RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 BCL6BQ8N143 479 aaPredicted RBP9.94□□□□□ -0.82
SHMT2-209ENST00000553949 Q8N402 240 aa9.94□□□□□ -0.82
SHMT2-209ENST00000553949 MFSD4AQ8N468 514 aa9.94□□□□□ -0.82
SHMT2-209ENST00000553949 LINC00311Q8N616 119 aa9.94□□□□□ -0.82
SHMT2-209ENST00000553949 OR2AK2Q8NG84 335 aa9.94□□□□□ -0.82
SHMT2-209ENST00000553949 OR5AP2Q8NGF4 316 aa9.94□□□□□ -0.82
SHMT2-209ENST00000553949 OR10X1Q8NGY0 326 aa9.94□□□□□ -0.82
SHMT2-209ENST00000553949 CT45A3Q8NHU0 189 aa9.94□□□□□ -0.82
SHMT2-209ENST00000553949 C22orf15Q8WYQ4 148 aa9.94□□□□□ -0.82
SHMT2-209ENST00000553949 GINS4Q9BRT9 223 aa9.94□□□□□ -0.82
SHMT2-209ENST00000553949 ABHD14AQ9BUJ0 271 aa9.94□□□□□ -0.82
SHMT2-209ENST00000553949 SRRQ9GZT4 340 aa9.94□□□□□ -0.82
SHMT2-209ENST00000553949 TOLLIPQ9H0E2 274 aa9.94□□□□□ -0.82
SHMT2-209ENST00000553949 PARP12Q9H0J9 701 aaKnown RBP9.94□□□□□ -0.82
SHMT2-209ENST00000553949 MMP28Q9H239 520 aa9.94□□□□□ -0.82
SHMT2-209ENST00000553949 AKIP1Q9NQ31 210 aa9.94□□□□□ -0.82
SHMT2-209ENST00000553949 NECAP2Q9NVZ3 263 aa9.94□□□□□ -0.82
SHMT2-209ENST00000553949 RDH8Q9NYR8 311 aa9.94□□□□□ -0.82
SHMT2-209ENST00000553949 TBL2Q9Y4P3 447 aaKnown RBP9.94□□□□□ -0.82
SHMT2-209ENST00000553949 A0A0U1RQK1 487 aa9.93□□□□□ -0.82
SHMT2-209ENST00000553949 BUB1B-PAK6H3BSN5 160 aa9.93□□□□□ -0.82
SHMT2-209ENST00000553949 ITGB1BP1O14713 200 aa9.93□□□□□ -0.82
SHMT2-209ENST00000553949 PMP2P02689 132 aa9.93□□□□□ -0.82
SHMT2-209ENST00000553949 HTR1DP28221 377 aa9.93□□□□□ -0.82
SHMT2-209ENST00000553949 HRH1P35367 487 aa9.93□□□□□ -0.82
SHMT2-209ENST00000553949 OR3A3P47888 321 aa9.93□□□□□ -0.82
SHMT2-209ENST00000553949 SCGB2A2Q13296 93 aa9.93□□□□□ -0.82
SHMT2-209ENST00000553949 CDK10Q15131 360 aa9.93□□□□□ -0.82
SHMT2-209ENST00000553949 LDLRAD2Q5SZI1 272 aa9.93□□□□□ -0.82
SHMT2-209ENST00000553949 MINOS1Q5TGZ0 78 aa9.93□□□□□ -0.82
SHMT2-209ENST00000553949 SLC25A48Q6ZT89 311 aaKnown RBP9.93□□□□□ -0.82
SHMT2-209ENST00000553949 LHFPL4Q7Z7J7 247 aa9.93□□□□□ -0.82
SHMT2-209ENST00000553949 H1FOOQ8IZA3 346 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-209ENST00000553949 TMEM229BQ8NBD8 167 aa9.93□□□□□ -0.82
SHMT2-209ENST00000553949 OR5H2Q8NGV7 314 aa9.93□□□□□ -0.82
SHMT2-209ENST00000553949 C17orf50Q8WW18 174 aa9.93□□□□□ -0.82
SHMT2-209ENST00000553949 EDARADDQ8WWZ3 215 aa9.93□□□□□ -0.82
SHMT2-209ENST00000553949 CREB3L1Q96BA8 519 aa9.93□□□□□ -0.82
SHMT2-209ENST00000553949 AJUBAQ96IF1 538 aa9.93□□□□□ -0.82
SHMT2-209ENST00000553949 THAP7Q9BT49 309 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-209ENST00000553949 C11orf54Q9H0W9 315 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-209ENST00000553949 AMMECR1Q9Y4X0 333 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-209ENST00000553949 MINOS1-NBL1R4GNA1 71 aa9.93□□□□□ -0.82
SHMT2-209ENST00000553949 LEUTXA8MZ59 168 aa9.92□□□□□ -0.82
SHMT2-209ENST00000553949 ZNF736B4DX44 427 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-209ENST00000553949 LY6LH3BQJ8 138 aa9.92□□□□□ -0.82
SHMT2-209ENST00000553949 ST8SIA5O15466 376 aa9.92□□□□□ -0.82
SHMT2-209ENST00000553949 LANCL1O43813 399 aa9.92□□□□□ -0.82
SHMT2-209ENST00000553949 FAM157CP0CG43 387 aa9.92□□□□□ -0.82
SHMT2-209ENST00000553949 OR5H8P0DN80 308 aa9.92□□□□□ -0.82
SHMT2-209ENST00000553949 NFYAP23511 347 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-209ENST00000553949 FCGR2CP31995 323 aa9.92□□□□□ -0.82
SHMT2-209ENST00000553949 RFX2P48378 723 aa9.92□□□□□ -0.82
SHMT2-209ENST00000553949 TAS2R19P59542 299 aa9.92□□□□□ -0.82
SHMT2-209ENST00000553949 ACTBL2Q562R1 376 aa9.92□□□□□ -0.82
SHMT2-209ENST00000553949 OVCH2Q7RTZ1 564 aa9.92□□□□□ -0.82
SHMT2-209ENST00000553949 GDPD1Q8N9F7 314 aa9.92□□□□□ -0.82
SHMT2-209ENST00000553949 S100ZQ8WXG8 99 aa9.92□□□□□ -0.82
SHMT2-209ENST00000553949 TRIM63Q969Q1 353 aa9.92□□□□□ -0.82
SHMT2-209ENST00000553949 MALSU1Q96EH3 234 aa9.92□□□□□ -0.82
SHMT2-209ENST00000553949 IFI27L2Q9H2X8 130 aa9.92□□□□□ -0.82
SHMT2-209ENST00000553949 TAS2R8Q9NYW2 309 aa9.92□□□□□ -0.82
SHMT2-209ENST00000553949 EHFQ9NZC4 300 aa9.92□□□□□ -0.82
SHMT2-209ENST00000553949 DPM3Q9P2X0 92 aa9.92□□□□□ -0.82
SHMT2-209ENST00000553949 ZNF107Q9UII5 783 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-209ENST00000553949 FAM96BQ9Y3D0 163 aa9.92□□□□□ -0.82
SHMT2-209ENST00000553949 MTORP42345 2549 aa9.92□□□□□ -0.82
SHMT2-209ENST00000553949 FN1P02751 2386 aaKnown RBP9.91□□□□□ -0.82
SHMT2-209ENST00000553949 MDFIC2A0A1B0GVS7 189 aa9.91□□□□□ -0.82
SHMT2-209ENST00000553949 TUSC2O75896 110 aa9.91□□□□□ -0.82
SHMT2-209ENST00000553949 CD74P04233 296 aa9.91□□□□□ -0.82
SHMT2-209ENST00000553949 CD3DP04234 171 aa9.91□□□□□ -0.82
SHMT2-209ENST00000553949 CSF1P09603 554 aa9.91□□□□□ -0.82
SHMT2-209ENST00000553949 TBPP20226 339 aa9.91□□□□□ -0.82
SHMT2-209ENST00000553949 IL3RAP26951 378 aa9.91□□□□□ -0.82
SHMT2-209ENST00000553949 CEACAM3P40198 252 aa9.91□□□□□ -0.82
SHMT2-209ENST00000553949 RAB7AP51149 207 aa9.91□□□□□ -0.82
SHMT2-209ENST00000553949 DYRK1AQ13627 763 aa9.91□□□□□ -0.82
SHMT2-209ENST00000553949 SSX2Q16385 188 aa9.91□□□□□ -0.82
SHMT2-209ENST00000553949 DEFB112Q30KQ8 113 aa9.91□□□□□ -0.82
SHMT2-209ENST00000553949 VAX1Q5SQQ9 334 aa9.91□□□□□ -0.82
SHMT2-209ENST00000553949 TPTE2P1Q5T6R2 138 aa9.91□□□□□ -0.82
SHMT2-209ENST00000553949 LYG1Q8N1E2 194 aa9.91□□□□□ -0.82
SHMT2-209ENST00000553949 DYNAPQ8N1N2 210 aa9.91□□□□□ -0.82
SHMT2-209ENST00000553949 SDHCQ99643 169 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-209ENST00000553949 SLC6A7Q99884 636 aa9.91□□□□□ -0.82
SHMT2-209ENST00000553949 AGMATQ9BSE5 352 aa9.91□□□□□ -0.82
SHMT2-209ENST00000553949 TINAGL1Q9GZM7 467 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-209ENST00000553949 OR2W1Q9Y3N9 320 aa9.91□□□□□ -0.82
SHMT2-209ENST00000553949 NSD1Q96L73 2696 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-209ENST00000553949 ANKRD20A5PA0PJZ0 165 aa9.9□□□□□ -0.82
SHMT2-209ENST00000553949 M0QYG6 137 aa9.9□□□□□ -0.82
SHMT2-209ENST00000553949 FBP1P09467 338 aa9.9□□□□□ -0.82
SHMT2-209ENST00000553949 OR8U9P0C7N5 309 aa9.9□□□□□ -0.82
SHMT2-209ENST00000553949 AADACP22760 399 aa9.9□□□□□ -0.82
SHMT2-209ENST00000553949 PAX6P26367 422 aa9.9□□□□□ -0.82
SHMT2-209ENST00000553949 ZNF137PP52743 207 aa9.9□□□□□ -0.82
SHMT2-209ENST00000553949 BAK1Q16611 211 aa9.9□□□□□ -0.82
SHMT2-209ENST00000553949 TUSC1Q2TAM9 212 aa9.9□□□□□ -0.82
SHMT2-209ENST00000553949 RNASE10Q5GAN6 216 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms