RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 CBLN4Q9NTU7 201 aa7.33□□□□□ -1.24
LINC00641-201ENST00000555379 RCL1Q9Y2P8 373 aaKnown RBP7.33□□□□□ -1.24
LINC00641-201ENST00000555379 TRIP11Q15643 1979 aa7.33□□□□□ -1.24
LINC00641-201ENST00000555379 IGLV3-32A0A0A0MS00 114 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 C7orf77A4D0Y5 90 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 DLEU1O43261 78 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 PRDX2P32119 198 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 IFITM2Q01629 132 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 C8orf82Q6P1X6 216 aaPredicted RBP7.32□□□□□ -1.24
LINC00641-201ENST00000555379 FAM131CQ96AQ9 280 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 C2orf88Q9BSF0 95 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 MRM2Q9UI43 246 aaKnown RBP7.32□□□□□ -1.24
LINC00641-201ENST00000555379 TUBGCP6Q96RT7 1819 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 DSPPQ9NZW4 1301 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 BRCA1P38398 1863 aaKnown RBP7.32□□□□□ -1.24
LINC00641-201ENST00000555379 A0A1W2PQM1 296 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 FBLL1A6NHQ2 334 aaKnown RBP7.32□□□□□ -1.24
LINC00641-201ENST00000555379 SEMG1P04279 462 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 PPP1CCP36873 323 aaKnown RBP7.32□□□□□ -1.24
LINC00641-201ENST00000555379 C20orf141Q9NUB4 165 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 CLEC5AQ9NY25 188 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 HSPB7Q9UBY9 170 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 FBXL17Q9UF56 701 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 KCNK7Q9Y2U2 307 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 DIRC3C9JPN6 131 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 INHBBP09529 407 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 PGA4P0DJD7 388 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 COX7A1P24310 79 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 LTBRP36941 435 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 TNXAQ16473 311 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 ANKRD55Q3KP44 614 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 FAM106AQ4KMX7 169 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 KHDC3LQ587J8 217 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 PRSS54Q6PEW0 395 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 TMEM183AQ8IXX5 376 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 OR9G1Q8NH87 305 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 OR4C45A6NMZ5 311 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 ISLRO14498 428 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 TSPOP30536 169 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 RBM11P57052 281 aaKnown RBP7.32□□□□□ -1.24
LINC00641-201ENST00000555379 CTF1Q16619 201 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 CXorf67Q86X51 503 aaPredicted RBP7.32□□□□□ -1.24
LINC00641-201ENST00000555379 ARHGAP5-AS1Q96IT6 56 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 MARVELD1Q9BSK0 173 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 TMEM208Q9BTX3 173 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 TNFRSF12AQ9NP84 129 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 COA4Q9NYJ1 87 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 ZNF835Q9Y2P0 537 aa7.32□□□□□ -1.24
LINC00641-201ENST00000555379 NKX2-8O15522 239 aa7.31□□□□□ -1.24
LINC00641-201ENST00000555379 ADAP1O75689 374 aa7.31□□□□□ -1.24
LINC00641-201ENST00000555379 CLDN14O95500 239 aa7.31□□□□□ -1.24
LINC00641-201ENST00000555379 ATP5J2P56134 94 aa7.31□□□□□ -1.24
LINC00641-201ENST00000555379 PAX5Q02548 391 aa7.31□□□□□ -1.24
LINC00641-201ENST00000555379 C10orf126Q8N4M7 172 aa7.31□□□□□ -1.24
LINC00641-201ENST00000555379 KCNK17Q96T54 332 aa7.31□□□□□ -1.24
LINC00641-201ENST00000555379 CHODLQ9H9P2 273 aa7.31□□□□□ -1.24
LINC00641-201ENST00000555379 G6PC2Q9NQR9 355 aa7.31□□□□□ -1.24
LINC00641-201ENST00000555379 ARID2Q68CP9 1835 aa7.31□□□□□ -1.24
LINC00641-201ENST00000555379 S1PR2O95136 353 aa7.31□□□□□ -1.24
LINC00641-201ENST00000555379 IGKV3-11P04433 115 aa7.31□□□□□ -1.24
LINC00641-201ENST00000555379 HLA-GP17693 338 aa7.31□□□□□ -1.24
LINC00641-201ENST00000555379 FAM3BP58499 235 aaPredicted RBP7.31□□□□□ -1.24
LINC00641-201ENST00000555379 ERVS71-1P61550 626 aa7.31□□□□□ -1.24
LINC00641-201ENST00000555379 ARF6P62330 175 aa7.31□□□□□ -1.24
LINC00641-201ENST00000555379 ZFP36L1Q07352 338 aaKnown RBP7.31□□□□□ -1.24
LINC00641-201ENST00000555379 ANKRD34AQ69YU3 496 aa7.31□□□□□ -1.24
LINC00641-201ENST00000555379 C6orf201Q7Z4U5 140 aa7.31□□□□□ -1.24
LINC00641-201ENST00000555379 BCDIN3DQ7Z5W3 292 aaKnown RBP7.31□□□□□ -1.24
LINC00641-201ENST00000555379 OR1P1Q8NH06 330 aa7.31□□□□□ -1.24
LINC00641-201ENST00000555379 ANKRD20A5PA0PJZ0 165 aa7.31□□□□□ -1.24
LINC00641-201ENST00000555379 CRISP2P16562 243 aa7.31□□□□□ -1.24
LINC00641-201ENST00000555379 BTF3P20290 206 aaKnown RBP7.31□□□□□ -1.24
LINC00641-201ENST00000555379 ZNF816Q0VGE8 651 aaPredicted RBP7.31□□□□□ -1.24
LINC00641-201ENST00000555379 TMEM241Q24JQ0 296 aa7.31□□□□□ -1.24
LINC00641-201ENST00000555379 TSPO2Q5TGU0 170 aa7.31□□□□□ -1.24
LINC00641-201ENST00000555379 LHFPL4Q7Z7J7 247 aa7.31□□□□□ -1.24
LINC00641-201ENST00000555379 TMEM123Q8N131 208 aa7.31□□□□□ -1.24
LINC00641-201ENST00000555379 MAP1LC3CQ9BXW4 147 aa7.31□□□□□ -1.24
LINC00641-201ENST00000555379 ZNF703Q9H7S9 590 aaPredicted RBP7.31□□□□□ -1.24
LINC00641-201ENST00000555379 IDI2-AS1Q9NZ38 188 aa7.31□□□□□ -1.24
LINC00641-201ENST00000555379 CDC42EP3Q9UKI2 254 aa7.31□□□□□ -1.24
LINC00641-201ENST00000555379 TRPM6Q9BX84 2022 aa7.31□□□□□ -1.24
LINC00641-201ENST00000555379 IGKV3D-11A0A0A0MRZ8 115 aa7.31□□□□□ -1.24
LINC00641-201ENST00000555379 NTN3O00634 580 aaPredicted RBP7.31□□□□□ -1.24
LINC00641-201ENST00000555379 ITGB1BP1O14713 200 aa7.31□□□□□ -1.24
LINC00641-201ENST00000555379 SLC25A4P12235 298 aa7.31□□□□□ -1.24
LINC00641-201ENST00000555379 RNASEKQ6P5S7 137 aaKnown RBP7.31□□□□□ -1.24
LINC00641-201ENST00000555379 MISP3Q96FF7 219 aa7.31□□□□□ -1.24
LINC00641-201ENST00000555379 ABHD14AQ9BUJ0 271 aa7.31□□□□□ -1.24
LINC00641-201ENST00000555379 SLIRPQ9GZT3 109 aaKnown RBP7.31□□□□□ -1.24
LINC00641-201ENST00000555379 C19orf67A6NJJ6 358 aa7.3□□□□□ -1.24
LINC00641-201ENST00000555379 J3KRW8 73 aa7.3□□□□□ -1.24
LINC00641-201ENST00000555379 HYAL3O43820 417 aaPredicted RBP7.3□□□□□ -1.24
LINC00641-201ENST00000555379 HTR1DP28221 377 aa7.3□□□□□ -1.24
LINC00641-201ENST00000555379 ELLP55199 621 aaPredicted RBP7.3□□□□□ -1.24
LINC00641-201ENST00000555379 ZNF260Q3ZCT1 412 aa7.3□□□□□ -1.24
LINC00641-201ENST00000555379 VAX1Q5SQQ9 334 aa7.3□□□□□ -1.24
LINC00641-201ENST00000555379 HOGA1Q86XE5 327 aa7.3□□□□□ -1.24
LINC00641-201ENST00000555379 HARBI1Q96MB7 349 aa7.3□□□□□ -1.24
LINC00641-201ENST00000555379 NAT8Q9UHE5 227 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms