUBB3-209ENST00000555609 A0A1W2PR80 420 aa13.65□□□□□ -0.22
TUBB3-209ENST00000555609 ARGFXA6NJG6 315 aa13.65□□□□□ -0.22
TUBB3-209ENST00000555609 ZNF891A8MT65 544 aaPredicted RBP13.65□□□□□ -0.22
TUBB3-209ENST00000555609 SMPD2O60906 423 aa13.65□□□□□ -0.22
TUBB3-209ENST00000555609 LY86O95711 162 aa13.65□□□□□ -0.22
TUBB3-209ENST00000555609 TUBG1P23258 451 aa13.65□□□□□ -0.22
TUBB3-209ENST00000555609 TNFRSF9Q07011 255 aa13.65□□□□□ -0.22
TUBB3-209ENST00000555609 CATR1Q13166 79 aa13.65□□□□□ -0.22
TUBB3-209ENST00000555609 NCMAPQ5T1S8 102 aa13.65□□□□□ -0.22
TUBB3-209ENST00000555609 SLC35E4Q6ICL7 350 aa13.65□□□□□ -0.22
TUBB3-209ENST00000555609 LCN15Q6UWW0 184 aa13.65□□□□□ -0.22
TUBB3-209ENST00000555609 LINC00696Q6ZRV3 163 aa13.65□□□□□ -0.22
TUBB3-209ENST00000555609 ZNF665Q9H7R5 613 aa13.65□□□□□ -0.22
TUBB3-209ENST00000555609 HES4Q9HCC6 221 aa13.65□□□□□ -0.22
TUBB3-209ENST00000555609 TUBG2Q9NRH3 451 aa13.65□□□□□ -0.22
TUBB3-209ENST00000555609 LAMP3Q9UQV4 416 aa13.65□□□□□ -0.22
TUBB3-209ENST00000555609 MAP1LC3B2A6NCE7 125 aa13.64□□□□□ -0.23
TUBB3-209ENST00000555609 ZFP92A6NM28 416 aa13.64□□□□□ -0.23
TUBB3-209ENST00000555609 CYB5BO43169 146 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms