RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 LINC00313P59037 77 aa1.47□□□□□ -2.17
SCFD1-213ENST00000554776 FAM229BQ4G0N7 80 aa1.47□□□□□ -2.17
SCFD1-213ENST00000554776 PYCR3Q53H96 274 aa1.47□□□□□ -2.17
SCFD1-213ENST00000554776 HCP5Q6MZN7 132 aa1.47□□□□□ -2.17
SCFD1-213ENST00000554776 DRAM2Q6UX65 266 aa1.47□□□□□ -2.17
SCFD1-213ENST00000554776 Q6ZRU5 148 aa1.47□□□□□ -2.17
SCFD1-213ENST00000554776 NIT1Q86X76 327 aa1.47□□□□□ -2.17
SCFD1-213ENST00000554776 PLCZ1Q86YW0 608 aa1.47□□□□□ -2.17
SCFD1-213ENST00000554776 OR5K1Q8NHB7 308 aa1.47□□□□□ -2.17
SCFD1-213ENST00000554776 SLC37A2Q8TED4 501 aa1.47□□□□□ -2.17
SCFD1-213ENST00000554776 DRC3Q9H069 523 aa1.47□□□□□ -2.17
SCFD1-213ENST00000554776 MS4A6AQ9H2W1 248 aa1.47□□□□□ -2.17
SCFD1-213ENST00000554776 PLEKHJ1Q9NW61 149 aa1.47□□□□□ -2.17
SCFD1-213ENST00000554776 FAM206AQ9NX38 181 aa1.47□□□□□ -2.17
SCFD1-213ENST00000554776 TAS2R9Q9NYW1 312 aa1.47□□□□□ -2.17
SCFD1-213ENST00000554776 LINC00527Q9UJ94 153 aa1.47□□□□□ -2.17
SCFD1-213ENST00000554776 PSMD13Q9UNM6 376 aa1.47□□□□□ -2.17
SCFD1-213ENST00000554776 ZNF407Q9C0G0 2248 aa1.47□□□□□ -2.17
SCFD1-213ENST00000554776 CEP170Q5SW79 1584 aa1.47□□□□□ -2.17
SCFD1-213ENST00000554776 ATAD5Q96QE3 1844 aa1.46□□□□□ -2.18
SCFD1-213ENST00000554776 LOC102725191A0A1B0GVB3 256 aa1.46□□□□□ -2.18
SCFD1-213ENST00000554776 F5H768 121 aa1.46□□□□□ -2.18
SCFD1-213ENST00000554776 MRASO14807 208 aa1.46□□□□□ -2.18
SCFD1-213ENST00000554776 BIRC5O15392 142 aa1.46□□□□□ -2.18
SCFD1-213ENST00000554776 SLC31A1O15431 190 aa1.46□□□□□ -2.18
SCFD1-213ENST00000554776 HPGDSO60760 199 aa1.46□□□□□ -2.18
SCFD1-213ENST00000554776 DEDDO75618 318 aa1.46□□□□□ -2.18
SCFD1-213ENST00000554776 CDS2O95674 445 aa1.46□□□□□ -2.18
SCFD1-213ENST00000554776 SOD1P00441 154 aa1.46□□□□□ -2.18
SCFD1-213ENST00000554776 HBZP02008 142 aa1.46□□□□□ -2.18
SCFD1-213ENST00000554776 OR4A8P0C604 315 aa1.46□□□□□ -2.18
SCFD1-213ENST00000554776 CD99P14209 185 aa1.46□□□□□ -2.18
SCFD1-213ENST00000554776 CFL1P23528 166 aaKnown RBP1.46□□□□□ -2.18
SCFD1-213ENST00000554776 RPL14P50914 215 aaKnown RBP1.46□□□□□ -2.18
SCFD1-213ENST00000554776 BLVRAP53004 296 aa1.46□□□□□ -2.18
SCFD1-213ENST00000554776 MAP3K7CLP57077 242 aa1.46□□□□□ -2.18
SCFD1-213ENST00000554776 HPCAP84074 193 aa1.46□□□□□ -2.18
SCFD1-213ENST00000554776 PSG4Q00888 419 aa1.46□□□□□ -2.18
SCFD1-213ENST00000554776 SCGB1D4Q6XE38 83 aa1.46□□□□□ -2.18
SCFD1-213ENST00000554776 TMEM251Q8N6I4 163 aa1.46□□□□□ -2.18
SCFD1-213ENST00000554776 ZFAND2AQ8N6M9 145 aa1.46□□□□□ -2.18
SCFD1-213ENST00000554776 OR52E4Q8NGH9 312 aa1.46□□□□□ -2.18
SCFD1-213ENST00000554776 CD200R1Q8TD46 325 aa1.46□□□□□ -2.18
SCFD1-213ENST00000554776 CYGBQ8WWM9 190 aa1.46□□□□□ -2.18
SCFD1-213ENST00000554776 ACY3Q96HD9 319 aa1.46□□□□□ -2.18
SCFD1-213ENST00000554776 NSRP1Q9H0G5 558 aaKnown RBP1.46□□□□□ -2.18
SCFD1-213ENST00000554776 HDHD2Q9H0R4 259 aa1.46□□□□□ -2.18
SCFD1-213ENST00000554776 MED28Q9H204 178 aa1.46□□□□□ -2.18
SCFD1-213ENST00000554776 MRPS16Q9Y3D3 137 aaKnown RBP1.46□□□□□ -2.18
SCFD1-213ENST00000554776 SNX10Q9Y5X0 201 aa1.46□□□□□ -2.18
SCFD1-213ENST00000554776 MTCH2Q9Y6C9 303 aa1.46□□□□□ -2.18
SCFD1-213ENST00000554776 COL18A1P39060 1754 aa1.46□□□□□ -2.18
SCFD1-213ENST00000554776 PLXNB1O43157 2135 aa1.46□□□□□ -2.18
SCFD1-213ENST00000554776 ZNF638Q14966 1978 aaKnown RBP1.45□□□□□ -2.18
SCFD1-213ENST00000554776 C17orf98A8MV24 154 aa1.45□□□□□ -2.18
SCFD1-213ENST00000554776 ATP5G1P05496 136 aa1.45□□□□□ -2.18
SCFD1-213ENST00000554776 COX5BP10606 129 aa1.45□□□□□ -2.18
SCFD1-213ENST00000554776 LGALS3P17931 250 aaKnown RBP1.45□□□□□ -2.18
SCFD1-213ENST00000554776 IFNGR2P38484 337 aa1.45□□□□□ -2.18
SCFD1-213ENST00000554776 DAPP51397 102 aa1.45□□□□□ -2.18
SCFD1-213ENST00000554776 HERVK_113P63121 156 aa1.45□□□□□ -2.18
SCFD1-213ENST00000554776 TNFRSF9Q07011 255 aa1.45□□□□□ -2.18
SCFD1-213ENST00000554776 TMEM267Q0VDI3 215 aaPredicted RBP1.45□□□□□ -2.18
SCFD1-213ENST00000554776 FOXF1Q12946 379 aa1.45□□□□□ -2.18
SCFD1-213ENST00000554776 HTR4Q13639 388 aa1.45□□□□□ -2.18
SCFD1-213ENST00000554776 CLEC12BQ2HXU8 276 aa1.45□□□□□ -2.18
SCFD1-213ENST00000554776 TMEM31Q5JXX7 168 aa1.45□□□□□ -2.18
SCFD1-213ENST00000554776 DNM1P34Q6PK57 102 aa1.45□□□□□ -2.18
SCFD1-213ENST00000554776 IQCF2Q8IXL9 164 aa1.45□□□□□ -2.18
SCFD1-213ENST00000554776 NATD1Q8N6N6 113 aa1.45□□□□□ -2.18
SCFD1-213ENST00000554776 CCDC112Q8NEF3 446 aa1.45□□□□□ -2.18
SCFD1-213ENST00000554776 OR2V1Q8NHB1 315 aa1.45□□□□□ -2.18
SCFD1-213ENST00000554776 ABHD14BQ96IU4 210 aa1.45□□□□□ -2.18
SCFD1-213ENST00000554776 TIPINQ9BVW5 301 aa1.45□□□□□ -2.18
SCFD1-213ENST00000554776 PARVAQ9NVD7 372 aa1.45□□□□□ -2.18
SCFD1-213ENST00000554776 VPREB3Q9UKI3 123 aa1.45□□□□□ -2.18
SCFD1-213ENST00000554776 TP53TG1Q9Y2A0 90 aa1.45□□□□□ -2.18
SCFD1-213ENST00000554776 HDGFL3Q9Y3E1 203 aa1.45□□□□□ -2.18
SCFD1-213ENST00000554776 RIMS2Q9UQ26 1411 aa1.45□□□□□ -2.18
SCFD1-213ENST00000554776 DOCK6Q96HP0 2047 aa1.44□□□□□ -2.18
SCFD1-213ENST00000554776 HIVEP2P31629 2446 aa1.44□□□□□ -2.18
SCFD1-213ENST00000554776 LINC00862A6NCI5 91 aa1.44□□□□□ -2.18
SCFD1-213ENST00000554776 H3BSA7 217 aa1.44□□□□□ -2.18
SCFD1-213ENST00000554776 TP53I11O14683 189 aa1.44□□□□□ -2.18
SCFD1-213ENST00000554776 STX10O60499 249 aa1.44□□□□□ -2.18
SCFD1-213ENST00000554776 STK16O75716 305 aa1.44□□□□□ -2.18
SCFD1-213ENST00000554776 PSMG1O95456 288 aa1.44□□□□□ -2.18
SCFD1-213ENST00000554776 LINC00614P0C842 121 aa1.44□□□□□ -2.18
SCFD1-213ENST00000554776 CDK2P24941 298 aa1.44□□□□□ -2.18
SCFD1-213ENST00000554776 HSPA9P38646 679 aaKnown RBP1.44□□□□□ -2.18
SCFD1-213ENST00000554776 OR1E2P47887 323 aa1.44□□□□□ -2.18
SCFD1-213ENST00000554776 H2BFSP57053 126 aa1.44□□□□□ -2.18
SCFD1-213ENST00000554776 DAD1P61803 113 aa1.44□□□□□ -2.18
SCFD1-213ENST00000554776 SLC35A2P78381 396 aa1.44□□□□□ -2.18
SCFD1-213ENST00000554776 MEF2BQ02080 365 aaPredicted RBP1.44□□□□□ -2.18
SCFD1-213ENST00000554776 LRRC26Q2I0M4 334 aa1.44□□□□□ -2.18
SCFD1-213ENST00000554776 LCN8Q6JVE9 175 aa1.44□□□□□ -2.18
SCFD1-213ENST00000554776 FAM151BQ6UXP7 276 aa1.44□□□□□ -2.18
SCFD1-213ENST00000554776 SDIM1Q6ZPB5 146 aa1.44□□□□□ -2.18
SCFD1-213ENST00000554776 TMPPEQ6ZT21 453 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms