RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 IFNA2P01563 188 aa8.92□□□□□ -0.98
SHMT2-218ENST00000555213 IGHV1-69P01742 117 aa8.92□□□□□ -0.98
SHMT2-218ENST00000555213 H2AFB2P0C5Z0 115 aa8.92□□□□□ -0.98
SHMT2-218ENST00000555213 IGHV1-8P0DP01 117 aa8.92□□□□□ -0.98
SHMT2-218ENST00000555213 IGHV4-38-2P0DP08 117 aa8.92□□□□□ -0.98
SHMT2-218ENST00000555213 VSIG10L2P0DP72 767 aa8.92□□□□□ -0.98
SHMT2-218ENST00000555213 COX7A1P24310 79 aa8.92□□□□□ -0.98
SHMT2-218ENST00000555213 BCAP31P51572 246 aa8.92□□□□□ -0.98
SHMT2-218ENST00000555213 RAG2P55895 527 aa8.92□□□□□ -0.98
SHMT2-218ENST00000555213 DLX6P56179 175 aa8.92□□□□□ -0.98
SHMT2-218ENST00000555213 CDK10Q15131 360 aa8.92□□□□□ -0.98
SHMT2-218ENST00000555213 TMEM30BQ3MIR4 351 aa8.92□□□□□ -0.98
SHMT2-218ENST00000555213 IGSF11Q5DX21 431 aa8.92□□□□□ -0.98
SHMT2-218ENST00000555213 RNASE10Q5GAN6 216 aaKnown RBP8.92□□□□□ -0.98
SHMT2-218ENST00000555213 PRAMEF5Q5TYX0 476 aa8.92□□□□□ -0.98
SHMT2-218ENST00000555213 PLET1Q6UQ28 207 aa8.92□□□□□ -0.98
SHMT2-218ENST00000555213 HEPN1Q6WQI6 88 aa8.92□□□□□ -0.98
SHMT2-218ENST00000555213 RBMS3Q6XE24 437 aaKnown RBP8.92□□□□□ -0.98
SHMT2-218ENST00000555213 IDO2Q6ZQW0 420 aa8.92□□□□□ -0.98
SHMT2-218ENST00000555213 ZNF554Q86TJ5 538 aa8.92□□□□□ -0.98
SHMT2-218ENST00000555213 Q8N7P7 452 aa8.92□□□□□ -0.98
SHMT2-218ENST00000555213 OR13A1Q8NGR1 328 aa8.92□□□□□ -0.98
SHMT2-218ENST00000555213 TERB2Q8NHR7 220 aa8.92□□□□□ -0.98
SHMT2-218ENST00000555213 CHAC2Q8WUX2 184 aa8.92□□□□□ -0.98
SHMT2-218ENST00000555213 CCDC107Q8WV48 283 aa8.92□□□□□ -0.98
SHMT2-218ENST00000555213 NUDT15Q9NV35 164 aa8.92□□□□□ -0.98
SHMT2-218ENST00000555213 COPZ2Q9P299 210 aa8.92□□□□□ -0.98
SHMT2-218ENST00000555213 MGAT4AQ9UM21 535 aa8.92□□□□□ -0.98
SHMT2-218ENST00000555213 DNHD1Q96M86 4753 aa8.92□□□□□ -0.98
SHMT2-218ENST00000555213 ZNF469Q96JG9 3925 aaPredicted RBP8.91□□□□□ -0.98
SHMT2-218ENST00000555213 CENPVL3A0A0U1RRI6 287 aa8.91□□□□□ -0.98
SHMT2-218ENST00000555213 DISC1C4P0D8 188 aa8.91□□□□□ -0.98
SHMT2-218ENST00000555213 SSTR5P35346 364 aa8.91□□□□□ -0.98
SHMT2-218ENST00000555213 FAUP35544 74 aaKnown RBP8.91□□□□□ -0.98
SHMT2-218ENST00000555213 UBE2E1P51965 193 aa8.91□□□□□ -0.98
SHMT2-218ENST00000555213 RAB25P57735 213 aa8.91□□□□□ -0.98
SHMT2-218ENST00000555213 TAS2R46P59540 309 aa8.91□□□□□ -0.98
SHMT2-218ENST00000555213 HMGN3Q15651 99 aa8.91□□□□□ -0.98
SHMT2-218ENST00000555213 ACTBL2Q562R1 376 aa8.91□□□□□ -0.98
SHMT2-218ENST00000555213 KLF17Q5JT82 389 aaPredicted RBP8.91□□□□□ -0.98
SHMT2-218ENST00000555213 LDLRAD3Q86YD5 345 aa8.91□□□□□ -0.98
SHMT2-218ENST00000555213 PDZD9Q8IXQ8 264 aa8.91□□□□□ -0.98
SHMT2-218ENST00000555213 ARRDC1Q8N5I2 433 aa8.91□□□□□ -0.98
SHMT2-218ENST00000555213 OR10A7Q8NGE5 316 aa8.91□□□□□ -0.98
SHMT2-218ENST00000555213 OR5H2Q8NGV7 314 aa8.91□□□□□ -0.98
SHMT2-218ENST00000555213 GIMAP1Q8WWP7 306 aa8.91□□□□□ -0.98
SHMT2-218ENST00000555213 RTBDNQ9BSG5 229 aaPredicted RBP8.91□□□□□ -0.98
SHMT2-218ENST00000555213 SUCNR1Q9BXA5 334 aa8.91□□□□□ -0.98
SHMT2-218ENST00000555213 CLEC7AQ9BXN2 247 aa8.91□□□□□ -0.98
SHMT2-218ENST00000555213 C20orf85Q9H1P6 137 aa8.91□□□□□ -0.98
SHMT2-218ENST00000555213 TMEM133Q9H2Q1 129 aa8.91□□□□□ -0.98
SHMT2-218ENST00000555213 GHITMQ9H3K2 345 aa8.91□□□□□ -0.98
SHMT2-218ENST00000555213 ZNF286AQ9HBT8 521 aa8.91□□□□□ -0.98
SHMT2-218ENST00000555213 GPR132Q9UNW8 380 aa8.91□□□□□ -0.98
SHMT2-218ENST00000555213 VSIG4Q9Y279 399 aa8.91□□□□□ -0.98
SHMT2-218ENST00000555213 FAM96BQ9Y3D0 163 aa8.91□□□□□ -0.98
SHMT2-218ENST00000555213 ARHGAP32A7KAX9 2087 aa8.91□□□□□ -0.98
SHMT2-218ENST00000555213 TRBV6-7A0A0A0MS04 114 aa8.9□□□□□ -0.98
SHMT2-218ENST00000555213 A0A0A6YYJ9 748 aa8.9□□□□□ -0.98
SHMT2-218ENST00000555213 C7orf66A4D0T2 115 aa8.9□□□□□ -0.98
SHMT2-218ENST00000555213 RNASEK-C17orf49H0YIS7 233 aa8.9□□□□□ -0.98
SHMT2-218ENST00000555213 C15orf65H3BRN8 121 aa8.9□□□□□ -0.98
SHMT2-218ENST00000555213 NPFFO15130 113 aa8.9□□□□□ -0.98
SHMT2-218ENST00000555213 ARPC1BO15143 372 aaKnown RBP8.9□□□□□ -0.98
SHMT2-218ENST00000555213 FABP7O15540 132 aa8.9□□□□□ -0.98
SHMT2-218ENST00000555213 TUSC2O75896 110 aa8.9□□□□□ -0.98
SHMT2-218ENST00000555213 OR5H8P0DN80 308 aa8.9□□□□□ -0.98
SHMT2-218ENST00000555213 ANXA7P20073 488 aaKnown RBP8.9□□□□□ -0.98
SHMT2-218ENST00000555213 NFYBP25208 207 aa8.9□□□□□ -0.98
SHMT2-218ENST00000555213 OR3A3P47888 321 aa8.9□□□□□ -0.98
SHMT2-218ENST00000555213 LGALS4P56470 323 aa8.9□□□□□ -0.98
SHMT2-218ENST00000555213 KLRD1Q13241 179 aa8.9□□□□□ -0.98
SHMT2-218ENST00000555213 RBMS2Q15434 407 aaKnown RBP8.9□□□□□ -0.98
SHMT2-218ENST00000555213 TATDN3Q17R31 274 aa8.9□□□□□ -0.98
SHMT2-218ENST00000555213 MIDNQ504T8 468 aa8.9□□□□□ -0.98
SHMT2-218ENST00000555213 FAM53AQ6NSI3 398 aaPredicted RBP8.9□□□□□ -0.98
SHMT2-218ENST00000555213 BRD3OSQ6XYD6 125 aa8.9□□□□□ -0.98
SHMT2-218ENST00000555213 C9orf139Q6ZV77 190 aa8.9□□□□□ -0.98
SHMT2-218ENST00000555213 PNKDQ8N490 385 aa8.9□□□□□ -0.98
SHMT2-218ENST00000555213 PRR18Q8N4B5 295 aa8.9□□□□□ -0.98
SHMT2-218ENST00000555213 C11orf42Q8N5U0 333 aa8.9□□□□□ -0.98
SHMT2-218ENST00000555213 ZNF418Q8TF45 676 aaPredicted RBP8.9□□□□□ -0.98
SHMT2-218ENST00000555213 TNFRSF14Q92956 283 aa8.9□□□□□ -0.98
SHMT2-218ENST00000555213 ARL11Q969Q4 196 aa8.9□□□□□ -0.98
SHMT2-218ENST00000555213 KIRREL1Q96J84 757 aa8.9□□□□□ -0.98
SHMT2-218ENST00000555213 PRRT1Q99946 306 aa8.9□□□□□ -0.98
SHMT2-218ENST00000555213 SLC25A21Q9BQT8 299 aaPredicted RBP8.9□□□□□ -0.98
SHMT2-218ENST00000555213 NEURL2Q9BR09 285 aa8.9□□□□□ -0.98
SHMT2-218ENST00000555213 GINS4Q9BRT9 223 aa8.9□□□□□ -0.98
SHMT2-218ENST00000555213 ALX4Q9H161 411 aaPredicted RBP8.9□□□□□ -0.98
SHMT2-218ENST00000555213 LINC00574Q9H8X3 128 aa8.9□□□□□ -0.98
SHMT2-218ENST00000555213 BEX1Q9HBH7 125 aa8.9□□□□□ -0.98
SHMT2-218ENST00000555213 IDI2-AS1Q9NZ38 188 aa8.9□□□□□ -0.98
SHMT2-218ENST00000555213 EHFQ9NZC4 300 aa8.9□□□□□ -0.98
SHMT2-218ENST00000555213 GNG12Q9UBI6 72 aa8.9□□□□□ -0.98
SHMT2-218ENST00000555213 ZNF69Q9UC07 566 aa8.9□□□□□ -0.98
SHMT2-218ENST00000555213 ALG5Q9Y673 324 aa8.9□□□□□ -0.98
SHMT2-218ENST00000555213 KIAA2026Q5HYC2 2103 aa8.9□□□□□ -0.99
SHMT2-218ENST00000555213 IGHV2-26A0A0B4J1V2 119 aa8.89□□□□□ -0.99
SHMT2-218ENST00000555213 C12orf77C9JDV5 145 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms