RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 LINC01548A6NM66 108 aa19.29■□□□□ 0.68
PRKCH-216ENST00000555542 TMEM14DPA8MWL7 114 aa19.29■□□□□ 0.68
PRKCH-216ENST00000555542 RRP9O43818 475 aaKnown RBP19.29■□□□□ 0.68
PRKCH-216ENST00000555542 YPEL1O60688 119 aa19.29■□□□□ 0.68
PRKCH-216ENST00000555542 CPEP16870 476 aa19.29■□□□□ 0.68
PRKCH-216ENST00000555542 MAP2K4P45985 399 aa19.29■□□□□ 0.68
PRKCH-216ENST00000555542 LSAMPQ13449 338 aa19.29■□□□□ 0.68
PRKCH-216ENST00000555542 HMGN3Q15651 99 aa19.29■□□□□ 0.68
PRKCH-216ENST00000555542 TMEM91Q6ZNR0 172 aa19.29■□□□□ 0.68
PRKCH-216ENST00000555542 OR2W3Q7Z3T1 314 aa19.29■□□□□ 0.68
PRKCH-216ENST00000555542 KLHL30-AS1Q8NEE0 82 aa19.29■□□□□ 0.68
PRKCH-216ENST00000555542 RCC1LQ96I51 464 aaKnown RBP19.29■□□□□ 0.68
PRKCH-216ENST00000555542 YPEL2Q96QA6 119 aa19.29■□□□□ 0.68
PRKCH-216ENST00000555542 MGLLQ99685 303 aa19.29■□□□□ 0.68
PRKCH-216ENST00000555542 ZFP57Q9NU63 452 aa19.29■□□□□ 0.68
PRKCH-216ENST00000555542 PRKDCP78527 4128 aaKnown RBP19.29■□□□□ 0.68
PRKCH-216ENST00000555542 CALRP27797 417 aaKnown RBP19.28■□□□□ 0.68
PRKCH-216ENST00000555542 SOX6P35712 828 aa19.28■□□□□ 0.68
PRKCH-216ENST00000555542 RAB11BQ15907 218 aa19.28■□□□□ 0.68
PRKCH-216ENST00000555542 TEX38Q6PEX7 206 aa19.28■□□□□ 0.68
PRKCH-216ENST00000555542 SVOPQ8N4V2 548 aa19.28■□□□□ 0.68
PRKCH-216ENST00000555542 RBMXL1Q96E39 390 aaKnown RBP19.28■□□□□ 0.68
PRKCH-216ENST00000555542 PLSCR3Q9NRY6 295 aa19.28■□□□□ 0.68
PRKCH-216ENST00000555542 AURKAIP1Q9NWT8 199 aaPredicted RBP19.28■□□□□ 0.68
PRKCH-216ENST00000555542 BLOC1S6Q9UL45 172 aa19.28■□□□□ 0.68
PRKCH-216ENST00000555542 NOTCH3Q9UM47 2321 aa19.28■□□□□ 0.68
PRKCH-216ENST00000555542 SLC17A2O00624 439 aa19.27■□□□□ 0.68
PRKCH-216ENST00000555542 DUS4LO95620 317 aaKnown RBP19.27■□□□□ 0.68
PRKCH-216ENST00000555542 F2RL1P55085 397 aa19.27■□□□□ 0.68
PRKCH-216ENST00000555542 QRFPP83859 136 aa19.27■□□□□ 0.68
PRKCH-216ENST00000555542 MMDQ15546 238 aa19.27■□□□□ 0.68
PRKCH-216ENST00000555542 C8orf86Q6ZUL3 223 aa19.27■□□□□ 0.68
PRKCH-216ENST00000555542 MOB1BQ7L9L4 216 aa19.27■□□□□ 0.68
PRKCH-216ENST00000555542 MRPL20Q9BYC9 149 aaKnown RBP19.27■□□□□ 0.68
PRKCH-216ENST00000555542 TGP01266 2768 aa19.27■□□□□ 0.68
PRKCH-216ENST00000555542 SLC2A2P11168 524 aaPredicted RBP19.26■□□□□ 0.67
PRKCH-216ENST00000555542 VDAC1P21796 283 aa19.26■□□□□ 0.67
PRKCH-216ENST00000555542 PNLIPRP3Q17RR3 467 aa19.26■□□□□ 0.67
PRKCH-216ENST00000555542 Q6ZPA2 131 aa19.26■□□□□ 0.67
PRKCH-216ENST00000555542 LPAR5Q9H1C0 372 aa19.26■□□□□ 0.67
PRKCH-216ENST00000555542 RIMS4Q9H426 269 aaPredicted RBP19.26■□□□□ 0.67
PRKCH-216ENST00000555542 SAA2-SAA4A0A096LPE2 208 aa19.25■□□□□ 0.67
PRKCH-216ENST00000555542 A0A0A6YYD4 124 aa19.25■□□□□ 0.67
PRKCH-216ENST00000555542 SOCS1O15524 211 aa19.25■□□□□ 0.67
PRKCH-216ENST00000555542 SAA2P0DJI9 122 aaPredicted RBP19.25■□□□□ 0.67
PRKCH-216ENST00000555542 CD37P11049 281 aa19.25■□□□□ 0.67
PRKCH-216ENST00000555542 SLC6A1P30531 599 aa19.25■□□□□ 0.67
PRKCH-216ENST00000555542 RANBP1P43487 201 aa19.25■□□□□ 0.67
PRKCH-216ENST00000555542 FABP5Q01469 135 aa19.25■□□□□ 0.67
PRKCH-216ENST00000555542 CXorf66Q5JRM2 361 aaPredicted RBP19.25■□□□□ 0.67
PRKCH-216ENST00000555542 C18orf65Q6ZTR6 163 aa19.25■□□□□ 0.67
PRKCH-216ENST00000555542 ODF3L1Q8IXM7 274 aa19.25■□□□□ 0.67
PRKCH-216ENST00000555542 FAM71E2Q8N5Q1 922 aa19.25■□□□□ 0.67
PRKCH-216ENST00000555542 LINC00482Q8N8I6 264 aa19.25■□□□□ 0.67
PRKCH-216ENST00000555542 GFI1Q99684 422 aa19.25■□□□□ 0.67
PRKCH-216ENST00000555542 HSPB9Q9BQS6 159 aa19.25■□□□□ 0.67
PRKCH-216ENST00000555542 ZNF251Q9BRH9 671 aa19.25■□□□□ 0.67
PRKCH-216ENST00000555542 ACOT13Q9NPJ3 140 aa19.25■□□□□ 0.67
PRKCH-216ENST00000555542 ZNF107Q9UII5 783 aaPredicted RBP19.25■□□□□ 0.67
PRKCH-216ENST00000555542 AK3Q9UIJ7 227 aa19.25■□□□□ 0.67
PRKCH-216ENST00000555542 ST8SIA5O15466 376 aa19.24■□□□□ 0.67
PRKCH-216ENST00000555542 NAPSAO96009 420 aa19.24■□□□□ 0.67
PRKCH-216ENST00000555542 OR3A3P47888 321 aa19.24■□□□□ 0.67
PRKCH-216ENST00000555542 THBS3P49746 956 aa19.24■□□□□ 0.67
PRKCH-216ENST00000555542 CLDN12P56749 244 aa19.24■□□□□ 0.67
PRKCH-216ENST00000555542 LY6G6FQ5SQ64 297 aa19.24■□□□□ 0.67
PRKCH-216ENST00000555542 ZNF367Q7RTV3 350 aa19.24■□□□□ 0.67
PRKCH-216ENST00000555542 ZNF695Q8IW36 515 aa19.24■□□□□ 0.67
PRKCH-216ENST00000555542 MRPL41Q8IXM3 137 aaKnown RBP19.24■□□□□ 0.67
PRKCH-216ENST00000555542 DPF1Q92782 380 aa19.24■□□□□ 0.67
PRKCH-216ENST00000555542 NABP2Q9BQ15 211 aa19.24■□□□□ 0.67
PRKCH-216ENST00000555542 VEGFCP49767 419 aa19.23■□□□□ 0.67
PRKCH-216ENST00000555542 ACTBP60709 375 aa19.23■□□□□ 0.67
PRKCH-216ENST00000555542 TBCEQ15813 527 aaPredicted RBP19.23■□□□□ 0.67
PRKCH-216ENST00000555542 ETV3LQ6ZN32 361 aa19.23■□□□□ 0.67
PRKCH-216ENST00000555542 ZNF833PQ6ZTB9 187 aa19.23■□□□□ 0.67
PRKCH-216ENST00000555542 HDHD3Q9BSH5 251 aaPredicted RBP19.23■□□□□ 0.67
PRKCH-216ENST00000555542 GPR61Q9BZJ8 451 aa19.23■□□□□ 0.67
PRKCH-216ENST00000555542 PIPOXQ9P0Z9 390 aa19.23■□□□□ 0.67
PRKCH-216ENST00000555542 SLC23A1Q9UHI7 598 aa19.23■□□□□ 0.67
PRKCH-216ENST00000555542 V9GY05 133 aa19.23■□□□□ 0.67
PRKCH-216ENST00000555542 HSPA12AO43301 675 aa19.22■□□□□ 0.67
PRKCH-216ENST00000555542 RPLP1P05386 114 aaKnown RBP19.22■□□□□ 0.67
PRKCH-216ENST00000555542 MYCNOSP40205 109 aa19.22■□□□□ 0.67
PRKCH-216ENST00000555542 PSMD7P51665 324 aa19.22■□□□□ 0.67
PRKCH-216ENST00000555542 RAB25P57735 213 aa19.22■□□□□ 0.67
PRKCH-216ENST00000555542 HES5Q5TA89 166 aa19.22■□□□□ 0.67
PRKCH-216ENST00000555542 ZNF880Q6PDB4 577 aa19.22■□□□□ 0.67
PRKCH-216ENST00000555542 FAM3DQ96BQ1 224 aa19.22■□□□□ 0.67
PRKCH-216ENST00000555542 IFI27L2Q9H2X8 130 aa19.22■□□□□ 0.67
PRKCH-216ENST00000555542 C12orf4Q9NQ89 552 aa19.22■□□□□ 0.67
PRKCH-216ENST00000555542 KIAA1456Q9P272 454 aa19.22■□□□□ 0.67
PRKCH-216ENST00000555542 MGAT4AQ9UM21 535 aa19.22■□□□□ 0.67
PRKCH-216ENST00000555542 RAB29O14966 203 aa19.21■□□□□ 0.67
PRKCH-216ENST00000555542 HLA-DRB3P79483 266 aa19.21■□□□□ 0.67
PRKCH-216ENST00000555542 FOXE3Q13461 319 aa19.21■□□□□ 0.67
PRKCH-216ENST00000555542 LCNL1Q6ZST4 164 aa19.21■□□□□ 0.67
PRKCH-216ENST00000555542 FAM89BQ8N5H3 189 aa19.21■□□□□ 0.67
PRKCH-216ENST00000555542 OR56B1Q8NGI3 324 aa19.21■□□□□ 0.67
PRKCH-216ENST00000555542 ARHGAP5-AS1Q96IT6 56 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms