RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 IDI2-AS1Q9NZ38 188 aa8.39□□□□□ -1.07
SRP54-208ENST00000555557 RNF150Q9ULK6 438 aa8.39□□□□□ -1.07
SRP54-208ENST00000555557 RBM7Q9Y580 266 aaKnown RBP8.39□□□□□ -1.07
SRP54-208ENST00000555557 DSCAML1Q8TD84 2053 aa8.39□□□□□ -1.07
SRP54-208ENST00000555557 UNC79Q9P2D8 2635 aa8.39□□□□□ -1.07
SRP54-208ENST00000555557 NOTCH2Q04721 2471 aa8.39□□□□□ -1.07
SRP54-208ENST00000555557 LOC105371242A0A075B767 164 aa8.39□□□□□ -1.07
SRP54-208ENST00000555557 TRBV23-1A0A0A0MS06 115 aa8.39□□□□□ -1.07
SRP54-208ENST00000555557 A0A1W2PPE3 182 aa8.39□□□□□ -1.07
SRP54-208ENST00000555557 HMX3A6NHT5 357 aa8.39□□□□□ -1.07
SRP54-208ENST00000555557 HSD17B6O14756 317 aa8.39□□□□□ -1.07
SRP54-208ENST00000555557 GPR37O15354 613 aa8.39□□□□□ -1.07
SRP54-208ENST00000555557 DHFRP00374 187 aa8.39□□□□□ -1.07
SRP54-208ENST00000555557 GNRHRP30968 328 aa8.39□□□□□ -1.07
SRP54-208ENST00000555557 ZNF134P52741 427 aa8.39□□□□□ -1.07
SRP54-208ENST00000555557 DLX6P56179 175 aa8.39□□□□□ -1.07
SRP54-208ENST00000555557 MORN2Q502X0 79 aa8.39□□□□□ -1.07
SRP54-208ENST00000555557 SLC51BQ86UW2 128 aa8.39□□□□□ -1.07
SRP54-208ENST00000555557 C11orf42Q8N5U0 333 aa8.39□□□□□ -1.07
SRP54-208ENST00000555557 ZDHHC22Q8N966 263 aa8.39□□□□□ -1.07
SRP54-208ENST00000555557 OR52B4Q8NGK2 314 aa8.39□□□□□ -1.07
SRP54-208ENST00000555557 DACT3Q96B18 629 aaPredicted RBP8.39□□□□□ -1.07
SRP54-208ENST00000555557 GON7Q9BXV9 100 aa8.39□□□□□ -1.07
SRP54-208ENST00000555557 GAL3ST2Q9H3Q3 398 aa8.39□□□□□ -1.07
SRP54-208ENST00000555557 LPAR2Q9HBW0 351 aa8.39□□□□□ -1.07
SRP54-208ENST00000555557 LPAR3Q9UBY5 353 aa8.39□□□□□ -1.07
SRP54-208ENST00000555557 ALG5Q9Y673 324 aa8.39□□□□□ -1.07
SRP54-208ENST00000555557 YLPM1P49750 1951 aaKnown RBP8.38□□□□□ -1.07
SRP54-208ENST00000555557 ANKRD17O75179 2603 aaKnown RBP8.38□□□□□ -1.07
SRP54-208ENST00000555557 A0A0A6YYJ9 748 aa8.38□□□□□ -1.07
SRP54-208ENST00000555557 KIAA1324LA8MWY0 1029 aaPredicted RBP8.38□□□□□ -1.07
SRP54-208ENST00000555557 FAM157AC9JC47 383 aa8.38□□□□□ -1.07
SRP54-208ENST00000555557 SLC31A2O15432 143 aa8.38□□□□□ -1.07
SRP54-208ENST00000555557 ST8SIA5O15466 376 aa8.38□□□□□ -1.07
SRP54-208ENST00000555557 LUMP51884 338 aaPredicted RBP8.38□□□□□ -1.07
SRP54-208ENST00000555557 ARF6P62330 175 aa8.38□□□□□ -1.07
SRP54-208ENST00000555557 C4orf46Q504U0 113 aa8.38□□□□□ -1.07
SRP54-208ENST00000555557 PHLDA2Q53GA4 152 aa8.38□□□□□ -1.07
SRP54-208ENST00000555557 HEPN1Q6WQI6 88 aa8.38□□□□□ -1.07
SRP54-208ENST00000555557 ZNF818PQ6ZRF7 136 aa8.38□□□□□ -1.07
SRP54-208ENST00000555557 SLC38A6Q8IZM9 456 aa8.38□□□□□ -1.07
SRP54-208ENST00000555557 LY6G5BQ8NDX9 201 aa8.38□□□□□ -1.07
SRP54-208ENST00000555557 TMEM230Q96A57 120 aa8.38□□□□□ -1.07
SRP54-208ENST00000555557 SLC5A7Q9GZV3 580 aa8.38□□□□□ -1.07
SRP54-208ENST00000555557 LINC00574Q9H8X3 128 aa8.38□□□□□ -1.07
SRP54-208ENST00000555557 GFOD1Q9NXC2 390 aa8.38□□□□□ -1.07
SRP54-208ENST00000555557 ZNRD1Q9P1U0 126 aa8.38□□□□□ -1.07
SRP54-208ENST00000555557 JPT1Q9UK76 154 aa8.38□□□□□ -1.07
SRP54-208ENST00000555557 MAP1AP78559 2803 aaPredicted RBP8.38□□□□□ -1.07
SRP54-208ENST00000555557 SHOXO15266 292 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 TNFSF12O43508 249 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 IGLV2-14P01704 120 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 OR4E1P0C645 316 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 GNG10P50151 68 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 MECP2P51608 486 aaKnown RBP8.37□□□□□ -1.07
SRP54-208ENST00000555557 AP2S1P53680 142 aaPredicted RBP8.37□□□□□ -1.07
SRP54-208ENST00000555557 RAG2P55895 527 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 UCP3P55916 312 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 PIGPP57054 158 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 SLC25A42Q86VD7 318 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 C8orf46Q8TAG6 207 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 ABHD14BQ96IU4 210 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 ST6GAL2Q96JF0 529 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 SCGB3A2Q96PL1 93 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 MMP26Q9NRE1 261 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 ONECUT1Q9UBC0 465 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 PSG11Q9UQ72 335 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 YPEL1O60688 119 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 LIPFP07098 398 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 CTSDP07339 412 aaPredicted RBP8.37□□□□□ -1.07
SRP54-208ENST00000555557 IGHV1-8P0DP01 117 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 DSCR9P59020 149 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 UBE2MP61081 183 aaKnown RBP8.37□□□□□ -1.07
SRP54-208ENST00000555557 PPP1R1AQ13522 171 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 SURF2Q15527 256 aaPredicted RBP8.37□□□□□ -1.07
SRP54-208ENST00000555557 ABCA11PQ4W5N1 156 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 CT45A1Q5HYN5 189 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 Q5PR19 223 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 CD276Q5ZPR3 534 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 GLDNQ6ZMI3 551 aaPredicted RBP8.37□□□□□ -1.07
SRP54-208ENST00000555557 NOXA1Q86UR1 476 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 MAPK1IP1LQ8NDC0 245 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 CT45A3Q8NHU0 189 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 ZFAND1Q8TCF1 268 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 RAB39BQ96DA2 213 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 YPEL2Q96QA6 119 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 AGMATQ9BSE5 352 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 RSRP1Q9BUV0 290 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 SUCNR1Q9BXA5 334 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 TOLLIPQ9H0E2 274 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 OR2D2Q9H210 308 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 RAB9BQ9NP90 201 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 SLC2A9Q9NRM0 540 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 PRR13Q9NZ81 148 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 KCNS2Q9ULS6 477 aa8.37□□□□□ -1.07
SRP54-208ENST00000555557 C14orf166Q9Y224 244 aaKnown RBP8.37□□□□□ -1.07
SRP54-208ENST00000555557 TEX15Q9BXT5 2789 aa8.36□□□□□ -1.07
SRP54-208ENST00000555557 C17orf98A8MV24 154 aa8.36□□□□□ -1.07
SRP54-208ENST00000555557 VAMP1P23763 118 aa8.36□□□□□ -1.07
SRP54-208ENST00000555557 ECI1P42126 302 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms