RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 TAF9Q16594 264 aa9.43□□□□□ -0.9
SRP54-205ENST00000554803 HIKESHIQ53FT3 197 aa9.43□□□□□ -0.9
SRP54-205ENST00000554803 AWAT1Q58HT5 328 aa9.43□□□□□ -0.9
SRP54-205ENST00000554803 SOHLH1Q5JUK2 328 aa9.43□□□□□ -0.9
SRP54-205ENST00000554803 SLC22A25Q6T423 547 aa9.43□□□□□ -0.9
SRP54-205ENST00000554803 AAED1Q7RTV5 226 aa9.43□□□□□ -0.9
SRP54-205ENST00000554803 RNF144BQ7Z419 303 aa9.43□□□□□ -0.9
SRP54-205ENST00000554803 MKXQ8IYA7 352 aa9.43□□□□□ -0.9
SRP54-205ENST00000554803 ZNF565Q8N9K5 539 aa9.43□□□□□ -0.9
SRP54-205ENST00000554803 OR13D1Q8NGV5 346 aa9.43□□□□□ -0.9
SRP54-205ENST00000554803 LILRB1Q8NHL6 650 aaPredicted RBP9.43□□□□□ -0.9
SRP54-205ENST00000554803 NPRL2Q8WTW4 380 aa9.43□□□□□ -0.9
SRP54-205ENST00000554803 TOMM40LQ969M1 308 aa9.43□□□□□ -0.9
SRP54-205ENST00000554803 AKR1E2Q96JD6 320 aa9.43□□□□□ -0.9
SRP54-205ENST00000554803 ZNF385AQ96PM9 386 aaKnown RBP9.43□□□□□ -0.9
SRP54-205ENST00000554803 FAAP24Q9BTP7 215 aa9.43□□□□□ -0.9
SRP54-205ENST00000554803 SCRT1Q9BWW7 348 aa9.43□□□□□ -0.9
SRP54-205ENST00000554803 C11orf1Q9H5F2 150 aa9.43□□□□□ -0.9
SRP54-205ENST00000554803 TMEM231Q9H6L2 316 aa9.43□□□□□ -0.9
SRP54-205ENST00000554803 ESRP2Q9H6T0 727 aaKnown RBP9.43□□□□□ -0.9
SRP54-205ENST00000554803 SEBOXQ9HB31 216 aaPredicted RBP9.43□□□□□ -0.9
SRP54-205ENST00000554803 MMP24Q9Y5R2 645 aa9.43□□□□□ -0.9
SRP54-205ENST00000554803 FREM1Q5H8C1 2179 aa9.43□□□□□ -0.9
SRP54-205ENST00000554803 NOTCH1P46531 2555 aa9.42□□□□□ -0.9
SRP54-205ENST00000554803 IGKV3D-15A0A087WSY6 115 aa9.42□□□□□ -0.9
SRP54-205ENST00000554803 IGKV1D-8A0A087WSZ0 117 aa9.42□□□□□ -0.9
SRP54-205ENST00000554803 ZNF716A6NP11 495 aa9.42□□□□□ -0.9
SRP54-205ENST00000554803 H0Y980 276 aa9.42□□□□□ -0.9
SRP54-205ENST00000554803 M0R036 132 aa9.42□□□□□ -0.9
SRP54-205ENST00000554803 CD5LO43866 347 aa9.42□□□□□ -0.9
SRP54-205ENST00000554803 SCGB1D2O95969 90 aa9.42□□□□□ -0.9
SRP54-205ENST00000554803 ZNF44P15621 663 aa9.42□□□□□ -0.9
SRP54-205ENST00000554803 PAX1P15863 534 aa9.42□□□□□ -0.9
SRP54-205ENST00000554803 ACKR3P25106 362 aa9.42□□□□□ -0.9
SRP54-205ENST00000554803 UCP1P25874 307 aa9.42□□□□□ -0.9
SRP54-205ENST00000554803 EWSR1Q01844 656 aaKnown RBP eCLIP9.42□□□□□ -0.9
SRP54-205ENST00000554803 PNRC1Q12796 327 aaPredicted RBP9.42□□□□□ -0.9
SRP54-205ENST00000554803 PMS2P11Q13670 270 aa9.42□□□□□ -0.9
SRP54-205ENST00000554803 SNAI3Q3KNW1 292 aa9.42□□□□□ -0.9
SRP54-205ENST00000554803 PHYHD1Q5SRE7 291 aa9.42□□□□□ -0.9
SRP54-205ENST00000554803 C20orf204Q6ZNR8 217 aa9.42□□□□□ -0.9
SRP54-205ENST00000554803 COLCA1Q6ZS62 124 aa9.42□□□□□ -0.9
SRP54-205ENST00000554803 MOB1BQ7L9L4 216 aa9.42□□□□□ -0.9
SRP54-205ENST00000554803 LYZL2Q7Z4W2 148 aa9.42□□□□□ -0.9
SRP54-205ENST00000554803 RTN4RL2Q86UN3 420 aa9.42□□□□□ -0.9
SRP54-205ENST00000554803 ZNF695Q8IW36 515 aa9.42□□□□□ -0.9
SRP54-205ENST00000554803 FOXRED2Q8IWF2 684 aa9.42□□□□□ -0.9
SRP54-205ENST00000554803 FBXL14Q8N1E6 418 aa9.42□□□□□ -0.9
SRP54-205ENST00000554803 SUMF2Q8NBJ7 301 aa9.42□□□□□ -0.9
SRP54-205ENST00000554803 BHLHE23Q8NDY6 225 aa9.42□□□□□ -0.9
SRP54-205ENST00000554803 OR5D13Q8NGL4 314 aa9.42□□□□□ -0.9
SRP54-205ENST00000554803 SECTM1Q8WVN6 248 aa9.42□□□□□ -0.9
SRP54-205ENST00000554803 HPSE2Q8WWQ2 592 aa9.42□□□□□ -0.9
SRP54-205ENST00000554803 ERGIC1Q969X5 290 aa9.42□□□□□ -0.9
SRP54-205ENST00000554803 FOXB1Q99853 325 aa9.42□□□□□ -0.9
SRP54-205ENST00000554803 OR2H1Q9GZK4 316 aa9.42□□□□□ -0.9
SRP54-205ENST00000554803 TMPRSS5Q9H3S3 457 aa9.42□□□□□ -0.9
SRP54-205ENST00000554803 ZNF442Q9H7R0 627 aa9.42□□□□□ -0.9
SRP54-205ENST00000554803 UBTD1Q9HAC8 227 aa9.42□□□□□ -0.9
SRP54-205ENST00000554803 UBE2J1Q9Y385 318 aaPredicted RBP9.42□□□□□ -0.9
SRP54-205ENST00000554803 A0A1B0GU03 582 aa9.41□□□□□ -0.9
SRP54-205ENST00000554803 MBD3L3A6NE82 208 aaPredicted RBP9.41□□□□□ -0.9
SRP54-205ENST00000554803 NPIPB11E5RHQ5 1161 aa9.41□□□□□ -0.9
SRP54-205ENST00000554803 J3QW42 95 aa9.41□□□□□ -0.9
SRP54-205ENST00000554803 AP4M1O00189 453 aa9.41□□□□□ -0.9
SRP54-205ENST00000554803 SIGLEC5O15389 551 aa9.41□□□□□ -0.9
SRP54-205ENST00000554803 SPRY1O43609 319 aaPredicted RBP9.41□□□□□ -0.9
SRP54-205ENST00000554803 CYTIPO60759 359 aa9.41□□□□□ -0.9
SRP54-205ENST00000554803 TUSC2O75896 110 aa9.41□□□□□ -0.9
SRP54-205ENST00000554803 NAPSAO96009 420 aa9.41□□□□□ -0.9
SRP54-205ENST00000554803 IGHV2-5P01817 119 aa9.41□□□□□ -0.9
SRP54-205ENST00000554803 OR8U8P0C7N1 319 aa9.41□□□□□ -0.9
SRP54-205ENST00000554803 ZNF32P17041 273 aa9.41□□□□□ -0.9
SRP54-205ENST00000554803 CD200P41217 278 aa9.41□□□□□ -0.9
SRP54-205ENST00000554803 SULT1A1P50225 295 aa9.41□□□□□ -0.9
SRP54-205ENST00000554803 FGF12P61328 243 aa9.41□□□□□ -0.9
SRP54-205ENST00000554803 HGFACQ04756 655 aa9.41□□□□□ -0.9
SRP54-205ENST00000554803 RNPS1Q15287 305 aaKnown RBP9.41□□□□□ -0.9
SRP54-205ENST00000554803 KHDC3LQ587J8 217 aa9.41□□□□□ -0.9
SRP54-205ENST00000554803 PLCXD3Q63HM9 321 aa9.41□□□□□ -0.9
SRP54-205ENST00000554803 SLC35E3Q7Z769 313 aa9.41□□□□□ -0.9
SRP54-205ENST00000554803 STX12Q86Y82 276 aa9.41□□□□□ -0.9
SRP54-205ENST00000554803 MAPK1IP1LQ8NDC0 245 aa9.41□□□□□ -0.9
SRP54-205ENST00000554803 MBD3L2Q8NHZ7 208 aaPredicted RBP9.41□□□□□ -0.9
SRP54-205ENST00000554803 ABHD3Q8WU67 409 aa9.41□□□□□ -0.9
SRP54-205ENST00000554803 IGFBPL1Q8WX77 278 aa9.41□□□□□ -0.9
SRP54-205ENST00000554803 MAFIPQ8WZ33 124 aa9.41□□□□□ -0.9
SRP54-205ENST00000554803 RAB40CQ96S21 281 aa9.41□□□□□ -0.9
SRP54-205ENST00000554803 CLCC1Q96S66 551 aa9.41□□□□□ -0.9
SRP54-205ENST00000554803 USB1Q9BQ65 265 aaKnown RBP9.41□□□□□ -0.9
SRP54-205ENST00000554803 ADAT1Q9BUB4 502 aaKnown RBP9.41□□□□□ -0.9
SRP54-205ENST00000554803 PARD6GQ9BYG4 376 aaPredicted RBP9.41□□□□□ -0.9
SRP54-205ENST00000554803 YAE1D1Q9NRH1 226 aa9.41□□□□□ -0.9
SRP54-205ENST00000554803 TMEM242Q9NWH2 141 aa9.41□□□□□ -0.9
SRP54-205ENST00000554803 RCL1Q9Y2P8 373 aaKnown RBP9.41□□□□□ -0.9
SRP54-205ENST00000554803 RBFOX3A6NFN3 312 aa9.4□□□□□ -0.9
SRP54-205ENST00000554803 GEMIN2O14893 280 aaKnown RBP9.4□□□□□ -0.9
SRP54-205ENST00000554803 SIAH2O43255 324 aa9.4□□□□□ -0.9
SRP54-205ENST00000554803 SYNGR4O95473 234 aa9.4□□□□□ -0.9
SRP54-205ENST00000554803 AADACP22760 399 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms